RNA–Protein interactions for RNA: YKL025C

PAN3, Transcript of Essential subunit of the Pan2p-Pan3p poly(A)-ribonuclease complex, yeast

Gene PAN3, Length 2,040 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAN3	YKL025C	YLR040C	Q07988	224 aa		2.66	□□□□□ -1.98
PAN3	YKL025C	ADR1	P07248	1323 aa		2.65	□□□□□ -1.98
PAN3	YKL025C	CAF20	P12962	161 aa	Known RBP	2.65	□□□□□ -1.99
PAN3	YKL025C	SPC42	P36094	363 aa		2.65	□□□□□ -1.99
PAN3	YKL025C	SUL1	P38359	859 aa		2.65	□□□□□ -1.99
PAN3	YKL025C	MIP6	P38760	659 aa	Known RBP	2.65	□□□□□ -1.99
PAN3	YKL025C	MGS1	P40151	587 aa		2.65	□□□□□ -1.99
PAN3	YKL025C	ELO3	P40319	345 aa		2.65	□□□□□ -1.99
PAN3	YKL025C	YJR142W	P47173	342 aa		2.65	□□□□□ -1.99
PAN3	YKL025C	AMA1	P50082	593 aa		2.65	□□□□□ -1.99
PAN3	YKL025C	UBC9	P50623	157 aa	Predicted RBP	2.65	□□□□□ -1.99
PAN3	YKL025C	AIM14	P53109	570 aa		2.65	□□□□□ -1.99
PAN3	YKL025C	SDA1	P53313	767 aa	Known RBP	2.65	□□□□□ -1.99
PAN3	YKL025C	ORC4	P54791	529 aa		2.65	□□□□□ -1.99
PAN3	YKL025C	NRG1	Q03125	231 aa		2.65	□□□□□ -1.99
PAN3	YKL025C	GIN4	Q12263	1142 aa		2.65	□□□□□ -1.99
PAN3	YKL025C	YGR161W-C	Q3E744	92 aa		2.65	□□□□□ -1.99
PAN3	YKL025C	HMG1	P12683	1054 aa		2.64	□□□□□ -1.99
PAN3	YKL025C	PRP31	P49704	494 aa	Predicted RBP	2.64	□□□□□ -1.99
PAN3	YKL025C	PCL10	P53124	433 aa		2.64	□□□□□ -1.99
PAN3	YKL025C	MET13	P53128	600 aa		2.64	□□□□□ -1.99
PAN3	YKL025C	YOL073C	Q08232	322 aa		2.64	□□□□□ -1.99
PAN3	YKL025C	TRM13	Q12383	476 aa		2.64	□□□□□ -1.99
PAN3	YKL025C	CCR4	P31384	837 aa	Known RBP	2.64	□□□□□ -1.99
PAN3	YKL025C	BRN1	P38170	754 aa		2.64	□□□□□ -1.99
PAN3	YKL025C	ECM1	P39715	212 aa		2.64	□□□□□ -1.99
PAN3	YKL025C	MUP1	P50276	574 aa		2.64	□□□□□ -1.99
PAN3	YKL025C	GUD1	Q07729	489 aa		2.64	□□□□□ -1.99
PAN3	YKL025C	TGL5	Q12043	749 aa		2.64	□□□□□ -1.99
PAN3	YKL025C	PNS1	Q12412	539 aa		2.64	□□□□□ -1.99
PAN3	YKL025C	PPR1	P07272	904 aa	Predicted RBP	2.63	□□□□□ -1.99
PAN3	YKL025C	ALG7	P07286	448 aa		2.63	□□□□□ -1.99
PAN3	YKL025C	LAT1	P12695	482 aa	Known RBP	2.63	□□□□□ -1.99
PAN3	YKL025C	ADE2	P21264	571 aa	Known RBP	2.63	□□□□□ -1.99
PAN3	YKL025C	MNN4	P36044	1178 aa		2.63	□□□□□ -1.99
PAN3	YKL025C	YBR053C	P38235	358 aa		2.63	□□□□□ -1.99
PAN3	YKL025C	CHS7	P38843	316 aa		2.63	□□□□□ -1.99
PAN3	YKL025C	YIR042C	P40586	236 aa		2.63	□□□□□ -1.99
PAN3	YKL025C	HLJ1	P48353	224 aa		2.63	□□□□□ -1.99
PAN3	YKL025C	ARP4	P80428	489 aa		2.63	□□□□□ -1.99
PAN3	YKL025C	ARG5,6	Q01217	863 aa		2.63	□□□□□ -1.99
PAN3	YKL025C	GAD1	Q04792	585 aa		2.63	□□□□□ -1.99
PAN3	YKL025C	FRE5	Q08908	694 aa		2.63	□□□□□ -1.99
PAN3	YKL025C	APL2	P36000	726 aa	Predicted RBP	2.63	□□□□□ -1.99
PAN3	YKL025C	YJL163C	P46996	555 aa		2.63	□□□□□ -1.99
PAN3	YKL025C	SLI1	P53304	468 aa		2.63	□□□□□ -1.99
PAN3	YKL025C	MCM21	Q06675	368 aa		2.63	□□□□□ -1.99
PAN3	YKL025C	THI73	Q07904	523 aa		2.63	□□□□□ -1.99
PAN3	YKL025C	ATG11	Q12527	1178 aa		2.63	□□□□□ -1.99
PAN3	YKL025C	APT2	P36973	181 aa		2.62	□□□□□ -1.99
PAN3	YKL025C	YHR112C	P38716	378 aa		2.62	□□□□□ -1.99
PAN3	YKL025C	YNR029C	P53729	429 aa	Known RBP	2.62	□□□□□ -1.99
PAN3	YKL025C	TEX1	P53851	422 aa	Known RBP	2.62	□□□□□ -1.99
PAN3	YKL025C	CTF4	Q01454	927 aa		2.62	□□□□□ -1.99
PAN3	YKL025C	ADY4	Q05955	493 aa		2.62	□□□□□ -1.99
PAN3	YKL025C	TRZ1	P36159	838 aa	Predicted RBP	2.61	□□□□□ -1.99
PAN3	YKL025C	SSZ1	P38788	538 aa	Known RBP	2.61	□□□□□ -1.99
PAN3	YKL025C	CRP1	P38845	465 aa	Known RBP	2.61	□□□□□ -1.99
PAN3	YKL025C	CKB2	P38930	258 aa		2.61	□□□□□ -1.99
PAN3	YKL025C	HOS4	P40480	1083 aa		2.61	□□□□□ -1.99
PAN3	YKL025C	BAP3	P41815	604 aa		2.61	□□□□□ -1.99
PAN3	YKL025C	YJR039W	P47107	1121 aa		2.61	□□□□□ -1.99
PAN3	YKL025C	PMT3	P47190	753 aa		2.61	□□□□□ -1.99
PAN3	YKL025C	REC102	Q02721	264 aa		2.61	□□□□□ -1.99
PAN3	YKL025C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	2.61	□□□□□ -1.99	not detected
PAN3	YKL025C	TYS1	P36421	394 aa	Known RBP	2.61	□□□□□ -1.99
PAN3	YKL025C	GID8	P40208	455 aa		2.61	□□□□□ -1.99
PAN3	YKL025C	BRE5	P53741	515 aa	Known RBP	2.61	□□□□□ -1.99
PAN3	YKL025C	LEE1	Q02799	301 aa	Known RBP	2.61	□□□□□ -1.99
PAN3	YKL025C	UME1	Q03010	460 aa		2.61	□□□□□ -1.99
PAN3	YKL025C	CTK1	Q03957	528 aa	Known RBP	2.61	□□□□□ -1.99
PAN3	YKL025C	HMO1	Q03973	246 aa	Known RBP	2.61	□□□□□ -1.99
PAN3	YKL025C	OMS1	Q06668	471 aa		2.61	□□□□□ -1.99
PAN3	YKL025C	DCS2	Q12123	353 aa		2.61	□□□□□ -1.99
PAN3	YKL025C	PRP19	P32523	503 aa	Known RBP	2.6	□□□□□ -1.99
PAN3	YKL025C	MOH1	P38191	138 aa		2.6	□□□□□ -1.99
PAN3	YKL025C	BCD1	P38772	366 aa		2.6	□□□□□ -1.99
PAN3	YKL025C	RET2	P43621	546 aa		2.6	□□□□□ -1.99
PAN3	YKL025C	SET2	P46995	733 aa	Known RBP	2.6	□□□□□ -1.99
PAN3	YKL025C	GPD1	Q00055	391 aa	Known RBP	2.6	□□□□□ -1.99
PAN3	YKL025C	YMR206W	Q03695	313 aa		2.6	□□□□□ -1.99
PAN3	YKL025C	IRC13	Q08630	104 aa		2.6	□□□□□ -1.99
PAN3	YKL025C	ACF2	Q12168	779 aa		2.6	□□□□□ -1.99
PAN3	YKL025C	RNR1	P21524	888 aa	Known RBP	2.59	□□□□□ -1.99
PAN3	YKL025C	AKL1	P38080	1108 aa	Known RBP	2.59	□□□□□ -1.99
PAN3	YKL025C	PPS1	P38148	807 aa		2.59	□□□□□ -1.99
PAN3	YKL025C	MAL31	P38156	614 aa		2.59	□□□□□ -1.99
PAN3	YKL025C	TDA3	P38758	523 aa		2.59	□□□□□ -1.99
PAN3	YKL025C	CCT3	P39077	534 aa	Known RBP	2.59	□□□□□ -1.99
PAN3	YKL025C	FMP52	P40008	231 aa		2.59	□□□□□ -1.99
PAN3	YKL025C	DAS1	P47005	663 aa		2.59	□□□□□ -1.99
PAN3	YKL025C	YJR096W	P47137	282 aa		2.59	□□□□□ -1.99
PAN3	YKL025C	YGR237C	P50089	785 aa		2.59	□□□□□ -1.99
PAN3	YKL025C	UBC11	P52492	156 aa		2.59	□□□□□ -1.99
PAN3	YKL025C	YGL081W	P53156	320 aa		2.59	□□□□□ -1.99
PAN3	YKL025C	MTL1	P53214	551 aa		2.59	□□□□□ -1.99
PAN3	YKL025C	TIM44	Q01852	431 aa		2.59	□□□□□ -1.99
PAN3	YKL025C	MTQ2	Q03920	221 aa	Predicted RBP	2.59	□□□□□ -1.99
PAN3	YKL025C	NUP145	P49687	1317 aa		2.59	□□□□□ -1.99
PAN3	YKL025C	HIS7	P33734	552 aa	Known RBP	2.59	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 102.8 ms