RNA–Protein interactions for RNA: YGR028W

MSP1, Transcript of Highly-conserved N-terminally anchored AAA-ATPase, yeastyeast

Gene MSP1, Length 1,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSP1YGR028W COQ2P32378 372 aa7.19□□□□□ -1.26
MSP1YGR028W PGM1P33401 570 aaKnown RBP7.19□□□□□ -1.26
MSP1YGR028W RPN10P38886 268 aaKnown RBP7.19□□□□□ -1.26
MSP1YGR028W ALD5P40047 520 aaKnown RBP7.19□□□□□ -1.26
MSP1YGR028W RSC8P43609 557 aaKnown RBP7.19□□□□□ -1.26
MSP1YGR028W CIT3P43635 486 aa7.19□□□□□ -1.26
MSP1YGR028W YKE2P52553 114 aa7.19□□□□□ -1.26
MSP1YGR028W MCA1Q08601 432 aa7.19□□□□□ -1.26
MSP1YGR028W MATALPHA2P0CY08 210 aa7.18□□□□□ -1.26
MSP1YGR028W HMLALPHA2P0CY09 210 aa7.18□□□□□ -1.26
MSP1YGR028W VMA4P22203 233 aaKnown RBP7.18□□□□□ -1.26
MSP1YGR028W SAS3P34218 831 aa7.18□□□□□ -1.26
MSP1YGR028W BMH2P34730 273 aaKnown RBP7.18□□□□□ -1.26
MSP1YGR028W FAA3P39002 694 aa7.18□□□□□ -1.26
MSP1YGR028W GAA1P39012 614 aa7.18□□□□□ -1.26
MSP1YGR028W YEL025CP39991 1188 aa7.18□□□□□ -1.26
MSP1YGR028W HMF1P40037 129 aaKnown RBP7.18□□□□□ -1.26
MSP1YGR028W YGL138CP53122 345 aa7.18□□□□□ -1.26
MSP1YGR028W DIP5P53388 608 aa7.18□□□□□ -1.26
MSP1YGR028W GDE1Q02979 1223 aa7.18□□□□□ -1.26
MSP1YGR028W MSH3P25336 1018 aa7.17□□□□□ -1.26
MSP1YGR028W SMY2P32909 740 aaKnown RBP7.17□□□□□ -1.26
MSP1YGR028W DID4P36108 232 aa7.17□□□□□ -1.26
MSP1YGR028W SAF1P38352 637 aa7.17□□□□□ -1.26
MSP1YGR028W PEX28P38848 579 aa7.17□□□□□ -1.26
MSP1YGR028W MCM6P53091 1017 aaKnown RBP7.17□□□□□ -1.26
MSP1YGR028W PEX13P80667 386 aa7.17□□□□□ -1.26
MSP1YGR028W PGK1P00560 416 aaKnown RBP7.16□□□□□ -1.26
MSP1YGR028W CDC6P09119 513 aa7.16□□□□□ -1.26
MSP1YGR028W SWI6P09959 803 aa7.16□□□□□ -1.26
MSP1YGR028W TY1A-LR4P0C2I8 440 aaKnown RBP7.16□□□□□ -1.26
MSP1YGR028W TY1A-DR6P0CX70 440 aa7.16□□□□□ -1.26
MSP1YGR028W TY1A-ER1P0CX71 440 aa7.16□□□□□ -1.26
MSP1YGR028W TY1A-LR2P0CX72 440 aa7.16□□□□□ -1.26
MSP1YGR028W TY1A-PLP0CX73 440 aa7.16□□□□□ -1.26
MSP1YGR028W TY1A-JR1P0CX74 440 aa7.16□□□□□ -1.26
MSP1YGR028W TY1A-LR3P0CX75 440 aa7.16□□□□□ -1.26
MSP1YGR028W TY1A-ML2P0CX76 440 aa7.16□□□□□ -1.26
MSP1YGR028W CYC8P14922 966 aa7.16□□□□□ -1.26
MSP1YGR028W PRE9P23638 258 aaKnown RBP7.16□□□□□ -1.26
MSP1YGR028W GPD2P41911 440 aaKnown RBP7.16□□□□□ -1.26
MSP1YGR028W ZPR1P53303 486 aaKnown RBP7.16□□□□□ -1.26
MSP1YGR028W DOT1Q04089 582 aaKnown RBP7.16□□□□□ -1.26
MSP1YGR028W EMI2Q04409 500 aaKnown RBP7.16□□□□□ -1.26
MSP1YGR028W CSM3Q04659 317 aa7.16□□□□□ -1.26
MSP1YGR028W PHM6Q05637 104 aa7.16□□□□□ -1.26
MSP1YGR028W GIC2Q06648 383 aa7.16□□□□□ -1.26
MSP1YGR028W TY1A-GR1Q12085 440 aa7.16□□□□□ -1.26
MSP1YGR028W TY1A-PR3Q6Q5H1 440 aaKnown RBP7.16□□□□□ -1.26
MSP1YGR028W TY1A-OLQ92392 440 aaKnown RBP7.16□□□□□ -1.26
MSP1YGR028W GSY1P23337 708 aa7.15□□□□□ -1.26
MSP1YGR028W SRO9P25567 434 aaKnown RBP7.15□□□□□ -1.26
MSP1YGR028W DRE2P36152 348 aa7.15□□□□□ -1.26
MSP1YGR028W ATG14P38270 344 aa7.15□□□□□ -1.26
MSP1YGR028W YHR131CP38835 850 aa7.15□□□□□ -1.26
MSP1YGR028W RPS26AP39938 119 aaKnown RBP7.15□□□□□ -1.26
MSP1YGR028W RPS26BP39939 119 aaKnown RBP7.15□□□□□ -1.26
MSP1YGR028W TPO2P53283 614 aa7.15□□□□□ -1.26
MSP1YGR028W AVO1Q08236 1176 aa7.15□□□□□ -1.26
MSP1YGR028W DED1P06634 604 aaKnown RBP7.14□□□□□ -1.27
MSP1YGR028W UBC1P21734 215 aaKnown RBP7.14□□□□□ -1.27
MSP1YGR028W MSS51P32335 436 aa7.14□□□□□ -1.27
MSP1YGR028W KAE1P36132 386 aa7.14□□□□□ -1.27
MSP1YGR028W POA1P38218 177 aa7.14□□□□□ -1.27
MSP1YGR028W OPY1P38271 328 aa7.14□□□□□ -1.27
MSP1YGR028W SPO74P45819 413 aa7.14□□□□□ -1.27
MSP1YGR028W CTF18P49956 741 aa7.14□□□□□ -1.27
MSP1YGR028W YGL140CP53120 1219 aa7.14□□□□□ -1.27
MSP1YGR028W MDR1P53258 950 aa7.14□□□□□ -1.27
MSP1YGR028W CNM67P53865 581 aaKnown RBP7.14□□□□□ -1.27
MSP1YGR028W YLR407WQ06070 228 aa7.14□□□□□ -1.27
MSP1YGR028W HSP82P02829 709 aaKnown RBP7.13□□□□□ -1.27
MSP1YGR028W CLN3P13365 580 aa7.13□□□□□ -1.27
MSP1YGR028W CHS2P14180 963 aa7.13□□□□□ -1.27
MSP1YGR028W SEC23P15303 768 aaKnown RBP7.13□□□□□ -1.27
MSP1YGR028W FUB1P25659 250 aa7.13□□□□□ -1.27
MSP1YGR028W NEM1P38757 446 aa7.13□□□□□ -1.27
MSP1YGR028W FMP10P40098 244 aa7.13□□□□□ -1.27
MSP1YGR028W ULP2P40537 1034 aaPredicted RBP7.13□□□□□ -1.27
MSP1YGR028W BUD6P41697 788 aa7.13□□□□□ -1.27
MSP1YGR028W SLS1P42900 643 aa7.13□□□□□ -1.27
MSP1YGR028W RET3P53600 189 aa7.13□□□□□ -1.27
MSP1YGR028W MFM1Q02783 413 aa7.13□□□□□ -1.27
MSP1YGR028W YLH47Q06493 454 aa7.13□□□□□ -1.27
MSP1YGR028W PUF3Q07807 879 aaKnown RBP RIP-Chip data7.13□□□□□ -1.27 RIP-Chip
MSP1YGR028W MYO1P08964 1928 aa7.12□□□□□ -1.27
MSP1YGR028W SCP160P06105 1222 aaKnown RBP RIP-Chip data7.12□□□□□ -1.27not detected
MSP1YGR028W THR4P16120 514 aaKnown RBP7.12□□□□□ -1.27
MSP1YGR028W MCM2P29469 868 aa7.12□□□□□ -1.27
MSP1YGR028W RME1P32338 300 aaKnown RBP7.12□□□□□ -1.27
MSP1YGR028W RDH54P38086 958 aa7.12□□□□□ -1.27
MSP1YGR028W HSE1P38753 452 aa7.12□□□□□ -1.27
MSP1YGR028W STT3P39007 718 aaKnown RBP7.12□□□□□ -1.27
MSP1YGR028W EAF5P39995 279 aa7.12□□□□□ -1.27
MSP1YGR028W YGR045CP53229 120 aa7.12□□□□□ -1.27
MSP1YGR028W MUK1Q02866 612 aa7.12□□□□□ -1.27
MSP1YGR028W RKM2Q03942 479 aa7.12□□□□□ -1.27
MSP1YGR028W UTP5Q04177 643 aaKnown RBP7.12□□□□□ -1.27
MSP1YGR028W MAG2Q06436 670 aaKnown RBP7.12□□□□□ -1.27
MSP1YGR028W SLK19Q08581 821 aaKnown RBP7.12□□□□□ -1.27
Retrieved 100 of 5,963 RNA–protein pairs in 45.1 ms