RNA–Protein interactions for RNA: YJR044C

VPS55, Transcript of Late endosomal protein involved in late endosome to vacuole transport, yeastyeast

Gene VPS55, Length 423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS55YJR044C CIR2Q08822 631 aa2.35□□□□□ -2.03
VPS55YJR044C MLH3Q12083 715 aa2.35□□□□□ -2.03
VPS55YJR044C ATG11Q12527 1178 aa2.35□□□□□ -2.03
VPS55YJR044C SPC29P33419 253 aa2.34□□□□□ -2.03
VPS55YJR044C PHO11P35842 467 aa2.34□□□□□ -2.03
VPS55YJR044C YBR259WP38338 688 aa2.34□□□□□ -2.03
VPS55YJR044C PHO12P38693 467 aa2.34□□□□□ -2.03
VPS55YJR044C LYS9P38999 446 aa2.34□□□□□ -2.03
VPS55YJR044C SPF1P39986 1215 aaKnown RBP2.34□□□□□ -2.03
VPS55YJR044C JIP5Q06214 492 aaPredicted RBP2.34□□□□□ -2.03
VPS55YJR044C THI21Q08975 551 aa2.34□□□□□ -2.03
VPS55YJR044C HBN1Q96VH4 193 aa2.34□□□□□ -2.03
VPS55YJR044C YLR149CQ99296 730 aa2.34□□□□□ -2.03
VPS55YJR044C AIM44Q99299 758 aa2.34□□□□□ -2.03
VPS55YJR044C MUP3P38734 546 aa2.33□□□□□ -2.04
VPS55YJR044C GYP8P43570 497 aa2.33□□□□□ -2.04
VPS55YJR044C NIT3P49954 291 aa2.33□□□□□ -2.04
VPS55YJR044C FHN1P53279 174 aa2.33□□□□□ -2.04
VPS55YJR044C ATG4P53867 494 aa2.33□□□□□ -2.04
VPS55YJR044C FMP30Q02883 468 aa2.33□□□□□ -2.04
VPS55YJR044C TDA5Q06417 326 aaKnown RBP2.33□□□□□ -2.04
VPS55YJR044C USV1Q12132 391 aa2.33□□□□□ -2.04
VPS55YJR044C STE12P13574 688 aa2.32□□□□□ -2.04
VPS55YJR044C CCR4P31384 837 aaKnown RBP2.32□□□□□ -2.04
VPS55YJR044C CDC11P32458 415 aa2.32□□□□□ -2.04
VPS55YJR044C RGT1P32862 1170 aa2.32□□□□□ -2.04
VPS55YJR044C SET5P38890 526 aaKnown RBP2.32□□□□□ -2.04
VPS55YJR044C VAC8P39968 578 aa2.32□□□□□ -2.04
VPS55YJR044C STB2P46679 850 aa2.32□□□□□ -2.04
VPS55YJR044C MRK1P50873 501 aa2.32□□□□□ -2.04
VPS55YJR044C FMP25Q08023 583 aa2.32□□□□□ -2.04
VPS55YJR044C PGK1P00560 416 aaKnown RBP2.31□□□□□ -2.04
VPS55YJR044C THR1P17423 357 aaKnown RBP2.31□□□□□ -2.04
VPS55YJR044C RPA135P22138 1203 aaKnown RBP2.31□□□□□ -2.04
VPS55YJR044C ERG6P25087 383 aaKnown RBP2.31□□□□□ -2.04
VPS55YJR044C EMC3P36039 253 aa2.31□□□□□ -2.04
VPS55YJR044C SET3P36124 751 aa2.31□□□□□ -2.04
VPS55YJR044C YHR112CP38716 378 aa2.31□□□□□ -2.04
VPS55YJR044C LTP1P40347 161 aa2.31□□□□□ -2.04
VPS55YJR044C PRP31P49704 494 aaPredicted RBP2.31□□□□□ -2.04
VPS55YJR044C GEP3Q08622 556 aa2.31□□□□□ -2.04
VPS55YJR044C ADE2P21264 571 aaKnown RBP2.3□□□□□ -2.04
VPS55YJR044C FUB1P25659 250 aa2.3□□□□□ -2.04
VPS55YJR044C NUP60P39705 539 aa2.3□□□□□ -2.04
VPS55YJR044C RSP5P39940 809 aaKnown RBP2.3□□□□□ -2.04
VPS55YJR044C SHR5P41912 237 aa2.3□□□□□ -2.04
VPS55YJR044C MEP2P41948 499 aa2.3□□□□□ -2.04
VPS55YJR044C ZIP2P53061 704 aa2.3□□□□□ -2.04
VPS55YJR044C ALD6P54115 500 aaKnown RBP2.3□□□□□ -2.04
VPS55YJR044C CTK1Q03957 528 aaKnown RBP2.3□□□□□ -2.04
VPS55YJR044C SLK19Q08581 821 aaKnown RBP2.3□□□□□ -2.04
VPS55YJR044C YBR182C-AQ8TGU6 64 aa2.3□□□□□ -2.04
VPS55YJR044C APN1P22936 367 aa2.29□□□□□ -2.04
VPS55YJR044C RPL8BP29453 256 aaKnown RBP2.29□□□□□ -2.04
VPS55YJR044C TAX4P47030 604 aa2.29□□□□□ -2.04
VPS55YJR044C UTP8P53276 713 aaKnown RBP2.29□□□□□ -2.04
VPS55YJR044C YGR283CP53336 341 aaPredicted RBP2.29□□□□□ -2.04
VPS55YJR044C EAF1Q06337 982 aa2.29□□□□□ -2.04
VPS55YJR044C HRP1Q99383 534 aaKnown RBP2.29□□□□□ -2.04
VPS55YJR044C YMC1P32331 307 aa2.28□□□□□ -2.04
VPS55YJR044C GMH1P36125 273 aa2.28□□□□□ -2.04
VPS55YJR044C ECM1P39715 212 aa2.28□□□□□ -2.04
VPS55YJR044C UBP6P43593 499 aaKnown RBP2.28□□□□□ -2.04
VPS55YJR044C YBP2P53169 641 aa2.28□□□□□ -2.04
VPS55YJR044C ZRT2Q12436 422 aa2.28□□□□□ -2.04
VPS55YJR044C DIF1O13577 133 aa2.27□□□□□ -2.05
VPS55YJR044C MBR1P23493 339 aa2.27□□□□□ -2.05
VPS55YJR044C PER1P25625 357 aa2.27□□□□□ -2.05
VPS55YJR044C ARE1P25628 610 aa2.27□□□□□ -2.05
VPS55YJR044C MIT1P40002 666 aa2.27□□□□□ -2.05
VPS55YJR044C GET2P40056 285 aa2.27□□□□□ -2.05
VPS55YJR044C RLP7P40693 322 aaKnown RBP2.27□□□□□ -2.05
VPS55YJR044C HXT16P47185 567 aa2.27□□□□□ -2.05
VPS55YJR044C SPC98P53540 846 aa2.27□□□□□ -2.05
VPS55YJR044C STP1Q00947 519 aa2.27□□□□□ -2.05
VPS55YJR044C PHO5P00635 467 aa2.26□□□□□ -2.05
VPS55YJR044C ADE5,7P07244 802 aaKnown RBP2.26□□□□□ -2.05
VPS55YJR044C STE4P18851 423 aa2.26□□□□□ -2.05
VPS55YJR044C SAT4P25333 603 aaKnown RBP2.26□□□□□ -2.05
VPS55YJR044C KCC4P25389 1037 aa2.26□□□□□ -2.05
VPS55YJR044C TRZ1P36159 838 aaPredicted RBP2.26□□□□□ -2.05
VPS55YJR044C YMC2P38087 329 aa2.26□□□□□ -2.05
VPS55YJR044C PMC1P38929 1173 aaPredicted RBP2.26□□□□□ -2.05
VPS55YJR044C ASN1P49089 572 aaKnown RBP2.26□□□□□ -2.05
VPS55YJR044C ERP6P53198 216 aa2.26□□□□□ -2.05
VPS55YJR044C NOP7P53261 605 aaKnown RBP2.26□□□□□ -2.05
VPS55YJR044C YDR514CQ04408 483 aa2.26□□□□□ -2.05
VPS55YJR044C HFD1Q04458 532 aa2.26□□□□□ -2.05
VPS55YJR044C YDR338CQ05497 695 aa2.26□□□□□ -2.05
VPS55YJR044C REH1Q06709 432 aa2.26□□□□□ -2.05
VPS55YJR044C MET7Q08645 548 aa2.26□□□□□ -2.05
VPS55YJR044C TOM70P07213 617 aaKnown RBP2.25□□□□□ -2.05
VPS55YJR044C APL2P36000 726 aaPredicted RBP2.25□□□□□ -2.05
VPS55YJR044C KSP1P38691 1029 aaKnown RBP2.25□□□□□ -2.05
VPS55YJR044C YGR151CP53287 111 aa2.25□□□□□ -2.05
VPS55YJR044C ARG5,6Q01217 863 aa2.25□□□□□ -2.05
VPS55YJR044C SVF1Q05515 481 aa2.25□□□□□ -2.05
VPS55YJR044C NAP1P25293 417 aaKnown RBP2.24□□□□□ -2.05
VPS55YJR044C GRX1P25373 110 aaKnown RBP2.24□□□□□ -2.05
VPS55YJR044C UGP1P32861 499 aaKnown RBP2.24□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms