RNA–Protein interactions for RNA: YGR081C

SLX9, Transcript of Protein required for pre-rRNA processing, yeast

Gene SLX9, Length 633 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SLX9	YGR081C	YFL052W	P43551	465 aa		4.16	□□□□□ -1.74
SLX9	YGR081C	TEX1	P53851	422 aa	Known RBP	4.16	□□□□□ -1.74
SLX9	YGR081C	TMN2	Q04562	672 aa		4.16	□□□□□ -1.74
SLX9	YGR081C	ATG11	Q12527	1178 aa		4.16	□□□□□ -1.74
SLX9	YGR081C	RAD18	P10862	487 aa		4.15	□□□□□ -1.75
SLX9	YGR081C	ADE2	P21264	571 aa	Known RBP	4.15	□□□□□ -1.75
SLX9	YGR081C	RRP14	P36080	434 aa	Known RBP	4.15	□□□□□ -1.75
SLX9	YGR081C	MIP6	P38760	659 aa	Known RBP	4.15	□□□□□ -1.75
SLX9	YGR081C	BCD1	P38772	366 aa		4.15	□□□□□ -1.75
SLX9	YGR081C	BAP3	P41815	604 aa		4.15	□□□□□ -1.75
SLX9	YGR081C	DAS1	P47005	663 aa		4.15	□□□□□ -1.75
SLX9	YGR081C	PRP31	P49704	494 aa	Predicted RBP	4.15	□□□□□ -1.75
SLX9	YGR081C	UBA2	P52488	636 aa		4.15	□□□□□ -1.75
SLX9	YGR081C	NPY1	P53164	384 aa		4.15	□□□□□ -1.75
SLX9	YGR081C	ALG12	P53730	551 aa		4.15	□□□□□ -1.75
SLX9	YGR081C	NHX1	Q04121	633 aa		4.15	□□□□□ -1.75
SLX9	YGR081C	GAD1	Q04792	585 aa		4.15	□□□□□ -1.75
SLX9	YGR081C	TAD3	Q9URQ3	322 aa		4.15	□□□□□ -1.75
SLX9	YGR081C	MET6	P05694	767 aa	Known RBP	4.14	□□□□□ -1.75
SLX9	YGR081C	PCL2	P25693	308 aa		4.14	□□□□□ -1.75
SLX9	YGR081C	APL2	P36000	726 aa	Predicted RBP	4.14	□□□□□ -1.75
SLX9	YGR081C	YHL017W	P38745	532 aa		4.14	□□□□□ -1.75
SLX9	YGR081C	TIM44	Q01852	431 aa		4.14	□□□□□ -1.75
SLX9	YGR081C	YLR001C	Q07895	862 aa		4.14	□□□□□ -1.75
SLX9	YGR081C	HMG1	P12683	1054 aa		4.13	□□□□□ -1.75
SLX9	YGR081C	YKR018C	P36114	725 aa		4.13	□□□□□ -1.75
SLX9	YGR081C	HSL7	P38274	827 aa		4.13	□□□□□ -1.75
SLX9	YGR081C	YHR112C	P38716	378 aa		4.13	□□□□□ -1.75
SLX9	YGR081C	LYS9	P38999	446 aa		4.13	□□□□□ -1.75
SLX9	YGR081C	FMP52	P40008	231 aa		4.13	□□□□□ -1.75
SLX9	YGR081C	SDS3	P40505	327 aa		4.13	□□□□□ -1.75
SLX9	YGR081C	UBC9	P50623	157 aa	Predicted RBP	4.13	□□□□□ -1.75
SLX9	YGR081C	PCL10	P53124	433 aa		4.13	□□□□□ -1.75
SLX9	YGR081C	YBP2	P53169	641 aa		4.13	□□□□□ -1.75
SLX9	YGR081C	ARP4	P80428	489 aa		4.13	□□□□□ -1.75
SLX9	YGR081C	ARG5,6	Q01217	863 aa		4.13	□□□□□ -1.75
SLX9	YGR081C	RPN7	Q06103	429 aa	Known RBP	4.13	□□□□□ -1.75
SLX9	YGR081C	MCM21	Q06675	368 aa		4.13	□□□□□ -1.75
SLX9	YGR081C	YEL1	P34225	687 aa		4.12	□□□□□ -1.75
SLX9	YGR081C	PCM1	P38628	557 aa	Known RBP	4.12	□□□□□ -1.75
SLX9	YGR081C	UBC11	P52492	156 aa		4.12	□□□□□ -1.75
SLX9	YGR081C	TEL2	P53038	688 aa		4.12	□□□□□ -1.75
SLX9	YGR081C	RNH70	P53331	553 aa		4.12	□□□□□ -1.75
SLX9	YGR081C	RIA1	P53893	1110 aa		4.12	□□□□□ -1.75
SLX9	YGR081C	ORC4	P54791	529 aa		4.12	□□□□□ -1.75
SLX9	YGR081C	HMO1	Q03973	246 aa	Known RBP	4.12	□□□□□ -1.75
SLX9	YGR081C	COG8	Q04632	607 aa		4.12	□□□□□ -1.75
SLX9	YGR081C	ATG33	Q06485	197 aa		4.12	□□□□□ -1.75
SLX9	YGR081C	HBT1	Q07653	1046 aa	Known RBP	4.12	□□□□□ -1.75
SLX9	YGR081C	HIR1	P32479	840 aa		4.11	□□□□□ -1.75
SLX9	YGR081C	MTH1	P35198	433 aa		4.11	□□□□□ -1.75
SLX9	YGR081C	FMO1	P38866	432 aa		4.11	□□□□□ -1.75
SLX9	YGR081C	CCT3	P39077	534 aa	Known RBP	4.11	□□□□□ -1.75
SLX9	YGR081C	GID8	P40208	455 aa		4.11	□□□□□ -1.75
SLX9	YGR081C	QRI1	P43123	477 aa	Known RBP	4.11	□□□□□ -1.75
SLX9	YGR081C	AIM14	P53109	570 aa		4.11	□□□□□ -1.75
SLX9	YGR081C	MTL1	P53214	551 aa		4.11	□□□□□ -1.75
SLX9	YGR081C	GND2	P53319	492 aa		4.11	□□□□□ -1.75
SLX9	YGR081C	TFB2	Q02939	513 aa		4.11	□□□□□ -1.75
SLX9	YGR081C	IRC10	Q08118	586 aa		4.11	□□□□□ -1.75
SLX9	YGR081C	SGO1	Q08490	590 aa		4.11	□□□□□ -1.75
SLX9	YGR081C	HRP1	Q99383	534 aa	Known RBP	4.11	□□□□□ -1.75
SLX9	YGR081C	INO80	P53115	1489 aa		4.11	□□□□□ -1.75
SLX9	YGR081C	SIR3	P06701	978 aa		4.1	□□□□□ -1.75
SLX9	YGR081C	SFL1	P20134	766 aa		4.1	□□□□□ -1.75
SLX9	YGR081C	ERG6	P25087	383 aa	Known RBP	4.1	□□□□□ -1.75
SLX9	YGR081C	PPG1	P32838	368 aa		4.1	□□□□□ -1.75
SLX9	YGR081C	HIS7	P33734	552 aa	Known RBP	4.1	□□□□□ -1.75
SLX9	YGR081C	PCL5	P38794	229 aa		4.1	□□□□□ -1.75
SLX9	YGR081C	LEE1	Q02799	301 aa	Known RBP	4.1	□□□□□ -1.75
SLX9	YGR081C	RGC1	Q06108	1083 aa	Known RBP	4.1	□□□□□ -1.75
SLX9	YGR081C	CCR4	P31384	837 aa	Known RBP	4.09	□□□□□ -1.75
SLX9	YGR081C	SPC42	P36094	363 aa		4.09	□□□□□ -1.75
SLX9	YGR081C	TRZ1	P36159	838 aa	Predicted RBP	4.09	□□□□□ -1.75
SLX9	YGR081C	APT2	P36973	181 aa		4.09	□□□□□ -1.75
SLX9	YGR081C	GET2	P40056	285 aa		4.09	□□□□□ -1.75
SLX9	YGR081C	DOT6	P40059	670 aa	Known RBP	4.09	□□□□□ -1.75
SLX9	YGR081C	BRE5	P53741	515 aa	Known RBP	4.09	□□□□□ -1.75
SLX9	YGR081C	RNR1	P21524	888 aa	Known RBP	4.08	□□□□□ -1.76
SLX9	YGR081C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected
SLX9	YGR081C	NUP60	P39705	539 aa		4.08	□□□□□ -1.76
SLX9	YGR081C	STU2	P46675	888 aa		4.08	□□□□□ -1.76
SLX9	YGR081C	PAN2	P53010	1115 aa	Predicted RBP	4.08	□□□□□ -1.76
SLX9	YGR081C	YNL193W	P53870	558 aa		4.08	□□□□□ -1.76
SLX9	YGR081C	GIS1	Q03833	894 aa		4.08	□□□□□ -1.76
SLX9	YGR081C	CTK1	Q03957	528 aa	Known RBP	4.08	□□□□□ -1.76
SLX9	YGR081C	MRH1	Q12117	320 aa	Predicted RBP	4.08	□□□□□ -1.76
SLX9	YGR081C	DCS2	Q12123	353 aa		4.08	□□□□□ -1.76
SLX9	YGR081C	RPL8A	P17076	256 aa	Known RBP	4.07	□□□□□ -1.76
SLX9	YGR081C	MVD1	P32377	396 aa	Known RBP	4.07	□□□□□ -1.76
SLX9	YGR081C	MNN4	P36044	1178 aa		4.07	□□□□□ -1.76
SLX9	YGR081C	SSZ1	P38788	538 aa	Known RBP	4.07	□□□□□ -1.76
SLX9	YGR081C	MNN1	P39106	762 aa		4.07	□□□□□ -1.76
SLX9	YGR081C	YJR039W	P47107	1121 aa		4.07	□□□□□ -1.76
SLX9	YGR081C	MET13	P53128	600 aa		4.07	□□□□□ -1.76
SLX9	YGR081C	YAP1802	P53309	568 aa		4.07	□□□□□ -1.76
SLX9	YGR081C	SMX3	P54999	86 aa	Predicted RBP	4.07	□□□□□ -1.76
SLX9	YGR081C	REC102	Q02721	264 aa		4.07	□□□□□ -1.76
SLX9	YGR081C	GIN4	Q12263	1142 aa		4.07	□□□□□ -1.76
SLX9	YGR081C	YKL033W-A	Q86ZR7	236 aa		4.07	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 1140.7 ms