RNA–Protein interactions for RNA: YKL085W

MDH1, Transcript of Mitochondrial malate dehydrogenase, yeastyeast

Gene MDH1, Length 1,005 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MDH1YKL085W SCD6P45978 349 aaKnown RBP RIP-Chip data7.16□□□□□ -1.26not detected
MDH1YKL085W TAF1P46677 1066 aa7.16□□□□□ -1.26
MDH1YKL085W CUE3P53137 624 aaKnown RBP7.16□□□□□ -1.26
MDH1YKL085W TMN2Q04562 672 aa7.16□□□□□ -1.26
MDH1YKL085W RPS9AO13516 197 aaKnown RBP7.15□□□□□ -1.26
MDH1YKL085W PCK1P10963 549 aa7.15□□□□□ -1.26
MDH1YKL085W FUS1P11710 512 aa7.15□□□□□ -1.26
MDH1YKL085W TAF13P11747 167 aa7.15□□□□□ -1.26
MDH1YKL085W SIR1P21691 654 aa7.15□□□□□ -1.26
MDH1YKL085W URA1P28272 314 aaPredicted RBP7.15□□□□□ -1.26
MDH1YKL085W UBP13P38187 747 aa7.15□□□□□ -1.26
MDH1YKL085W RFC5P38251 354 aa7.15□□□□□ -1.26
MDH1YKL085W PSP1P50896 841 aaKnown RBP7.15□□□□□ -1.26
MDH1YKL085W RTC4P53850 401 aa7.15□□□□□ -1.26
MDH1YKL085W ELG1Q12050 791 aa7.15□□□□□ -1.26
MDH1YKL085W ASP3-2P0CX77 362 aa7.14□□□□□ -1.27
MDH1YKL085W ASP3-3P0CX78 362 aa7.14□□□□□ -1.27
MDH1YKL085W ASP3-4P0CX79 362 aa7.14□□□□□ -1.27
MDH1YKL085W ASP3-1P0CZ17 362 aa7.14□□□□□ -1.27
MDH1YKL085W VPS3P23643 1011 aa7.14□□□□□ -1.27
MDH1YKL085W KIP1P28742 1111 aa7.14□□□□□ -1.27
MDH1YKL085W FMO1P38866 432 aa7.14□□□□□ -1.27
MDH1YKL085W TUB4P53378 473 aa7.14□□□□□ -1.27
MDH1YKL085W CWC24P53769 259 aa7.14□□□□□ -1.27
MDH1YKL085W SEC5P89102 971 aa7.14□□□□□ -1.27
MDH1YKL085W HER2Q03557 464 aa7.14□□□□□ -1.27
MDH1YKL085W YPQ1Q12010 308 aa7.14□□□□□ -1.27
MDH1YKL085W YPL150WQ12152 901 aa7.14□□□□□ -1.27
MDH1YKL085W HRT3Q12347 344 aa7.14□□□□□ -1.27
MDH1YKL085W CSF1Q12150 2958 aa7.13□□□□□ -1.27
MDH1YKL085W RNR2P09938 399 aaKnown RBP7.13□□□□□ -1.27
MDH1YKL085W SSB1P11484 613 aaKnown RBP7.13□□□□□ -1.27
MDH1YKL085W MCM3P24279 971 aaKnown RBP7.13□□□□□ -1.27
MDH1YKL085W PPS1P38148 807 aa7.13□□□□□ -1.27
MDH1YKL085W NEM1P38757 446 aa7.13□□□□□ -1.27
MDH1YKL085W MED6P38782 295 aa7.13□□□□□ -1.27
MDH1YKL085W SSB2P40150 613 aaKnown RBP7.13□□□□□ -1.27
MDH1YKL085W VTC2P43585 828 aa7.13□□□□□ -1.27
MDH1YKL085W UTP14Q04500 899 aaKnown RBP7.13□□□□□ -1.27
MDH1YKL085W BSP1Q06604 576 aa7.13□□□□□ -1.27
MDH1YKL085W YPR084WQ06821 456 aa7.13□□□□□ -1.27
MDH1YKL085W YPL277CQ08989 487 aa7.13□□□□□ -1.27
MDH1YKL085W SGT2Q12118 346 aaKnown RBP7.13□□□□□ -1.27
MDH1YKL085W STB3Q12427 513 aa7.13□□□□□ -1.27
MDH1YKL085W MPD2Q99316 277 aa7.13□□□□□ -1.27
MDH1YKL085W CPA2P03965 1118 aaKnown RBP7.12□□□□□ -1.27
MDH1YKL085W DAL7P21826 554 aa7.12□□□□□ -1.27
MDH1YKL085W PPH22P23595 377 aa7.12□□□□□ -1.27
MDH1YKL085W MSH2P25847 964 aa7.12□□□□□ -1.27
MDH1YKL085W RAD16P31244 790 aa7.12□□□□□ -1.27
MDH1YKL085W SLD2P34252 453 aa7.12□□□□□ -1.27
MDH1YKL085W YBR056WP38081 501 aa7.12□□□□□ -1.27
MDH1YKL085W AGP2P38090 596 aa7.12□□□□□ -1.27
MDH1YKL085W YBL036CP38197 257 aa7.12□□□□□ -1.27
MDH1YKL085W RGD1P38339 666 aa7.12□□□□□ -1.27
MDH1YKL085W NMD3P38861 518 aaKnown RBP7.12□□□□□ -1.27
MDH1YKL085W VPS25P47142 202 aa7.12□□□□□ -1.27
MDH1YKL085W CCM1P48237 864 aaPredicted RBP7.12□□□□□ -1.27
MDH1YKL085W PIL1P53252 339 aaKnown RBP7.12□□□□□ -1.27
MDH1YKL085W UTP8P53276 713 aaKnown RBP7.12□□□□□ -1.27
MDH1YKL085W FAR11P53917 953 aa7.12□□□□□ -1.27
MDH1YKL085W NIS1P53939 407 aa7.12□□□□□ -1.27
MDH1YKL085W RPL34AP87262 121 aaPredicted RBP7.12□□□□□ -1.27
MDH1YKL085W TIF35Q04067 274 aaKnown RBP7.12□□□□□ -1.27
MDH1YKL085W PHO8P11491 566 aa7.11□□□□□ -1.27
MDH1YKL085W PGI1P12709 554 aaKnown RBP7.11□□□□□ -1.27
MDH1YKL085W SPT23P35210 1082 aa7.11□□□□□ -1.27
MDH1YKL085W TTI1P36097 1038 aa7.11□□□□□ -1.27
MDH1YKL085W YKR051WP36142 418 aa7.11□□□□□ -1.27
MDH1YKL085W NPP2P39997 493 aa7.11□□□□□ -1.27
MDH1YKL085W GYP8P43570 497 aa7.11□□□□□ -1.27
MDH1YKL085W HSH155P49955 971 aaKnown RBP7.11□□□□□ -1.27
MDH1YKL085W NOP13P53883 403 aaKnown RBP RIP-Chip data7.11□□□□□ -1.27not detected
MDH1YKL085W HIS4P00815 799 aaKnown RBP7.1□□□□□ -1.27
MDH1YKL085W RPL19AP0CX82 189 aaKnown RBP7.1□□□□□ -1.27
MDH1YKL085W RPL19BP0CX83 189 aaPredicted RBP7.1□□□□□ -1.27
MDH1YKL085W MTF1P14908 341 aaKnown RBP7.1□□□□□ -1.27
MDH1YKL085W BTT1P40314 149 aaPredicted RBP7.1□□□□□ -1.27
MDH1YKL085W LCB2P40970 561 aa7.1□□□□□ -1.27
MDH1YKL085W IES1P43579 692 aa7.1□□□□□ -1.27
MDH1YKL085W RMD8P43620 662 aa7.1□□□□□ -1.27
MDH1YKL085W DAS1P47005 663 aa7.1□□□□□ -1.27
MDH1YKL085W RSM26P47141 266 aa7.1□□□□□ -1.27
MDH1YKL085W ALT1P52893 592 aa7.1□□□□□ -1.27
MDH1YKL085W NBP1P52919 319 aaPredicted RBP7.1□□□□□ -1.27
MDH1YKL085W COG8Q04632 607 aa7.1□□□□□ -1.27
MDH1YKL085W CET1O13297 549 aaPredicted RBP7.09□□□□□ -1.27
MDH1YKL085W VMA1P17255 1071 aaKnown RBP7.09□□□□□ -1.27
MDH1YKL085W MUD1P32605 298 aaKnown RBP7.09□□□□□ -1.27
MDH1YKL085W TSA1P34760 196 aaKnown RBP7.09□□□□□ -1.27
MDH1YKL085W MAL33P38157 468 aa7.09□□□□□ -1.27
MDH1YKL085W CHS6P40955 746 aa7.09□□□□□ -1.27
MDH1YKL085W YNL011CP53980 444 aa7.09□□□□□ -1.27
MDH1YKL085W NOB1Q08444 459 aaKnown RBP7.09□□□□□ -1.27
MDH1YKL085W SAM3Q08986 587 aa7.09□□□□□ -1.27
MDH1YKL085W CHS1P08004 1131 aa7.08□□□□□ -1.28
MDH1YKL085W KEX1P09620 729 aa7.08□□□□□ -1.28
MDH1YKL085W TRK2P28584 889 aa7.08□□□□□ -1.28
MDH1YKL085W GPI10P30777 616 aa7.08□□□□□ -1.28
MDH1YKL085W GUT1P32190 709 aa7.08□□□□□ -1.28
Retrieved 100 of 5,963 RNA–protein pairs in 27.6 ms