RNA–Protein interactions for RNA: YKR101W

SIR1, Transcript of Protein involved in silencing at mating-type loci HML and HMR, yeastyeast

Gene SIR1, Length 1,965 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIR1YKR101W EAF5P39995 279 aa5.47□□□□□ -1.53
SIR1YKR101W PUS2P53167 370 aa5.47□□□□□ -1.53
SIR1YKR101W YDR215CQ12240 137 aa5.47□□□□□ -1.53
SIR1YKR101W NSI1Q12457 570 aa5.47□□□□□ -1.53
SIR1YKR101W YCK2P23292 546 aaKnown RBP5.47□□□□□ -1.53
SIR1YKR101W BEM4P39011 633 aa5.47□□□□□ -1.53
SIR1YKR101W RNR4P49723 345 aaKnown RBP5.47□□□□□ -1.53
SIR1YKR101W HSF1P10961 833 aa5.46□□□□□ -1.54
SIR1YKR101W VID28P40547 921 aa5.46□□□□□ -1.54
SIR1YKR101W SAP185P40856 1058 aa5.46□□□□□ -1.54
SIR1YKR101W TAN1P53072 289 aaPredicted RBP5.46□□□□□ -1.54
SIR1YKR101W VPS30Q02948 557 aa5.46□□□□□ -1.54
SIR1YKR101W SSY1Q03770 852 aa5.46□□□□□ -1.54
SIR1YKR101W YLR407WQ06070 228 aa5.46□□□□□ -1.54
SIR1YKR101W THI72Q08579 599 aa5.46□□□□□ -1.54
SIR1YKR101W SEC18P18759 758 aaKnown RBP5.46□□□□□ -1.54
SIR1YKR101W HOP1P20050 605 aa5.46□□□□□ -1.54
SIR1YKR101W MIP6P38760 659 aaKnown RBP5.46□□□□□ -1.54
SIR1YKR101W PAP2P53632 584 aaKnown RBP5.46□□□□□ -1.54
SIR1YKR101W NOP15P53927 220 aaPredicted RBP5.46□□□□□ -1.54
SIR1YKR101W PSR2Q07949 397 aa5.46□□□□□ -1.54
SIR1YKR101W CWC2Q12046 339 aaPredicted RBP5.46□□□□□ -1.54
SIR1YKR101W CMP2P14747 604 aa5.45□□□□□ -1.54
SIR1YKR101W AKL1P38080 1108 aaKnown RBP5.45□□□□□ -1.54
SIR1YKR101W SAF1P38352 637 aa5.45□□□□□ -1.54
SIR1YKR101W ZRG8P40021 1076 aa5.45□□□□□ -1.54
SIR1YKR101W SSY5P47002 699 aa5.45□□□□□ -1.54
SIR1YKR101W WHI4Q07655 649 aaKnown RBP5.45□□□□□ -1.54
SIR1YKR101W YPL277CQ08989 487 aa5.45□□□□□ -1.54
SIR1YKR101W SSH4P32343 579 aa5.44□□□□□ -1.54
SIR1YKR101W HXT4P32467 576 aa5.44□□□□□ -1.54
SIR1YKR101W PGM1P33401 570 aaKnown RBP5.44□□□□□ -1.54
SIR1YKR101W YHR202WP38887 602 aa5.44□□□□□ -1.54
SIR1YKR101W HIM1Q06674 414 aa5.44□□□□□ -1.54
SIR1YKR101W NGL1Q08213 363 aaKnown RBP5.44□□□□□ -1.54
SIR1YKR101W SSP2Q08646 371 aa5.44□□□□□ -1.54
SIR1YKR101W VTS1Q08831 523 aaKnown RBP RIP-Chip data5.44□□□□□ -1.54not detected
SIR1YKR101W NUR1Q12066 484 aa5.44□□□□□ -1.54
SIR1YKR101W GCD1P09032 578 aaPredicted RBP5.44□□□□□ -1.54
SIR1YKR101W KIN2P13186 1147 aaKnown RBP5.44□□□□□ -1.54
SIR1YKR101W YIL092WP40497 633 aa5.44□□□□□ -1.54
SIR1YKR101W IRC5P43610 853 aa5.44□□□□□ -1.54
SIR1YKR101W ASK10P48361 1146 aa5.44□□□□□ -1.54
SIR1YKR101W YPS7Q06325 596 aa5.44□□□□□ -1.54
SIR1YKR101W CTF8P38877 133 aa5.43□□□□□ -1.54
SIR1YKR101W TRS130Q03660 1102 aa5.43□□□□□ -1.54
SIR1YKR101W RSM24Q03976 319 aa5.43□□□□□ -1.54
SIR1YKR101W HLR1Q04429 423 aa5.43□□□□□ -1.54
SIR1YKR101W TCB3Q03640 1545 aaKnown RBP5.42□□□□□ -1.54
SIR1YKR101W RPN12P32496 274 aa5.42□□□□□ -1.54
SIR1YKR101W PET309P32522 965 aaPredicted RBP5.42□□□□□ -1.54
SIR1YKR101W IES1P43579 692 aa5.42□□□□□ -1.54
SIR1YKR101W TEP1P53916 434 aa5.42□□□□□ -1.54
SIR1YKR101W LPX1Q12405 387 aaKnown RBP5.42□□□□□ -1.54
SIR1YKR101W MSM1P22438 575 aa5.42□□□□□ -1.54
SIR1YKR101W IMG2P25642 146 aaPredicted RBP5.42□□□□□ -1.54
SIR1YKR101W BEM3P32873 1128 aa5.42□□□□□ -1.54
SIR1YKR101W SDP1P40479 209 aa5.42□□□□□ -1.54
SIR1YKR101W MND2P40577 368 aa5.42□□□□□ -1.54
SIR1YKR101W YOL087CQ99247 1116 aa5.42□□□□□ -1.54
SIR1YKR101W SPE1P08432 466 aa5.41□□□□□ -1.54
SIR1YKR101W PHO81P17442 1178 aa5.41□□□□□ -1.54
SIR1YKR101W PHO3P24031 467 aa5.41□□□□□ -1.54
SIR1YKR101W MF(ALPHA)2P32435 120 aa5.41□□□□□ -1.54
SIR1YKR101W MPE1P35728 441 aaKnown RBP5.41□□□□□ -1.54
SIR1YKR101W YHR078WP38799 552 aa5.41□□□□□ -1.54
SIR1YKR101W SAK1P38990 1142 aa5.41□□□□□ -1.54
SIR1YKR101W UBA2P52488 636 aa5.41□□□□□ -1.54
SIR1YKR101W GPD1Q00055 391 aaKnown RBP5.41□□□□□ -1.54
SIR1YKR101W MCA1Q08601 432 aa5.41□□□□□ -1.54
SIR1YKR101W YLR122CQ12312 125 aa5.41□□□□□ -1.54
SIR1YKR101W RPS17AP02407 136 aaKnown RBP5.4□□□□□ -1.54
SIR1YKR101W RPS17BP14127 136 aaKnown RBP5.4□□□□□ -1.54
SIR1YKR101W MSB1P21339 1137 aaKnown RBP5.4□□□□□ -1.54
SIR1YKR101W SHM2P37291 469 aaKnown RBP5.4□□□□□ -1.54
SIR1YKR101W BFA1P47113 574 aa5.4□□□□□ -1.54
SIR1YKR101W PUS4P48567 403 aaKnown RBP5.4□□□□□ -1.54
SIR1YKR101W HOL1P53389 586 aa5.4□□□□□ -1.54
SIR1YKR101W GTR1Q00582 310 aa5.4□□□□□ -1.54
SIR1YKR101W MTD1Q02046 320 aaKnown RBP5.4□□□□□ -1.54
SIR1YKR101W RCR2Q03446 210 aaKnown RBP5.4□□□□□ -1.54
SIR1YKR101W CYC1P00044 109 aaPredicted RBP5.4□□□□□ -1.55
SIR1YKR101W GAL10P04397 699 aa5.4□□□□□ -1.55
SIR1YKR101W CHS2P14180 963 aa5.4□□□□□ -1.55
SIR1YKR101W MCM10P32354 571 aa5.4□□□□□ -1.55
SIR1YKR101W STE14P32584 239 aa5.4□□□□□ -1.55
SIR1YKR101W YKR075CP36155 307 aa5.4□□□□□ -1.55
SIR1YKR101W SRP68P38687 599 aaKnown RBP5.4□□□□□ -1.55
SIR1YKR101W SPC72P39723 622 aa5.4□□□□□ -1.55
SIR1YKR101W SET2P46995 733 aaKnown RBP5.4□□□□□ -1.55
SIR1YKR101W MUS81Q04149 632 aaPredicted RBP5.4□□□□□ -1.55
SIR1YKR101W STP4Q07351 490 aa5.4□□□□□ -1.55
SIR1YKR101W RTK1Q12100 620 aaPredicted RBP5.4□□□□□ -1.55
SIR1YKR101W RRI2Q12348 645 aa5.4□□□□□ -1.55
SIR1YKR101W ADH4P10127 382 aa5.39□□□□□ -1.55
SIR1YKR101W GFA1P14742 717 aaKnown RBP5.39□□□□□ -1.55
SIR1YKR101W PRP4P20053 465 aaKnown RBP5.39□□□□□ -1.55
SIR1YKR101W IME1P21190 360 aa5.39□□□□□ -1.55
SIR1YKR101W STL1P39932 569 aa5.39□□□□□ -1.55
SIR1YKR101W PFA3P42836 336 aa5.39□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms