RNA–Protein interactions for RNA: YLR132C

USB1, Transcript of Putative phosphodiesterase specific for U6 snRNA 3' end modification, yeastyeast

Gene USB1, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USB1YLR132C RPN10P38886 268 aaKnown RBP5.29□□□□□ -1.56
USB1YLR132C SHR5P41912 237 aa5.29□□□□□ -1.56
USB1YLR132C YJR142WP47173 342 aa5.29□□□□□ -1.56
USB1YLR132C RSC3Q06639 885 aa5.29□□□□□ -1.56
USB1YLR132C TRP4P07285 380 aaPredicted RBP5.28□□□□□ -1.56
USB1YLR132C RPL8AP17076 256 aaKnown RBP5.28□□□□□ -1.56
USB1YLR132C CYS3P31373 394 aaKnown RBP5.28□□□□□ -1.56
USB1YLR132C SEC21P32074 935 aaKnown RBP5.28□□□□□ -1.56
USB1YLR132C OAR1P35731 278 aa5.28□□□□□ -1.56
USB1YLR132C MOH1P38191 138 aa5.28□□□□□ -1.56
USB1YLR132C SDP1P40479 209 aa5.28□□□□□ -1.56
USB1YLR132C YNL193WP53870 558 aa5.28□□□□□ -1.56
USB1YLR132C YOL073CQ08232 322 aa5.28□□□□□ -1.56
USB1YLR132C CDC9P04819 755 aa5.27□□□□□ -1.57
USB1YLR132C ERG4P25340 473 aa5.27□□□□□ -1.57
USB1YLR132C YEL1P34225 687 aa5.27□□□□□ -1.57
USB1YLR132C MTC2P34246 357 aa5.27□□□□□ -1.57
USB1YLR132C SUL1P38359 859 aa5.27□□□□□ -1.57
USB1YLR132C YIL108WP40483 696 aaKnown RBP5.27□□□□□ -1.57
USB1YLR132C CAF16P43569 289 aa5.27□□□□□ -1.57
USB1YLR132C TAD1P53065 400 aa5.27□□□□□ -1.57
USB1YLR132C SDA1P53313 767 aaKnown RBP5.27□□□□□ -1.57
USB1YLR132C ERG5P54781 538 aa5.27□□□□□ -1.57
USB1YLR132C YKR011CQ02209 353 aa5.27□□□□□ -1.57
USB1YLR132C COG8Q04632 607 aa5.27□□□□□ -1.57
USB1YLR132C PRC1P00729 532 aa5.26□□□□□ -1.57
USB1YLR132C SRD1P09007 221 aa5.26□□□□□ -1.57
USB1YLR132C MEF1P25039 761 aa5.26□□□□□ -1.57
USB1YLR132C PER1P25625 357 aa5.26□□□□□ -1.57
USB1YLR132C KTR4P38131 464 aa5.26□□□□□ -1.57
USB1YLR132C ALY2P47029 1046 aa5.26□□□□□ -1.57
USB1YLR132C HDA1P53973 706 aa5.26□□□□□ -1.57
USB1YLR132C TRM13Q12383 476 aa5.26□□□□□ -1.57
USB1YLR132C DIF1O13577 133 aa5.25□□□□□ -1.57
USB1YLR132C RAD18P10862 487 aa5.25□□□□□ -1.57
USB1YLR132C TSR4P25040 408 aa5.25□□□□□ -1.57
USB1YLR132C CTF8P38877 133 aa5.25□□□□□ -1.57
USB1YLR132C DOT6P40059 670 aaKnown RBP5.25□□□□□ -1.57
USB1YLR132C RLP7P40693 322 aaKnown RBP5.25□□□□□ -1.57
USB1YLR132C PMT3P47190 753 aa5.25□□□□□ -1.57
USB1YLR132C SNP1Q00916 300 aaPredicted RBP5.25□□□□□ -1.57
USB1YLR132C DNF2Q12675 1612 aa5.25□□□□□ -1.57
USB1YLR132C SET5P38890 526 aaKnown RBP5.24□□□□□ -1.57
USB1YLR132C PEX19Q07418 342 aa5.24□□□□□ -1.57
USB1YLR132C TUB3P09734 445 aaKnown RBP5.23□□□□□ -1.57
USB1YLR132C HOG1P32485 435 aa5.23□□□□□ -1.57
USB1YLR132C YNR029CP53729 429 aaKnown RBP5.23□□□□□ -1.57
USB1YLR132C NHX1Q04121 633 aa5.23□□□□□ -1.57
USB1YLR132C MMS22Q06164 1454 aa5.23□□□□□ -1.57
USB1YLR132C TOP2P06786 1428 aaKnown RBP5.23□□□□□ -1.57
USB1YLR132C NUP145P49687 1317 aa5.23□□□□□ -1.57
USB1YLR132C TY1B-JR2P47100 1755 aaKnown RBP5.22□□□□□ -1.57
USB1YLR132C TY1B-ER2Q03619 1755 aa5.22□□□□□ -1.57
USB1YLR132C TY1B-MR1Q04214 1755 aa5.22□□□□□ -1.57
USB1YLR132C TY1B-MR2Q04670 1755 aaKnown RBP5.22□□□□□ -1.57
USB1YLR132C TY1B-LR1Q12088 1755 aaKnown RBP5.22□□□□□ -1.57
USB1YLR132C TY1B-NL1Q12112 1755 aa5.22□□□□□ -1.57
USB1YLR132C TY1B-GR1Q12141 1755 aa5.22□□□□□ -1.57
USB1YLR132C TY1B-BLQ12490 1755 aa5.22□□□□□ -1.57
USB1YLR132C DRS2P39524 1355 aa5.22□□□□□ -1.57
USB1YLR132C MCD4P36051 919 aa5.22□□□□□ -1.57
USB1YLR132C LRS4Q04087 347 aaKnown RBP5.22□□□□□ -1.57
USB1YLR132C YOR022CQ12204 715 aa5.22□□□□□ -1.57
USB1YLR132C TRM732Q03496 1420 aa5.22□□□□□ -1.57
USB1YLR132C NTE1Q04958 1679 aa5.21□□□□□ -1.57
USB1YLR132C VPS15P22219 1454 aa5.21□□□□□ -1.58
USB1YLR132C SFL1P20134 766 aa5.21□□□□□ -1.58
USB1YLR132C YCL002CP25565 263 aa5.21□□□□□ -1.58
USB1YLR132C CTF13P35203 478 aa5.21□□□□□ -1.58
USB1YLR132C HSL7P38274 827 aa5.21□□□□□ -1.58
USB1YLR132C YFL052WP43551 465 aa5.21□□□□□ -1.58
USB1YLR132C UBA2P52488 636 aa5.21□□□□□ -1.58
USB1YLR132C RNT1Q02555 471 aa5.21□□□□□ -1.58
USB1YLR132C CRR1Q05790 422 aa5.21□□□□□ -1.58
USB1YLR132C THI73Q07904 523 aa5.21□□□□□ -1.58
USB1YLR132C PCL2P25693 308 aa5.2□□□□□ -1.58
USB1YLR132C NGG1P32494 702 aa5.2□□□□□ -1.58
USB1YLR132C YGR237CP50089 785 aa5.2□□□□□ -1.58
USB1YLR132C NPY1P53164 384 aa5.2□□□□□ -1.58
USB1YLR132C YMR206WQ03695 313 aa5.2□□□□□ -1.58
USB1YLR132C OMS1Q06668 471 aa5.2□□□□□ -1.58
USB1YLR132C GUD1Q07729 489 aa5.2□□□□□ -1.58
USB1YLR132C YLR001CQ07895 862 aa5.2□□□□□ -1.58
USB1YLR132C HAL9Q12180 1030 aa5.2□□□□□ -1.58
USB1YLR132C GIN4Q12263 1142 aa5.2□□□□□ -1.58
USB1YLR132C SWM1Q12379 170 aa5.2□□□□□ -1.58
USB1YLR132C YBR182C-AQ8TGU6 64 aa5.2□□□□□ -1.58
USB1YLR132C NUP159P40477 1460 aa5.2□□□□□ -1.58
USB1YLR132C PPR1P07272 904 aaPredicted RBP5.19□□□□□ -1.58
USB1YLR132C ALG7P07286 448 aa5.19□□□□□ -1.58
USB1YLR132C PRP4P20053 465 aaKnown RBP5.19□□□□□ -1.58
USB1YLR132C GRX4P32642 244 aa5.19□□□□□ -1.58
USB1YLR132C YHR078WP38799 552 aa5.19□□□□□ -1.58
USB1YLR132C UBP12P39538 1254 aa5.19□□□□□ -1.58
USB1YLR132C PZF1P39933 429 aa5.19□□□□□ -1.58
USB1YLR132C TY4A-JP47023 414 aa5.19□□□□□ -1.58
USB1YLR132C STB4P50104 949 aa5.19□□□□□ -1.58
USB1YLR132C DUS1P53759 423 aaKnown RBP5.19□□□□□ -1.58
USB1YLR132C UME1Q03010 460 aa5.19□□□□□ -1.58
USB1YLR132C TRM11Q12463 433 aa5.19□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms