RNA–Protein interactions for RNA: YNR038W

DBP6, Transcript of Essential protein involved in ribosome biogenesis, yeast

Gene DBP6, Length 1,890 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBP6	YNR038W	PAC2	P39937	518 aa		2.71	□□□□□ -1.98
DBP6	YNR038W	ARG2	P40360	574 aa		2.71	□□□□□ -1.98
DBP6	YNR038W	HXT16	P47185	567 aa		2.71	□□□□□ -1.98
DBP6	YNR038W	MTR3	P48240	250 aa	Predicted RBP	2.71	□□□□□ -1.98
DBP6	YNR038W	CTR1	P49573	406 aa		2.71	□□□□□ -1.98
DBP6	YNR038W	RLP7	P40693	322 aa	Known RBP	2.7	□□□□□ -1.98
DBP6	YNR038W	GLO1	P50107	326 aa		2.7	□□□□□ -1.98
DBP6	YNR038W	ZDS1	P50111	915 aa	Known RBP	2.7	□□□□□ -1.98
DBP6	YNR038W	FHN1	P53279	174 aa		2.7	□□□□□ -1.98
DBP6	YNR038W	TAF8	Q03750	510 aa		2.7	□□□□□ -1.98
DBP6	YNR038W	YDR514C	Q04408	483 aa		2.7	□□□□□ -1.98
DBP6	YNR038W	OSH2	Q12451	1283 aa		2.7	□□□□□ -1.98
DBP6	YNR038W	HSP60	P19882	572 aa	Known RBP	2.69	□□□□□ -1.98
DBP6	YNR038W	PAN2	P53010	1115 aa	Predicted RBP	2.69	□□□□□ -1.98
DBP6	YNR038W	WRS1	Q12109	432 aa	Known RBP	2.69	□□□□□ -1.98
DBP6	YNR038W	CIT1	P00890	479 aa		2.69	□□□□□ -1.98
DBP6	YNR038W	ORC2	P32833	620 aa		2.69	□□□□□ -1.98
DBP6	YNR038W	LYS9	P38999	446 aa		2.69	□□□□□ -1.98
DBP6	YNR038W	ALG2	P43636	503 aa		2.69	□□□□□ -1.98
DBP6	YNR038W	MRK1	P50873	501 aa		2.69	□□□□□ -1.98
DBP6	YNR038W	MTL1	P53214	551 aa		2.69	□□□□□ -1.98
DBP6	YNR038W	ATG4	P53867	494 aa		2.69	□□□□□ -1.98
DBP6	YNR038W	SEC5	P89102	971 aa		2.69	□□□□□ -1.98
DBP6	YNR038W	CTK1	Q03957	528 aa	Known RBP	2.69	□□□□□ -1.98
DBP6	YNR038W	YDL124W	Q07551	312 aa	Known RBP	2.69	□□□□□ -1.98
DBP6	YNR038W	APL2	P36000	726 aa	Predicted RBP	2.68	□□□□□ -1.98
DBP6	YNR038W	YHR112C	P38716	378 aa		2.68	□□□□□ -1.98
DBP6	YNR038W	FMO1	P38866	432 aa		2.68	□□□□□ -1.98
DBP6	YNR038W	NUP60	P39705	539 aa		2.68	□□□□□ -1.98
DBP6	YNR038W	SHR5	P41912	237 aa		2.68	□□□□□ -1.98
DBP6	YNR038W	TY4A-J	P47023	414 aa		2.68	□□□□□ -1.98
DBP6	YNR038W	PRP31	P49704	494 aa	Predicted RBP	2.68	□□□□□ -1.98
DBP6	YNR038W	YBP2	P53169	641 aa		2.68	□□□□□ -1.98
DBP6	YNR038W	SNU71	P53207	620 aa	Known RBP	2.68	□□□□□ -1.98
DBP6	YNR038W	MET7	Q08645	548 aa		2.68	□□□□□ -1.98
DBP6	YNR038W	DIF1	O13577	133 aa		2.67	□□□□□ -1.98
DBP6	YNR038W	VPS34	P22543	875 aa		2.67	□□□□□ -1.98
DBP6	YNR038W	YHR020W	P38708	688 aa	Known RBP	2.67	□□□□□ -1.98
DBP6	YNR038W	SFB3	P38810	929 aa		2.67	□□□□□ -1.98
DBP6	YNR038W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	2.67	□□□□□ -1.98	not detected
DBP6	YNR038W	HUL4	P40985	892 aa		2.67	□□□□□ -1.98
DBP6	YNR038W	ARG5,6	Q01217	863 aa		2.67	□□□□□ -1.98
DBP6	YNR038W	SEG1	Q04279	960 aa		2.67	□□□□□ -1.98
DBP6	YNR038W	RAD4	P14736	754 aa		2.67	□□□□□ -1.98
DBP6	YNR038W	ADE2	P21264	571 aa	Known RBP	2.67	□□□□□ -1.98
DBP6	YNR038W	MVD1	P32377	396 aa	Known RBP	2.67	□□□□□ -1.98
DBP6	YNR038W	SPC29	P33419	253 aa		2.67	□□□□□ -1.98
DBP6	YNR038W	PHO11	P35842	467 aa		2.67	□□□□□ -1.98
DBP6	YNR038W	BET3	P36149	193 aa		2.67	□□□□□ -1.98
DBP6	YNR038W	PHO12	P38693	467 aa		2.67	□□□□□ -1.98
DBP6	YNR038W	UBC9	P50623	157 aa	Predicted RBP	2.67	□□□□□ -1.98
DBP6	YNR038W	OSW1	Q08692	278 aa		2.67	□□□□□ -1.98
DBP6	YNR038W	TOM70	P07213	617 aa	Known RBP	2.66	□□□□□ -1.98
DBP6	YNR038W	HOM2	P13663	365 aa	Known RBP	2.66	□□□□□ -1.98
DBP6	YNR038W	TRZ1	P36159	838 aa	Predicted RBP	2.66	□□□□□ -1.98
DBP6	YNR038W	PAM1	P37304	830 aa	Known RBP	2.66	□□□□□ -1.98
DBP6	YNR038W	BNA3	P47039	444 aa	Known RBP	2.66	□□□□□ -1.98
DBP6	YNR038W	YGR125W	P53273	1036 aa		2.66	□□□□□ -1.98
DBP6	YNR038W	RIM13	Q03792	727 aa		2.66	□□□□□ -1.98
DBP6	YNR038W	YDR338C	Q05497	695 aa		2.66	□□□□□ -1.98
DBP6	YNR038W	MCM21	Q06675	368 aa		2.66	□□□□□ -1.98
DBP6	YNR038W	MLH3	Q12083	715 aa		2.66	□□□□□ -1.98
DBP6	YNR038W	HRP1	Q99383	534 aa	Known RBP	2.66	□□□□□ -1.98
DBP6	YNR038W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	2.65	□□□□□ -1.99	not detected
DBP6	YNR038W	THR1	P17423	357 aa	Known RBP	2.65	□□□□□ -1.99
DBP6	YNR038W	CCR4	P31384	837 aa	Known RBP	2.65	□□□□□ -1.99
DBP6	YNR038W	MUP3	P38734	546 aa		2.65	□□□□□ -1.99
DBP6	YNR038W	HMO1	Q03973	246 aa	Known RBP	2.65	□□□□□ -1.99
DBP6	YNR038W	RGC1	Q06108	1083 aa	Known RBP	2.65	□□□□□ -1.99
DBP6	YNR038W	FLC1	Q08967	793 aa		2.65	□□□□□ -1.99
DBP6	YNR038W	CLF1	Q12309	687 aa	Predicted RBP	2.65	□□□□□ -1.99
DBP6	YNR038W	ERG6	P25087	383 aa	Known RBP	2.64	□□□□□ -1.99
DBP6	YNR038W	MIP6	P38760	659 aa	Known RBP	2.64	□□□□□ -1.99
DBP6	YNR038W	LTP1	P40347	161 aa		2.64	□□□□□ -1.99
DBP6	YNR038W	CAN1	P04817	590 aa		2.63	□□□□□ -1.99
DBP6	YNR038W	FUB1	P25659	250 aa		2.63	□□□□□ -1.99
DBP6	YNR038W	APT2	P36973	181 aa		2.63	□□□□□ -1.99
DBP6	YNR038W	ALY2	P47029	1046 aa		2.63	□□□□□ -1.99
DBP6	YNR038W	TIM54	P47045	478 aa		2.63	□□□□□ -1.99
DBP6	YNR038W	YJL049W	P47048	450 aa		2.63	□□□□□ -1.99
DBP6	YNR038W	BNA2	P47125	453 aa		2.63	□□□□□ -1.99
DBP6	YNR038W	RTA1	P53047	317 aa		2.63	□□□□□ -1.99
DBP6	YNR038W	SLK19	Q08581	821 aa	Known RBP	2.63	□□□□□ -1.99
DBP6	YNR038W	ZRT2	Q12436	422 aa		2.63	□□□□□ -1.99
DBP6	YNR038W	PER1	P25625	357 aa		2.62	□□□□□ -1.99
DBP6	YNR038W	GMH1	P36125	273 aa		2.62	□□□□□ -1.99
DBP6	YNR038W	CRP1	P38845	465 aa	Known RBP	2.62	□□□□□ -1.99
DBP6	YNR038W	GET2	P40056	285 aa		2.62	□□□□□ -1.99
DBP6	YNR038W	GID8	P40208	455 aa		2.62	□□□□□ -1.99
DBP6	YNR038W	GAT1	P43574	510 aa		2.62	□□□□□ -1.99
DBP6	YNR038W	ORC4	P54791	529 aa		2.62	□□□□□ -1.99
DBP6	YNR038W	YLR149C	Q99296	730 aa		2.62	□□□□□ -1.99
DBP6	YNR038W	PEX1	P24004	1043 aa		2.62	□□□□□ -1.99
DBP6	YNR038W	SET3	P36124	751 aa		2.62	□□□□□ -1.99
DBP6	YNR038W	REC102	Q02721	264 aa		2.62	□□□□□ -1.99
DBP6	YNR038W	USV1	Q12132	391 aa		2.62	□□□□□ -1.99
DBP6	YNR038W	PGK1	P00560	416 aa	Known RBP	2.61	□□□□□ -1.99
DBP6	YNR038W	YUR1	P26725	428 aa		2.61	□□□□□ -1.99
DBP6	YNR038W	MTC2	P34246	357 aa		2.61	□□□□□ -1.99
DBP6	YNR038W	RSP5	P39940	809 aa	Known RBP	2.61	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 29.4 ms