RNA–Protein interactions for RNA: YDL147W

RPN5, Transcript of Subunit of the CSN and 26S proteasome lid complexes, yeast

Gene RPN5, Length 1,338 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN5	YDL147W	RPS21A	P0C0V8	87 aa	Known RBP	6.59	□□□□□ -1.35
RPN5	YDL147W	PFK1	P16861	987 aa	Known RBP	6.59	□□□□□ -1.35
RPN5	YDL147W	SED4	P25365	1065 aa		6.59	□□□□□ -1.35
RPN5	YDL147W	OAF3	P36023	863 aa		6.59	□□□□□ -1.35
RPN5	YDL147W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	6.59	□□□□□ -1.35	not detected
RPN5	YDL147W	MLC2	Q06580	163 aa		6.59	□□□□□ -1.35
RPN5	YDL147W	DCS2	Q12123	353 aa		6.59	□□□□□ -1.35
RPN5	YDL147W	APM4	Q99186	491 aa		6.59	□□□□□ -1.35
RPN5	YDL147W	KCC4	P25389	1037 aa		6.58	□□□□□ -1.36
RPN5	YDL147W	SWE1	P32944	819 aa		6.58	□□□□□ -1.36
RPN5	YDL147W	PTH2	P34222	208 aa		6.58	□□□□□ -1.36
RPN5	YDL147W	MIP6	P38760	659 aa	Known RBP	6.58	□□□□□ -1.36
RPN5	YDL147W	CTF8	P38877	133 aa		6.58	□□□□□ -1.36
RPN5	YDL147W	SAK1	P38990	1142 aa		6.58	□□□□□ -1.36
RPN5	YDL147W	YJR039W	P47107	1121 aa		6.58	□□□□□ -1.36
RPN5	YDL147W	YGR021W	P53212	290 aa		6.58	□□□□□ -1.36
RPN5	YDL147W	PAP2	P53632	584 aa	Known RBP	6.58	□□□□□ -1.36
RPN5	YDL147W	TPO1	Q07824	586 aa		6.58	□□□□□ -1.36
RPN5	YDL147W	TRP3	P00937	484 aa		6.57	□□□□□ -1.36
RPN5	YDL147W	PGI1	P12709	554 aa	Known RBP	6.57	□□□□□ -1.36
RPN5	YDL147W	NGG1	P32494	702 aa		6.57	□□□□□ -1.36
RPN5	YDL147W	YBP2	P53169	641 aa		6.57	□□□□□ -1.36
RPN5	YDL147W	GTF1	P53260	183 aa	Predicted RBP	6.57	□□□□□ -1.36
RPN5	YDL147W	ETP1	P38748	585 aa	Known RBP	6.56	□□□□□ -1.36
RPN5	YDL147W	SSZ1	P38788	538 aa	Known RBP	6.56	□□□□□ -1.36
RPN5	YDL147W	SNO2	P53823	222 aa		6.56	□□□□□ -1.36
RPN5	YDL147W	ROT1	Q03691	256 aa		6.56	□□□□□ -1.36
RPN5	YDL147W	SGD1	Q06132	899 aa		6.56	□□□□□ -1.36
RPN5	YDL147W	HIS6	P40545	261 aa		6.55	□□□□□ -1.36
RPN5	YDL147W	RSC8	P43609	557 aa	Known RBP	6.55	□□□□□ -1.36
RPN5	YDL147W	MET12	P46151	657 aa		6.55	□□□□□ -1.36
RPN5	YDL147W	HOL1	P53389	586 aa		6.55	□□□□□ -1.36
RPN5	YDL147W	YMR210W	Q03649	449 aa		6.55	□□□□□ -1.36
RPN5	YDL147W	WHI4	Q07655	649 aa	Known RBP	6.55	□□□□□ -1.36
RPN5	YDL147W	UPC2	Q12151	913 aa		6.55	□□□□□ -1.36
RPN5	YDL147W	GLT1	Q12680	2145 aa	Known RBP	6.55	□□□□□ -1.36
RPN5	YDL147W	PIF1	P07271	859 aa		6.54	□□□□□ -1.36
RPN5	YDL147W	MRS6	P32864	603 aa	Known RBP	6.54	□□□□□ -1.36
RPN5	YDL147W	FAT1	P38225	669 aa		6.54	□□□□□ -1.36
RPN5	YDL147W	TOS1	P38288	455 aa		6.54	□□□□□ -1.36
RPN5	YDL147W	YHR202W	P38887	602 aa		6.54	□□□□□ -1.36
RPN5	YDL147W	URM1	P40554	99 aa	Predicted RBP	6.54	□□□□□ -1.36
RPN5	YDL147W	ARP4	P80428	489 aa		6.54	□□□□□ -1.36
RPN5	YDL147W	ECM38	Q05902	660 aa	Predicted RBP	6.54	□□□□□ -1.36
RPN5	YDL147W	ADY3	Q07732	790 aa		6.54	□□□□□ -1.36
RPN5	YDL147W	SWM1	Q12379	170 aa		6.54	□□□□□ -1.36
RPN5	YDL147W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	6.54	□□□□□ -1.36	not detected
RPN5	YDL147W	HIS5	P07172	385 aa		6.53	□□□□□ -1.36
RPN5	YDL147W	SWI6	P09959	803 aa		6.53	□□□□□ -1.36
RPN5	YDL147W	SER1	P33330	395 aa	Known RBP	6.53	□□□□□ -1.36
RPN5	YDL147W	APN2	P38207	520 aa		6.53	□□□□□ -1.36
RPN5	YDL147W	SET2	P46995	733 aa	Known RBP	6.53	□□□□□ -1.36
RPN5	YDL147W	PKH1	Q03407	766 aa		6.53	□□□□□ -1.36
RPN5	YDL147W	AKL1	P38080	1108 aa	Known RBP	6.52	□□□□□ -1.37
RPN5	YDL147W	LAM1	P38851	1228 aa		6.52	□□□□□ -1.37
RPN5	YDL147W	BEM4	P39011	633 aa		6.52	□□□□□ -1.37
RPN5	YDL147W	VHR1	P40522	640 aa		6.52	□□□□□ -1.37
RPN5	YDL147W	GCV2	P49095	1034 aa		6.52	□□□□□ -1.37
RPN5	YDL147W	BRE5	P53741	515 aa	Known RBP	6.52	□□□□□ -1.37
RPN5	YDL147W	PLB2	Q03674	706 aa		6.52	□□□□□ -1.37
RPN5	YDL147W	MUS81	Q04149	632 aa	Predicted RBP	6.52	□□□□□ -1.37
RPN5	YDL147W	DGR2	P32330	852 aa		6.51	□□□□□ -1.37
RPN5	YDL147W	YKR073C	P36153	106 aa		6.51	□□□□□ -1.37
RPN5	YDL147W	DUN1	P39009	513 aa		6.51	□□□□□ -1.37
RPN5	YDL147W	CNM67	P53865	581 aa	Known RBP	6.51	□□□□□ -1.37
RPN5	YDL147W	NOP15	P53927	220 aa	Predicted RBP	6.51	□□□□□ -1.37
RPN5	YDL147W	YLR407W	Q06070	228 aa		6.51	□□□□□ -1.37
RPN5	YDL147W	RXT3	Q07458	294 aa		6.51	□□□□□ -1.37
RPN5	YDL147W	PHO81	P17442	1178 aa		6.5	□□□□□ -1.37
RPN5	YDL147W	YHL041W	P38730	149 aa		6.5	□□□□□ -1.37
RPN5	YDL147W	IES5	P40060	125 aa		6.5	□□□□□ -1.37
RPN5	YDL147W	PFA3	P42836	336 aa		6.5	□□□□□ -1.37
RPN5	YDL147W	ENP2	P48234	707 aa	Known RBP	6.5	□□□□□ -1.37
RPN5	YDL147W	PSR2	Q07949	397 aa		6.5	□□□□□ -1.37
RPN5	YDL147W	GPB1	Q08886	897 aa		6.5	□□□□□ -1.37
RPN5	YDL147W	GLN4	P13188	809 aa	Known RBP	6.5	□□□□□ -1.37
RPN5	YDL147W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	6.5	□□□□□ -1.37	not detected
RPN5	YDL147W	MEF2	P39677	819 aa		6.5	□□□□□ -1.37
RPN5	YDL147W	VID28	P40547	921 aa		6.5	□□□□□ -1.37
RPN5	YDL147W	CHA4	P43634	648 aa		6.5	□□□□□ -1.37
RPN5	YDL147W	PRP31	P49704	494 aa	Predicted RBP	6.5	□□□□□ -1.37
RPN5	YDL147W	ASI2	P53895	289 aa		6.5	□□□□□ -1.37
RPN5	YDL147W	YDL121C	Q07541	149 aa		6.5	□□□□□ -1.37
RPN5	YDL147W	RPS17A	P02407	136 aa	Known RBP	6.49	□□□□□ -1.37
RPN5	YDL147W	RPS17B	P14127	136 aa	Known RBP	6.49	□□□□□ -1.37
RPN5	YDL147W	ATP12	P22135	325 aa		6.49	□□□□□ -1.37
RPN5	YDL147W	STE14	P32584	239 aa		6.49	□□□□□ -1.37
RPN5	YDL147W	LIP5	P32875	414 aa		6.49	□□□□□ -1.37
RPN5	YDL147W	APT2	P36973	181 aa		6.49	□□□□□ -1.37
RPN5	YDL147W	YBR259W	P38338	688 aa		6.49	□□□□□ -1.37
RPN5	YDL147W	SRP68	P38687	599 aa	Known RBP	6.49	□□□□□ -1.37
RPN5	YDL147W	RRP8	P38961	392 aa	Known RBP	6.49	□□□□□ -1.37
RPN5	YDL147W	SAW1	P39735	261 aa		6.49	□□□□□ -1.37
RPN5	YDL147W	EXG2	P52911	562 aa		6.49	□□□□□ -1.37
RPN5	YDL147W	LEE1	Q02799	301 aa	Known RBP	6.49	□□□□□ -1.37
RPN5	YDL147W	ASM4	Q05166	528 aa		6.49	□□□□□ -1.37
RPN5	YDL147W	BRE4	Q07660	1125 aa		6.49	□□□□□ -1.37
RPN5	YDL147W	ISA1	Q07821	250 aa	Predicted RBP	6.49	□□□□□ -1.37
RPN5	YDL147W	VHS3	Q08438	674 aa		6.49	□□□□□ -1.37
RPN5	YDL147W	CWC2	Q12046	339 aa	Predicted RBP	6.49	□□□□□ -1.37

Retrieved 100 of 5,963 RNA–protein pairs in 63.5 ms