RNA–Protein interactions for RNA: YDR464W

SPP41, Transcript of Protein of unknown function, yeast

Gene SPP41, Length 4,308 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPP41	YDR464W	ARP9	Q05123	467 aa		2.21	□□□□□ -2.06
SPP41	YDR464W	BCP1	Q06338	283 aa		2.21	□□□□□ -2.06
SPP41	YDR464W	RRP9	Q06506	573 aa	Known RBP	2.21	□□□□□ -2.06
SPP41	YDR464W	NOP12	Q08208	459 aa	Known RBP	2.21	□□□□□ -2.06
SPP41	YDR464W	GPN2	Q08726	347 aa	Predicted RBP	2.21	□□□□□ -2.06
SPP41	YDR464W	CEX1	Q12453	761 aa		2.21	□□□□□ -2.06
SPP41	YDR464W	ADF1	Q2V2Q1	113 aa		2.21	□□□□□ -2.06
SPP41	YDR464W	CIT1	P00890	479 aa		2.21	□□□□□ -2.06
SPP41	YDR464W	DPB2	P24482	689 aa	Predicted RBP	2.21	□□□□□ -2.06
SPP41	YDR464W	SAS3	P34218	831 aa		2.21	□□□□□ -2.06
SPP41	YDR464W	PTC3	P34221	468 aa	Known RBP	2.21	□□□□□ -2.06
SPP41	YDR464W	BCH2	P36122	765 aa		2.21	□□□□□ -2.06
SPP41	YDR464W	UBP13	P38187	747 aa		2.21	□□□□□ -2.06
SPP41	YDR464W	ALG5	P40350	334 aa		2.21	□□□□□ -2.06
SPP41	YDR464W	MET18	P40469	1032 aa		2.21	□□□□□ -2.06
SPP41	YDR464W	YFR006W	P43590	535 aa		2.21	□□□□□ -2.06
SPP41	YDR464W	MTC3	P53077	123 aa		2.21	□□□□□ -2.06
SPP41	YDR464W	ATG1	P53104	897 aa		2.21	□□□□□ -2.06
SPP41	YDR464W	ARK1	P53974	638 aa		2.21	□□□□□ -2.06
SPP41	YDR464W	VPS9	P54787	451 aa		2.21	□□□□□ -2.06
SPP41	YDR464W	YKR005C	Q02203	525 aa		2.21	□□□□□ -2.06
SPP41	YDR464W	YML119W	Q03208	357 aa		2.21	□□□□□ -2.06
SPP41	YDR464W	MAG2	Q06436	670 aa	Known RBP	2.21	□□□□□ -2.06
SPP41	YDR464W	YPL191C	Q08930	360 aa		2.21	□□□□□ -2.06
SPP41	YDR464W	ACM1	Q08981	209 aa		2.21	□□□□□ -2.06
SPP41	YDR464W	TRP2	P00899	507 aa	Known RBP	2.2	□□□□□ -2.06
SPP41	YDR464W	SSB1	P11484	613 aa	Known RBP	2.2	□□□□□ -2.06
SPP41	YDR464W	KEX2	P13134	814 aa		2.2	□□□□□ -2.06
SPP41	YDR464W	GCN3	P14741	305 aa		2.2	□□□□□ -2.06
SPP41	YDR464W	CLN2	P20438	545 aa		2.2	□□□□□ -2.06
SPP41	YDR464W	RPL5	P26321	297 aa	Known RBP	2.2	□□□□□ -2.06
SPP41	YDR464W	CAP1	P28495	268 aa	Known RBP	2.2	□□□□□ -2.06
SPP41	YDR464W	GPI10	P30777	616 aa		2.2	□□□□□ -2.06
SPP41	YDR464W	MLS1	P30952	554 aa		2.2	□□□□□ -2.06
SPP41	YDR464W	GEF1	P37020	779 aa		2.2	□□□□□ -2.06
SPP41	YDR464W	CCL1	P37366	393 aa		2.2	□□□□□ -2.06
SPP41	YDR464W	YHL008C	P38750	627 aa		2.2	□□□□□ -2.06
SPP41	YDR464W	TDA3	P38758	523 aa		2.2	□□□□□ -2.06
SPP41	YDR464W	VHR2	P40041	505 aa		2.2	□□□□□ -2.06
SPP41	YDR464W	SSB2	P40150	613 aa	Known RBP	2.2	□□□□□ -2.06
SPP41	YDR464W	ULP2	P40537	1034 aa	Predicted RBP	2.2	□□□□□ -2.06
SPP41	YDR464W	LEM3	P42838	414 aa		2.2	□□□□□ -2.06
SPP41	YDR464W	UBP15	P50101	1230 aa		2.2	□□□□□ -2.06
SPP41	YDR464W	RMR1	P53060	241 aa		2.2	□□□□□ -2.06
SPP41	YDR464W	TMA20	P89886	181 aa	Predicted RBP	2.2	□□□□□ -2.06
SPP41	YDR464W	MUB1	Q03162	620 aa		2.2	□□□□□ -2.06
SPP41	YDR464W	YDR476C	Q03362	224 aa		2.2	□□□□□ -2.06
SPP41	YDR464W	CSM3	Q04659	317 aa		2.2	□□□□□ -2.06
SPP41	YDR464W	RPL17A	P05740	184 aa	Known RBP	2.2	□□□□□ -2.06
SPP41	YDR464W	CMD1	P06787	147 aa	Known RBP	2.2	□□□□□ -2.06
SPP41	YDR464W	HO	P09932	586 aa		2.2	□□□□□ -2.06
SPP41	YDR464W	MPH2	P0CD99	609 aa		2.2	□□□□□ -2.06
SPP41	YDR464W	HSC82	P15108	705 aa	Known RBP	2.2	□□□□□ -2.06
SPP41	YDR464W	THR4	P16120	514 aa	Known RBP	2.2	□□□□□ -2.06
SPP41	YDR464W	PRP9	P19736	530 aa	Known RBP	2.2	□□□□□ -2.06
SPP41	YDR464W	SIT4	P20604	311 aa		2.2	□□□□□ -2.06
SPP41	YDR464W	RAM2	P29703	316 aa		2.2	□□□□□ -2.06
SPP41	YDR464W	SLA2	P33338	968 aa		2.2	□□□□□ -2.06
SPP41	YDR464W	BLI1	P35727	113 aa		2.2	□□□□□ -2.06
SPP41	YDR464W	YKL050C	P35736	922 aa		2.2	□□□□□ -2.06
SPP41	YDR464W	HSM3	P38348	480 aa		2.2	□□□□□ -2.06
SPP41	YDR464W	SPC72	P39723	622 aa		2.2	□□□□□ -2.06
SPP41	YDR464W	SSP120	P39931	234 aa	Known RBP	2.2	□□□□□ -2.06
SPP41	YDR464W	JEM1	P40358	645 aa		2.2	□□□□□ -2.06
SPP41	YDR464W	CAB2	P40506	365 aa		2.2	□□□□□ -2.06
SPP41	YDR464W	AXL1	P40851	1208 aa		2.2	□□□□□ -2.06
SPP41	YDR464W	EMW1	P42842	904 aa	Known RBP	2.2	□□□□□ -2.06
SPP41	YDR464W	STB1	P42845	420 aa		2.2	□□□□□ -2.06
SPP41	YDR464W	RPL17B	P46990	184 aa	Known RBP	2.2	□□□□□ -2.06
SPP41	YDR464W	VPS70	P47161	811 aa		2.2	□□□□□ -2.06
SPP41	YDR464W	RIM8	P53179	542 aa		2.2	□□□□□ -2.06
SPP41	YDR464W	RPM2	Q02773	1202 aa		2.2	□□□□□ -2.06
SPP41	YDR464W	CEF1	Q03654	590 aa	Predicted RBP	2.2	□□□□□ -2.06
SPP41	YDR464W	MSH6	Q03834	1242 aa		2.2	□□□□□ -2.06
SPP41	YDR464W	TDA5	Q06417	326 aa	Known RBP	2.2	□□□□□ -2.06
SPP41	YDR464W	NSE1	Q07913	336 aa		2.2	□□□□□ -2.06
SPP41	YDR464W	ABP140	Q08641	628 aa	Known RBP	2.2	□□□□□ -2.06
SPP41	YDR464W	RPL6B	P05739	176 aa	Known RBP	2.2	□□□□□ -2.06
SPP41	YDR464W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	2.2	□□□□□ -2.06	not detected
SPP41	YDR464W	MST1	P07236	462 aa		2.2	□□□□□ -2.06
SPP41	YDR464W	PDC5	P16467	563 aa	Known RBP	2.2	□□□□□ -2.06
SPP41	YDR464W	SPS22	P25380	463 aa		2.2	□□□□□ -2.06
SPP41	YDR464W	RRN6	P32786	894 aa		2.2	□□□□□ -2.06
SPP41	YDR464W	TFC4	P33339	1025 aa		2.2	□□□□□ -2.06
SPP41	YDR464W	UBP11	P36026	717 aa		2.2	□□□□□ -2.06
SPP41	YDR464W	YKL023W	P36103	277 aa	Known RBP	2.2	□□□□□ -2.06
SPP41	YDR464W	PPS1	P38148	807 aa		2.2	□□□□□ -2.06
SPP41	YDR464W	SHC1	P39000	512 aa		2.2	□□□□□ -2.06
SPP41	YDR464W	PSY2	P40164	858 aa		2.2	□□□□□ -2.06
SPP41	YDR464W	GPD2	P41911	440 aa	Known RBP	2.2	□□□□□ -2.06
SPP41	YDR464W	FMP33	P46998	180 aa		2.2	□□□□□ -2.06
SPP41	YDR464W	ZAP1	P47043	880 aa		2.2	□□□□□ -2.06
SPP41	YDR464W	NBP1	P52919	319 aa	Predicted RBP	2.2	□□□□□ -2.06
SPP41	YDR464W	HPC2	Q01448	625 aa		2.2	□□□□□ -2.06
SPP41	YDR464W	RCF1	Q03713	159 aa		2.2	□□□□□ -2.06
SPP41	YDR464W	APM4	Q99186	491 aa		2.2	□□□□□ -2.06
SPP41	YDR464W	YLR462W	O13556	202 aa		2.19	□□□□□ -2.06
SPP41	YDR464W	POL30	P15873	258 aa	Known RBP	2.19	□□□□□ -2.06
SPP41	YDR464W	GSY1	P23337	708 aa		2.19	□□□□□ -2.06
SPP41	YDR464W	NPP1	P25353	742 aa		2.19	□□□□□ -2.06

Retrieved 100 of 5,963 RNA–protein pairs in 73.6 ms