RNA–Protein interactions for RNA: YEL003W

GIM4, Transcript of Subunit of the heterohexameric cochaperone prefoldin complex, yeast

Gene GIM4, Length 336 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GIM4	YEL003W	SCS3	P53012	380 aa		4.3	□□□□□ -1.72
GIM4	YEL003W	YUR1	P26725	428 aa		4.29	□□□□□ -1.72
GIM4	YEL003W	GYP8	P43570	497 aa		4.29	□□□□□ -1.72
GIM4	YEL003W	ERP6	P53198	216 aa		4.29	□□□□□ -1.72
GIM4	YEL003W	FHN1	P53279	174 aa		4.29	□□□□□ -1.72
GIM4	YEL003W	YGR283C	P53336	341 aa	Predicted RBP	4.29	□□□□□ -1.72
GIM4	YEL003W	ATG4	P53867	494 aa		4.29	□□□□□ -1.72
GIM4	YEL003W	ALD6	P54115	500 aa	Known RBP	4.29	□□□□□ -1.72
GIM4	YEL003W	RPL8B	P29453	256 aa	Known RBP	4.28	□□□□□ -1.72
GIM4	YEL003W	SFB3	P38810	929 aa		4.28	□□□□□ -1.72
GIM4	YEL003W	FMO1	P38866	432 aa		4.28	□□□□□ -1.72
GIM4	YEL003W	LTP1	P40347	161 aa		4.28	□□□□□ -1.72
GIM4	YEL003W	UBP6	P43593	499 aa	Known RBP	4.28	□□□□□ -1.72
GIM4	YEL003W	ZIP2	P53061	704 aa		4.28	□□□□□ -1.72
GIM4	YEL003W	MTL1	P53214	551 aa		4.28	□□□□□ -1.72
GIM4	YEL003W	EAF1	Q06337	982 aa		4.28	□□□□□ -1.72
GIM4	YEL003W	REH1	Q06709	432 aa		4.28	□□□□□ -1.72
GIM4	YEL003W	YBR182C-A	Q8TGU6	64 aa		4.28	□□□□□ -1.72
GIM4	YEL003W	MVD1	P32377	396 aa	Known RBP	4.27	□□□□□ -1.73
GIM4	YEL003W	MUP3	P38734	546 aa		4.27	□□□□□ -1.73
GIM4	YEL003W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.27	□□□□□ -1.73	not detected
GIM4	YEL003W	LYS9	P38999	446 aa		4.27	□□□□□ -1.73
GIM4	YEL003W	SPC29	P33419	253 aa		4.26	□□□□□ -1.73
GIM4	YEL003W	NUP60	P39705	539 aa		4.26	□□□□□ -1.73
GIM4	YEL003W	PTP1	P25044	335 aa		4.25	□□□□□ -1.73
GIM4	YEL003W	CCR4	P31384	837 aa	Known RBP	4.25	□□□□□ -1.73
GIM4	YEL003W	PHO11	P35842	467 aa		4.25	□□□□□ -1.73
GIM4	YEL003W	PHO12	P38693	467 aa		4.25	□□□□□ -1.73
GIM4	YEL003W	PRP31	P49704	494 aa	Predicted RBP	4.25	□□□□□ -1.73
GIM4	YEL003W	CTK1	Q03957	528 aa	Known RBP	4.25	□□□□□ -1.73
GIM4	YEL003W	SPO75	Q07798	868 aa		4.25	□□□□□ -1.73
GIM4	YEL003W	RGT2	Q12300	763 aa		4.25	□□□□□ -1.73
GIM4	YEL003W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.24	□□□□□ -1.73	not detected
GIM4	YEL003W	NET1	P47035	1189 aa		4.24	□□□□□ -1.73
GIM4	YEL003W	HXT16	P47185	567 aa		4.24	□□□□□ -1.73
GIM4	YEL003W	YBP2	P53169	641 aa		4.24	□□□□□ -1.73
GIM4	YEL003W	MLH3	Q12083	715 aa		4.24	□□□□□ -1.73
GIM4	YEL003W	ARE1	P25628	610 aa		4.23	□□□□□ -1.73
GIM4	YEL003W	APL2	P36000	726 aa	Predicted RBP	4.23	□□□□□ -1.73
GIM4	YEL003W	YHR112C	P38716	378 aa		4.23	□□□□□ -1.73
GIM4	YEL003W	SHR5	P41912	237 aa		4.23	□□□□□ -1.73
GIM4	YEL003W	YDR514C	Q04408	483 aa		4.23	□□□□□ -1.73
GIM4	YEL003W	SLK19	Q08581	821 aa	Known RBP	4.23	□□□□□ -1.73
GIM4	YEL003W	DIF1	O13577	133 aa		4.22	□□□□□ -1.73
GIM4	YEL003W	PGK1	P00560	416 aa	Known RBP	4.22	□□□□□ -1.73
GIM4	YEL003W	ERG11	P10614	530 aa		4.22	□□□□□ -1.73
GIM4	YEL003W	THR1	P17423	357 aa	Known RBP	4.22	□□□□□ -1.73
GIM4	YEL003W	ADE2	P21264	571 aa	Known RBP	4.22	□□□□□ -1.73
GIM4	YEL003W	GRX1	P25373	110 aa	Known RBP	4.22	□□□□□ -1.73
GIM4	YEL003W	RLP7	P40693	322 aa	Known RBP	4.22	□□□□□ -1.73
GIM4	YEL003W	ZDS1	P50111	915 aa	Known RBP	4.22	□□□□□ -1.73
GIM4	YEL003W	NAN1	Q02931	896 aa	Known RBP	4.22	□□□□□ -1.73
GIM4	YEL003W	ATP25	Q03153	612 aa		4.22	□□□□□ -1.73
GIM4	YEL003W	FUB1	P25659	250 aa		4.21	□□□□□ -1.74
GIM4	YEL003W	TRZ1	P36159	838 aa	Predicted RBP	4.21	□□□□□ -1.74
GIM4	YEL003W	ARG5,6	Q01217	863 aa		4.21	□□□□□ -1.74
GIM4	YEL003W	RGC1	Q06108	1083 aa	Known RBP	4.21	□□□□□ -1.74
GIM4	YEL003W	MET7	Q08645	548 aa		4.21	□□□□□ -1.74
GIM4	YEL003W	YLR149C	Q99296	730 aa		4.21	□□□□□ -1.74
GIM4	YEL003W	BPL1	P48445	690 aa	Predicted RBP	4.2	□□□□□ -1.74
GIM4	YEL003W	MCM21	Q06675	368 aa		4.2	□□□□□ -1.74
GIM4	YEL003W	USV1	Q12132	391 aa		4.2	□□□□□ -1.74
GIM4	YEL003W	HRP1	Q99383	534 aa	Known RBP	4.2	□□□□□ -1.74
GIM4	YEL003W	GMH1	P36125	273 aa		4.19	□□□□□ -1.74
GIM4	YEL003W	XBP1	P40489	647 aa		4.19	□□□□□ -1.74
GIM4	YEL003W	ALG2	P43636	503 aa		4.19	□□□□□ -1.74
GIM4	YEL003W	MPS1	P54199	764 aa		4.19	□□□□□ -1.74
GIM4	YEL003W	YDL124W	Q07551	312 aa	Known RBP	4.19	□□□□□ -1.74
GIM4	YEL003W	SSF2	Q12153	453 aa	Predicted RBP	4.19	□□□□□ -1.74
GIM4	YEL003W	CLF1	Q12309	687 aa	Predicted RBP	4.19	□□□□□ -1.74
GIM4	YEL003W	ZRT2	Q12436	422 aa		4.19	□□□□□ -1.74
GIM4	YEL003W	OSH2	Q12451	1283 aa		4.19	□□□□□ -1.74
GIM4	YEL003W	TOM70	P07213	617 aa	Known RBP	4.18	□□□□□ -1.74
GIM4	YEL003W	HSP60	P19882	572 aa	Known RBP	4.18	□□□□□ -1.74
GIM4	YEL003W	STB2	P46679	850 aa		4.18	□□□□□ -1.74
GIM4	YEL003W	TAF8	Q03750	510 aa		4.18	□□□□□ -1.74
GIM4	YEL003W	CIR2	Q08822	631 aa		4.18	□□□□□ -1.74
GIM4	YEL003W	CIT1	P00890	479 aa		4.17	□□□□□ -1.74
GIM4	YEL003W	ERG6	P25087	383 aa	Known RBP	4.17	□□□□□ -1.74
GIM4	YEL003W	SET3	P36124	751 aa		4.17	□□□□□ -1.74
GIM4	YEL003W	APT2	P36973	181 aa		4.17	□□□□□ -1.74
GIM4	YEL003W	YDR338C	Q05497	695 aa		4.17	□□□□□ -1.74
GIM4	YEL003W	RPA135	P22138	1203 aa	Known RBP	4.16	□□□□□ -1.74
GIM4	YEL003W	KCC4	P25389	1037 aa		4.16	□□□□□ -1.74
GIM4	YEL003W	TY4A-J	P47023	414 aa		4.16	□□□□□ -1.74
GIM4	YEL003W	HMO1	Q03973	246 aa	Known RBP	4.16	□□□□□ -1.74
GIM4	YEL003W	NUP1	P20676	1076 aa		4.15	□□□□□ -1.75
GIM4	YEL003W	CRP1	P38845	465 aa	Known RBP	4.15	□□□□□ -1.75
GIM4	YEL003W	GET2	P40056	285 aa		4.15	□□□□□ -1.75
GIM4	YEL003W	ALY2	P47029	1046 aa		4.15	□□□□□ -1.75
GIM4	YEL003W	ORC4	P54791	529 aa		4.15	□□□□□ -1.75
GIM4	YEL003W	FMP30	Q02883	468 aa		4.15	□□□□□ -1.75
GIM4	YEL003W	TDA9	Q04545	1251 aa		4.15	□□□□□ -1.75
GIM4	YEL003W	WRS1	Q12109	432 aa	Known RBP	4.15	□□□□□ -1.75
GIM4	YEL003W	RAD4	P14736	754 aa		4.14	□□□□□ -1.75
GIM4	YEL003W	SAT4	P25333	603 aa	Known RBP	4.14	□□□□□ -1.75
GIM4	YEL003W	YMC2	P38087	329 aa		4.14	□□□□□ -1.75
GIM4	YEL003W	ADE5,7	P07244	802 aa	Known RBP	4.13	□□□□□ -1.75
GIM4	YEL003W	STE12	P13574	688 aa		4.13	□□□□□ -1.75
GIM4	YEL003W	APN1	P22936	367 aa		4.13	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms