RNA–Protein interactions for RNA: YER103W

SSA4, Transcript of Heat shock protein that is highly induced upon stress, yeast

Gene SSA4, Length 1,929 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSA4	YER103W	RGA2	Q06407	1009 aa		13.38	□□□□□ -0.27
SSA4	YER103W	GET4	Q12125	312 aa		13.38	□□□□□ -0.27
SSA4	YER103W	FLO1	P32768	1537 aa		13.37	□□□□□ -0.27
SSA4	YER103W	SPC97	P38863	823 aa		13.37	□□□□□ -0.27
SSA4	YER103W	SXM1	Q04175	944 aa	Known RBP	13.37	□□□□□ -0.27
SSA4	YER103W	OXR1	Q08952	273 aa		13.37	□□□□□ -0.27
SSA4	YER103W	VIK1	Q12045	647 aa		13.37	□□□□□ -0.27
SSA4	YER103W	MST1	P07236	462 aa		13.37	□□□□□ -0.27
SSA4	YER103W	SUI3	P09064	285 aa	Known RBP	13.37	□□□□□ -0.27
SSA4	YER103W	YML002W	P0CF17	737 aa		13.37	□□□□□ -0.27
SSA4	YER103W	ACE2	P21192	770 aa		13.37	□□□□□ -0.27
SSA4	YER103W	REB1	P21538	810 aa		13.37	□□□□□ -0.27
SSA4	YER103W	KIP1	P28742	1111 aa		13.37	□□□□□ -0.27
SSA4	YER103W	RPA14	P50106	137 aa		13.37	□□□□□ -0.27
SSA4	YER103W	YGR016W	P53209	190 aa		13.37	□□□□□ -0.27
SSA4	YER103W	IRC4	Q03036	179 aa		13.37	□□□□□ -0.27
SSA4	YER103W	AIM33	Q04516	312 aa		13.37	□□□□□ -0.27
SSA4	YER103W	DPB2	P24482	689 aa	Predicted RBP	13.36	□□□□□ -0.27
SSA4	YER103W	ADY2	P25613	283 aa		13.36	□□□□□ -0.27
SSA4	YER103W	ATO2	P32907	282 aa		13.36	□□□□□ -0.27
SSA4	YER103W	SET3	P36124	751 aa		13.36	□□□□□ -0.27
SSA4	YER103W	TRZ1	P36159	838 aa	Predicted RBP	13.36	□□□□□ -0.27
SSA4	YER103W	CCL1	P37366	393 aa		13.36	□□□□□ -0.27
SSA4	YER103W	ROG3	P43602	733 aa		13.36	□□□□□ -0.27
SSA4	YER103W	RNR4	P49723	345 aa	Known RBP	13.36	□□□□□ -0.27
SSA4	YER103W	SGT2	Q12118	346 aa	Known RBP	13.36	□□□□□ -0.27
SSA4	YER103W	PFK1	P16861	987 aa	Known RBP	13.35	□□□□□ -0.27
SSA4	YER103W	COY1	P34237	679 aa		13.35	□□□□□ -0.27
SSA4	YER103W	YKR015C	P36111	568 aa		13.35	□□□□□ -0.27
SSA4	YER103W	NUP82	P40368	713 aa		13.35	□□□□□ -0.27
SSA4	YER103W	PFK26	P40433	827 aa	Known RBP	13.35	□□□□□ -0.27
SSA4	YER103W	COS5	P47187	383 aa		13.35	□□□□□ -0.27
SSA4	YER103W	ORM1	P53224	222 aa		13.35	□□□□□ -0.27
SSA4	YER103W	YMR027W	Q04371	470 aa		13.35	□□□□□ -0.27
SSA4	YER103W	MRF1	P30775	413 aa	Predicted RBP	13.35	□□□□□ -0.27
SSA4	YER103W	UBP13	P38187	747 aa		13.35	□□□□□ -0.27
SSA4	YER103W	EXO5	P38289	585 aa		13.35	□□□□□ -0.27
SSA4	YER103W	YHL008C	P38750	627 aa		13.35	□□□□□ -0.27
SSA4	YER103W	DPH1	P40487	425 aa	Known RBP	13.35	□□□□□ -0.27
SSA4	YER103W	TFG1	P41895	735 aa	Predicted RBP	13.35	□□□□□ -0.27
SSA4	YER103W	YFR006W	P43590	535 aa		13.35	□□□□□ -0.27
SSA4	YER103W	YFH7	P43591	353 aa		13.35	□□□□□ -0.27
SSA4	YER103W	MDM20	Q12387	796 aa	Known RBP	13.35	□□□□□ -0.27
SSA4	YER103W	CMD1	P06787	147 aa	Known RBP	13.34	□□□□□ -0.27
SSA4	YER103W	SUP45	P12385	437 aa	Known RBP	13.34	□□□□□ -0.27
SSA4	YER103W	NCL1	P38205	684 aa	Known RBP	13.34	□□□□□ -0.27
SSA4	YER103W	GAA1	P39012	614 aa		13.34	□□□□□ -0.27
SSA4	YER103W	ALA1	P40825	983 aa	Known RBP	13.34	□□□□□ -0.27
SSA4	YER103W	MIG2	P53035	382 aa		13.34	□□□□□ -0.27
SSA4	YER103W	PTA1	Q01329	785 aa	Predicted RBP	13.34	□□□□□ -0.27
SSA4	YER103W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	13.34	□□□□□ -0.27	not detected
SSA4	YER103W	BUL2	Q03758	920 aa	Known RBP	13.34	□□□□□ -0.27
SSA4	YER103W	SNF1	P06782	633 aa	Known RBP	13.33	□□□□□ -0.28
SSA4	YER103W	EXO70	P19658	623 aa		13.33	□□□□□ -0.28
SSA4	YER103W	LCB1	P25045	558 aa	Known RBP	13.33	□□□□□ -0.28
SSA4	YER103W	SEC21	P32074	935 aa	Known RBP	13.33	□□□□□ -0.28
SSA4	YER103W	DBF4	P32325	704 aa		13.33	□□□□□ -0.28
SSA4	YER103W	YKR075C	P36155	307 aa		13.33	□□□□□ -0.28
SSA4	YER103W	PAM1	P37304	830 aa	Known RBP	13.33	□□□□□ -0.28
SSA4	YER103W	YGR273C	P53329	174 aa		13.33	□□□□□ -0.28
SSA4	YER103W	RPT4	P53549	437 aa	Known RBP	13.33	□□□□□ -0.28
SSA4	YER103W	YDR179W-A	Q03983	463 aa		13.33	□□□□□ -0.28
SSA4	YER103W	NOC3	Q07896	663 aa	Predicted RBP	13.33	□□□□□ -0.28
SSA4	YER103W	SEC63	P14906	663 aa		13.33	□□□□□ -0.28
SSA4	YER103W	HEM3	P28789	327 aa		13.33	□□□□□ -0.28
SSA4	YER103W	TPS2	P31688	896 aa	Known RBP	13.33	□□□□□ -0.28
SSA4	YER103W	MET4	P32389	672 aa		13.33	□□□□□ -0.28
SSA4	YER103W	FES1	P38260	290 aa		13.33	□□□□□ -0.28
SSA4	YER103W	YMR134W	P40207	237 aa		13.33	□□□□□ -0.28
SSA4	YER103W	FIG4	P42837	879 aa		13.33	□□□□□ -0.28
SSA4	YER103W	TAF1	P46677	1066 aa		13.33	□□□□□ -0.28
SSA4	YER103W	NOP9	P47077	666 aa	Known RBP	13.33	□□□□□ -0.28
SSA4	YER103W	LIA1	P47120	325 aa	Known RBP	13.33	□□□□□ -0.28
SSA4	YER103W	YNL247W	P53852	767 aa	Known RBP	13.33	□□□□□ -0.28
SSA4	YER103W	SQS1	P53866	767 aa	Known RBP	13.33	□□□□□ -0.28
SSA4	YER103W	DAK1	P54838	584 aa	Known RBP	13.33	□□□□□ -0.28
SSA4	YER103W	MUB1	Q03162	620 aa		13.33	□□□□□ -0.28
SSA4	YER103W	SNF3	P10870	884 aa		13.32	□□□□□ -0.28
SSA4	YER103W	RAD54	P32863	898 aa		13.32	□□□□□ -0.28
SSA4	YER103W	ARB1	P40024	610 aa	Known RBP	13.32	□□□□□ -0.28
SSA4	YER103W	DIM1	P41819	318 aa	Known RBP	13.32	□□□□□ -0.28
SSA4	YER103W	PGA2	P53903	129 aa		13.32	□□□□□ -0.28
SSA4	YER103W	RIX7	Q07844	837 aa	Known RBP	13.32	□□□□□ -0.28
SSA4	YER103W	YOR389W	Q08912	624 aa		13.32	□□□□□ -0.28
SSA4	YER103W	PGK1	P00560	416 aa	Known RBP	13.31	□□□□□ -0.28
SSA4	YER103W	SWI6	P09959	803 aa		13.31	□□□□□ -0.28
SSA4	YER103W	NPP1	P25353	742 aa		13.31	□□□□□ -0.28
SSA4	YER103W	PHO87	P25360	923 aa		13.31	□□□□□ -0.28
SSA4	YER103W	RPN2	P32565	945 aa	Known RBP	13.31	□□□□□ -0.28
SSA4	YER103W	SEC6	P32844	805 aa		13.31	□□□□□ -0.28
SSA4	YER103W	NUP120	P35729	1037 aa		13.31	□□□□□ -0.28
SSA4	YER103W	TRM5	P38793	499 aa		13.31	□□□□□ -0.28
SSA4	YER103W	FOL1	P53848	824 aa		13.31	□□□□□ -0.28
SSA4	YER103W	NSG2	P53898	299 aa		13.31	□□□□□ -0.28
SSA4	YER103W	SEN54	Q02825	467 aa	Predicted RBP	13.31	□□□□□ -0.28
SSA4	YER103W	ATG16	Q03818	150 aa		13.31	□□□□□ -0.28
SSA4	YER103W	YPL277C	Q08989	487 aa		13.31	□□□□□ -0.28
SSA4	YER103W	RRD2	Q12461	358 aa		13.31	□□□□□ -0.28
SSA4	YER103W	AAD3	P25612	363 aa		13.31	□□□□□ -0.28
SSA4	YER103W	POP4	P38336	279 aa		13.31	□□□□□ -0.28

Retrieved 100 of 5,963 RNA–protein pairs in 45.8 ms