RNA–Protein interactions for RNA: YDL164C

CDC9, Transcript of DNA ligase found in the nucleus and mitochondria, yeastyeast

Gene CDC9, Length 2,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC9YDL164C NUR1Q12066 484 aa4.8□□□□□ -1.64
CDC9YDL164C QCR6P00127 147 aa4.79□□□□□ -1.64
CDC9YDL164C YRO2P38079 344 aa4.79□□□□□ -1.64
CDC9YDL164C YBR138CP38277 524 aa4.79□□□□□ -1.64
CDC9YDL164C EMP65P40085 556 aa4.79□□□□□ -1.64
CDC9YDL164C YER156CP40093 338 aaKnown RBP4.79□□□□□ -1.64
CDC9YDL164C IRC5P43610 853 aa4.79□□□□□ -1.64
CDC9YDL164C YLR257WQ06146 321 aaKnown RBP4.79□□□□□ -1.64
CDC9YDL164C CIR2Q08822 631 aa4.79□□□□□ -1.64
CDC9YDL164C RTK1Q12100 620 aaPredicted RBP4.79□□□□□ -1.64
CDC9YDL164C TAH18Q12181 623 aa4.79□□□□□ -1.64
CDC9YDL164C Q0142Q9ZZW4 58 aa4.79□□□□□ -1.64
CDC9YDL164C SEM1O94742 89 aa4.79□□□□□ -1.64
CDC9YDL164C MET17P06106 444 aa4.79□□□□□ -1.64
CDC9YDL164C ENA1P13587 1091 aa4.79□□□□□ -1.64
CDC9YDL164C REC104P33323 182 aa4.79□□□□□ -1.64
CDC9YDL164C YKR051WP36142 418 aa4.79□□□□□ -1.64
CDC9YDL164C TDA3P38758 523 aa4.79□□□□□ -1.64
CDC9YDL164C FMP10P40098 244 aa4.79□□□□□ -1.64
CDC9YDL164C YIL092WP40497 633 aa4.79□□□□□ -1.64
CDC9YDL164C LSB6P42951 607 aa4.79□□□□□ -1.64
CDC9YDL164C RNR4P49723 345 aaKnown RBP4.79□□□□□ -1.64
CDC9YDL164C YKE2P52553 114 aa4.79□□□□□ -1.64
CDC9YDL164C ENA2Q01896 1091 aa4.79□□□□□ -1.64
CDC9YDL164C YMR155WQ03795 547 aa4.79□□□□□ -1.64
CDC9YDL164C YMR018WQ04364 514 aa4.79□□□□□ -1.64
CDC9YDL164C LAP2Q10740 671 aa4.79□□□□□ -1.64
CDC9YDL164C PUS1Q12211 544 aaKnown RBP4.79□□□□□ -1.64
CDC9YDL164C ENA5Q12691 1091 aa4.79□□□□□ -1.64
CDC9YDL164C YBR182C-AQ8TGU6 64 aa4.79□□□□□ -1.64
CDC9YDL164C GLN4P13188 809 aaKnown RBP4.78□□□□□ -1.64
CDC9YDL164C AMS1P22855 1083 aa4.78□□□□□ -1.64
CDC9YDL164C MSH1P25846 959 aa4.78□□□□□ -1.64
CDC9YDL164C BYE1P36106 594 aa4.78□□□□□ -1.64
CDC9YDL164C KAP123P40069 1113 aaKnown RBP4.78□□□□□ -1.64
CDC9YDL164C NAS2P40555 220 aa4.78□□□□□ -1.64
CDC9YDL164C VPS53P47061 822 aa4.78□□□□□ -1.64
CDC9YDL164C TAN1P53072 289 aaPredicted RBP4.78□□□□□ -1.64
CDC9YDL164C MTC3P53077 123 aa4.78□□□□□ -1.64
CDC9YDL164C LRS4Q04087 347 aaKnown RBP4.78□□□□□ -1.64
CDC9YDL164C SMC6Q12749 1114 aa4.78□□□□□ -1.64
CDC9YDL164C GLK1P17709 500 aaKnown RBP4.77□□□□□ -1.65
CDC9YDL164C FUR1P18562 216 aaKnown RBP4.77□□□□□ -1.65
CDC9YDL164C CYS3P31373 394 aaKnown RBP4.77□□□□□ -1.65
CDC9YDL164C PGM2P37012 569 aaKnown RBP4.77□□□□□ -1.65
CDC9YDL164C SMK1P41808 388 aa4.77□□□□□ -1.65
CDC9YDL164C SPO74P45819 413 aa4.77□□□□□ -1.65
CDC9YDL164C ZDS2P54786 942 aa4.77□□□□□ -1.65
CDC9YDL164C PRP42Q03776 544 aaKnown RBP4.77□□□□□ -1.65
CDC9YDL164C MFB1Q04922 465 aa4.77□□□□□ -1.65
CDC9YDL164C HEL2Q05580 639 aaKnown RBP4.77□□□□□ -1.65
CDC9YDL164C CWC2Q12046 339 aaPredicted RBP4.77□□□□□ -1.65
CDC9YDL164C UBC1P21734 215 aaKnown RBP4.77□□□□□ -1.65
CDC9YDL164C APM3P38153 483 aa4.77□□□□□ -1.65
CDC9YDL164C RGD1P38339 666 aa4.77□□□□□ -1.65
CDC9YDL164C VPS41P38959 992 aa4.77□□□□□ -1.65
CDC9YDL164C SWD1P39706 426 aa4.77□□□□□ -1.65
CDC9YDL164C MAD2P40958 196 aa4.77□□□□□ -1.65
CDC9YDL164C HNT2P49775 206 aa4.77□□□□□ -1.65
CDC9YDL164C LEE1Q02799 301 aaKnown RBP4.77□□□□□ -1.65
CDC9YDL164C YHM2Q04013 314 aa4.77□□□□□ -1.65
CDC9YDL164C ISA1Q07821 250 aaPredicted RBP4.77□□□□□ -1.65
CDC9YDL164C ESC8Q08119 714 aa4.77□□□□□ -1.65
CDC9YDL164C KEL3Q08979 651 aaPredicted RBP4.77□□□□□ -1.65
CDC9YDL164C ISN1Q99312 450 aa4.77□□□□□ -1.65
CDC9YDL164C PDX1P16451 410 aa4.76□□□□□ -1.65
CDC9YDL164C ROX1P25042 368 aa4.76□□□□□ -1.65
CDC9YDL164C SLA2P33338 968 aa4.76□□□□□ -1.65
CDC9YDL164C POP2P39008 433 aa4.76□□□□□ -1.65
CDC9YDL164C LYS14P40971 790 aa4.76□□□□□ -1.65
CDC9YDL164C SIP4P46954 829 aa4.76□□□□□ -1.65
CDC9YDL164C DIN7Q12086 430 aa4.76□□□□□ -1.65
CDC9YDL164C PCD1Q12524 340 aa4.76□□□□□ -1.65
CDC9YDL164C APE1P14904 514 aa4.76□□□□□ -1.65
CDC9YDL164C RRP7P25368 297 aaPredicted RBP4.76□□□□□ -1.65
CDC9YDL164C PGS1P25578 521 aa4.76□□□□□ -1.65
CDC9YDL164C POT1P27796 417 aaKnown RBP RIP-Chip data4.76□□□□□ -1.65not detected
CDC9YDL164C DAL1P32375 460 aa4.76□□□□□ -1.65
CDC9YDL164C STT3P39007 718 aaKnown RBP4.76□□□□□ -1.65
CDC9YDL164C DLD3P39976 496 aaKnown RBP4.76□□□□□ -1.65
CDC9YDL164C YIL166CP40445 542 aa4.76□□□□□ -1.65
CDC9YDL164C YIG1Q08956 461 aa4.76□□□□□ -1.65
CDC9YDL164C REX3Q12090 404 aa4.76□□□□□ -1.65
CDC9YDL164C YOL159C-AQ3E769 90 aa4.76□□□□□ -1.65
CDC9YDL164C ACE2P21192 770 aa4.75□□□□□ -1.65
CDC9YDL164C PHO3P24031 467 aa4.75□□□□□ -1.65
CDC9YDL164C SEC65P29478 273 aa4.75□□□□□ -1.65
CDC9YDL164C HXT4P32467 576 aa4.75□□□□□ -1.65
CDC9YDL164C TFB1P32776 642 aa4.75□□□□□ -1.65
CDC9YDL164C XRS2P33301 854 aa4.75□□□□□ -1.65
CDC9YDL164C PXA2P34230 853 aa4.75□□□□□ -1.65
CDC9YDL164C SEG2P34250 1132 aa4.75□□□□□ -1.65
CDC9YDL164C HSL7P38274 827 aa4.75□□□□□ -1.65
CDC9YDL164C SCS2P40075 244 aaKnown RBP4.75□□□□□ -1.65
CDC9YDL164C RAD26P40352 1085 aa4.75□□□□□ -1.65
CDC9YDL164C JEM1P40358 645 aa4.75□□□□□ -1.65
CDC9YDL164C CTF18P49956 741 aa4.75□□□□□ -1.65
CDC9YDL164C PIL1P53252 339 aaKnown RBP4.75□□□□□ -1.65
CDC9YDL164C CBK1P53894 756 aa4.75□□□□□ -1.65
CDC9YDL164C HED1Q03937 162 aa4.75□□□□□ -1.65
Retrieved 100 of 5,963 RNA–protein pairs in 25.9 ms