RNA–Protein interactions for RNA: YFR004W

RPN11, Transcript of Metalloprotease subunit of 19S regulatory particle, yeastyeast

Gene RPN11, Length 921 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN11YFR004W DRE2P36152 348 aa6.54□□□□□ -1.36
RPN11YFR004W CIN4P39110 191 aa6.54□□□□□ -1.36
RPN11YFR004W NDC80P40460 691 aa6.54□□□□□ -1.36
RPN11YFR004W SAD1P43589 448 aa6.54□□□□□ -1.36
RPN11YFR004W CIT3P43635 486 aa6.54□□□□□ -1.36
RPN11YFR004W ASE1P50275 885 aa6.54□□□□□ -1.36
RPN11YFR004W HUL5P53119 910 aa6.54□□□□□ -1.36
RPN11YFR004W MUK1Q02866 612 aa6.54□□□□□ -1.36
RPN11YFR004W UME1Q03010 460 aa6.54□□□□□ -1.36
RPN11YFR004W YLR287CQ05881 355 aa6.54□□□□□ -1.36
RPN11YFR004W ADY4Q05955 493 aa6.54□□□□□ -1.36
RPN11YFR004W YAP7Q08182 245 aa6.54□□□□□ -1.36
RPN11YFR004W SLK19Q08581 821 aaKnown RBP6.54□□□□□ -1.36
RPN11YFR004W HMI1Q12039 706 aa6.54□□□□□ -1.36
RPN11YFR004W ARP6Q12509 438 aa6.54□□□□□ -1.36
RPN11YFR004W LSO1Q3E827 93 aa6.54□□□□□ -1.36
RPN11YFR004W SPO12P17123 173 aa6.53□□□□□ -1.36
RPN11YFR004W AMS1P22855 1083 aa6.53□□□□□ -1.36
RPN11YFR004W SPO11P23179 398 aa6.53□□□□□ -1.36
RPN11YFR004W BUD2P33314 1104 aa6.53□□□□□ -1.36
RPN11YFR004W SUL1P38359 859 aa6.53□□□□□ -1.36
RPN11YFR004W SHQ1P40486 507 aaPredicted RBP6.53□□□□□ -1.36
RPN11YFR004W HFM1P51979 1187 aa6.53□□□□□ -1.36
RPN11YFR004W BNI5P53890 448 aaKnown RBP6.53□□□□□ -1.36
RPN11YFR004W ALF1P53904 254 aa6.53□□□□□ -1.36
RPN11YFR004W ERG5P54781 538 aa6.53□□□□□ -1.36
RPN11YFR004W SML1Q04964 104 aa6.53□□□□□ -1.36
RPN11YFR004W PIG1Q06216 648 aa6.53□□□□□ -1.36
RPN11YFR004W IRC10Q08118 586 aa6.53□□□□□ -1.36
RPN11YFR004W CWC2Q12046 339 aaPredicted RBP6.53□□□□□ -1.36
RPN11YFR004W NOP14Q99207 810 aaKnown RBP6.53□□□□□ -1.36
RPN11YFR004W QCR6P00127 147 aa6.52□□□□□ -1.37
RPN11YFR004W RAS1P01119 309 aa6.52□□□□□ -1.37
RPN11YFR004W FUR4P05316 633 aaKnown RBP6.52□□□□□ -1.37
RPN11YFR004W SEC23P15303 768 aaKnown RBP6.52□□□□□ -1.37
RPN11YFR004W STE11P23561 717 aa6.52□□□□□ -1.37
RPN11YFR004W DPB3P27344 201 aa6.52□□□□□ -1.37
RPN11YFR004W YKL091CP33324 310 aaKnown RBP6.52□□□□□ -1.37
RPN11YFR004W EFM2P38347 419 aa6.52□□□□□ -1.37
RPN11YFR004W CCC2P38995 1004 aa6.52□□□□□ -1.37
RPN11YFR004W CCT3P39077 534 aaKnown RBP6.52□□□□□ -1.37
RPN11YFR004W YFL052WP43551 465 aa6.52□□□□□ -1.37
RPN11YFR004W GCV2P49095 1034 aa6.52□□□□□ -1.37
RPN11YFR004W SPO75Q07798 868 aa6.52□□□□□ -1.37
RPN11YFR004W YLR001CQ07895 862 aa6.52□□□□□ -1.37
RPN11YFR004W YKL068W-AQ3E826 78 aa6.52□□□□□ -1.37
RPN11YFR004W IRA2P19158 3079 aa6.51□□□□□ -1.37
RPN11YFR004W CCH1P50077 2039 aa6.51□□□□□ -1.37
RPN11YFR004W OM45P16547 393 aa6.51□□□□□ -1.37
RPN11YFR004W GSY1P23337 708 aa6.51□□□□□ -1.37
RPN11YFR004W VAN1P23642 535 aa6.51□□□□□ -1.37
RPN11YFR004W RAD57P25301 460 aa6.51□□□□□ -1.37
RPN11YFR004W IMG2P25642 146 aaPredicted RBP6.51□□□□□ -1.37
RPN11YFR004W UBP11P36026 717 aa6.51□□□□□ -1.37
RPN11YFR004W ISW1P38144 1129 aa6.51□□□□□ -1.37
RPN11YFR004W RFS1P38234 210 aaKnown RBP6.51□□□□□ -1.37
RPN11YFR004W MGE1P38523 228 aa6.51□□□□□ -1.37
RPN11YFR004W VFA1P40080 203 aa6.51□□□□□ -1.37
RPN11YFR004W RAD26P40352 1085 aa6.51□□□□□ -1.37
RPN11YFR004W IES1P43579 692 aa6.51□□□□□ -1.37
RPN11YFR004W VTC2P43585 828 aa6.51□□□□□ -1.37
RPN11YFR004W RET3P53600 189 aa6.51□□□□□ -1.37
RPN11YFR004W ORC4P54791 529 aa6.51□□□□□ -1.37
RPN11YFR004W AIM33Q04516 312 aa6.51□□□□□ -1.37
RPN11YFR004W CSM3Q04659 317 aa6.51□□□□□ -1.37
RPN11YFR004W JIP5Q06214 492 aaPredicted RBP6.51□□□□□ -1.37
RPN11YFR004W YLH47Q06493 454 aa6.51□□□□□ -1.37
RPN11YFR004W VAC14Q06708 880 aa6.51□□□□□ -1.37
RPN11YFR004W OXR1Q08952 273 aa6.51□□□□□ -1.37
RPN11YFR004W MNL2Q12205 849 aa6.51□□□□□ -1.37
RPN11YFR004W MRPL7P36519 292 aa6.5□□□□□ -1.37
RPN11YFR004W PPS1P38148 807 aa6.5□□□□□ -1.37
RPN11YFR004W MCX1P38323 520 aaPredicted RBP6.5□□□□□ -1.37
RPN11YFR004W SAF1P38352 637 aa6.5□□□□□ -1.37
RPN11YFR004W CCT4P39078 528 aaKnown RBP6.5□□□□□ -1.37
RPN11YFR004W PAC1P39946 494 aaKnown RBP6.5□□□□□ -1.37
RPN11YFR004W SAP1P39955 897 aaKnown RBP6.5□□□□□ -1.37
RPN11YFR004W MMF1P40185 145 aaKnown RBP6.5□□□□□ -1.37
RPN11YFR004W EFM4P40516 257 aa6.5□□□□□ -1.37
RPN11YFR004W THI6P41835 540 aa6.5□□□□□ -1.37
RPN11YFR004W TOS3P43637 560 aa6.5□□□□□ -1.37
RPN11YFR004W ZPR1P53303 486 aaKnown RBP6.5□□□□□ -1.37
RPN11YFR004W CBK1P53894 756 aa6.5□□□□□ -1.37
RPN11YFR004W BOP3P53958 396 aa6.5□□□□□ -1.37
RPN11YFR004W PHM6Q05637 104 aa6.5□□□□□ -1.37
RPN11YFR004W ATG23Q06671 453 aa6.5□□□□□ -1.37
RPN11YFR004W SGO1Q08490 590 aa6.5□□□□□ -1.37
RPN11YFR004W PGK1P00560 416 aaKnown RBP6.49□□□□□ -1.37
RPN11YFR004W TOM70P07213 617 aaKnown RBP6.49□□□□□ -1.37
RPN11YFR004W PPR1P07272 904 aaPredicted RBP6.49□□□□□ -1.37
RPN11YFR004W RPO26P20435 155 aa6.49□□□□□ -1.37
RPN11YFR004W PDC6P26263 563 aaKnown RBP6.49□□□□□ -1.37
RPN11YFR004W ADK2P26364 225 aa6.49□□□□□ -1.37
RPN11YFR004W EFT1P32324 842 aaKnown RBP6.49□□□□□ -1.37
RPN11YFR004W APM2P38700 605 aa6.49□□□□□ -1.37
RPN11YFR004W YHL026CP38740 315 aa6.49□□□□□ -1.37
RPN11YFR004W YAP1801P38856 637 aa6.49□□□□□ -1.37
RPN11YFR004W SMF1P38925 575 aa6.49□□□□□ -1.37
RPN11YFR004W GAA1P39012 614 aa6.49□□□□□ -1.37
RPN11YFR004W YTA12P40341 825 aa6.49□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 70.2 ms