RNA–Protein interactions for RNA: YDL091C

UBX3, Transcript of Subunit of the DSC ubiquitin ligase complex, yeastyeast

Gene UBX3, Length 1,368 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBX3YDL091C PEX6P33760 1030 aa4.33□□□□□ -1.72
UBX3YDL091C DSS1P39112 969 aa4.33□□□□□ -1.72
UBX3YDL091C HOS4P40480 1083 aa4.33□□□□□ -1.72
UBX3YDL091C BAP3P41815 604 aa4.33□□□□□ -1.72
UBX3YDL091C TEX1P53851 422 aaKnown RBP4.33□□□□□ -1.72
UBX3YDL091C MIP6P38760 659 aaKnown RBP4.32□□□□□ -1.72
UBX3YDL091C YBP2P53169 641 aa4.32□□□□□ -1.72
UBX3YDL091C POB3Q04636 552 aaKnown RBP4.32□□□□□ -1.72
UBX3YDL091C HOG1P32485 435 aa4.31□□□□□ -1.72
UBX3YDL091C YEL1P34225 687 aa4.31□□□□□ -1.72
UBX3YDL091C APL2P36000 726 aaPredicted RBP4.31□□□□□ -1.72
UBX3YDL091C YFL052WP43551 465 aa4.31□□□□□ -1.72
UBX3YDL091C PRP31P49704 494 aaPredicted RBP4.31□□□□□ -1.72
UBX3YDL091C NPY1P53164 384 aa4.31□□□□□ -1.72
UBX3YDL091C RIA1P53893 1110 aa4.31□□□□□ -1.72
UBX3YDL091C NHX1Q04121 633 aa4.31□□□□□ -1.72
UBX3YDL091C COG8Q04632 607 aa4.31□□□□□ -1.72
UBX3YDL091C GAD1Q04792 585 aa4.31□□□□□ -1.72
UBX3YDL091C HBT1Q07653 1046 aaKnown RBP4.31□□□□□ -1.72
UBX3YDL091C IRC13Q08630 104 aa4.31□□□□□ -1.72
UBX3YDL091C Q0142Q9ZZW4 58 aa4.31□□□□□ -1.72
UBX3YDL091C ADE2P21264 571 aaKnown RBP4.3□□□□□ -1.72
UBX3YDL091C HSL7P38274 827 aa4.3□□□□□ -1.72
UBX3YDL091C BCD1P38772 366 aa4.3□□□□□ -1.72
UBX3YDL091C FMP52P40008 231 aa4.3□□□□□ -1.72
UBX3YDL091C SDS3P40505 327 aa4.3□□□□□ -1.72
UBX3YDL091C QRI1P43123 477 aaKnown RBP4.3□□□□□ -1.72
UBX3YDL091C UBC11P52492 156 aa4.3□□□□□ -1.72
UBX3YDL091C ORC4P54791 529 aa4.3□□□□□ -1.72
UBX3YDL091C ARG5,6Q01217 863 aa4.3□□□□□ -1.72
UBX3YDL091C IRC10Q08118 586 aa4.3□□□□□ -1.72
UBX3YDL091C NTG2Q08214 380 aa4.3□□□□□ -1.72
UBX3YDL091C SGO1Q08490 590 aa4.3□□□□□ -1.72
UBX3YDL091C MTH1P35198 433 aa4.29□□□□□ -1.72
UBX3YDL091C RRP14P36080 434 aaKnown RBP4.29□□□□□ -1.72
UBX3YDL091C YKR018CP36114 725 aa4.29□□□□□ -1.72
UBX3YDL091C YKR051WP36142 418 aa4.29□□□□□ -1.72
UBX3YDL091C YHR112CP38716 378 aa4.29□□□□□ -1.72
UBX3YDL091C MCM21Q06675 368 aa4.29□□□□□ -1.72
UBX3YDL091C MET6P05694 767 aaKnown RBP4.28□□□□□ -1.72
UBX3YDL091C PCL2P25693 308 aa4.28□□□□□ -1.72
UBX3YDL091C GID8P40208 455 aa4.28□□□□□ -1.72
UBX3YDL091C STU2P46675 888 aa4.28□□□□□ -1.72
UBX3YDL091C GND2P53319 492 aa4.28□□□□□ -1.72
UBX3YDL091C RPN7Q06103 429 aaKnown RBP4.28□□□□□ -1.72
UBX3YDL091C SIR3P06701 978 aa4.27□□□□□ -1.73
UBX3YDL091C RAD18P10862 487 aa4.27□□□□□ -1.73
UBX3YDL091C HIR1P32479 840 aa4.27□□□□□ -1.73
UBX3YDL091C HIS7P33734 552 aaKnown RBP4.27□□□□□ -1.73
UBX3YDL091C TRZ1P36159 838 aaPredicted RBP4.27□□□□□ -1.73
UBX3YDL091C CCT3P39077 534 aaKnown RBP4.27□□□□□ -1.73
UBX3YDL091C TEL2P53038 688 aa4.27□□□□□ -1.73
UBX3YDL091C PCL10P53124 433 aa4.27□□□□□ -1.73
UBX3YDL091C HMO1Q03973 246 aaKnown RBP4.27□□□□□ -1.73
UBX3YDL091C ATG33Q06485 197 aa4.27□□□□□ -1.73
UBX3YDL091C SPC42P36094 363 aa4.27□□□□□ -1.73
UBX3YDL091C APT2P36973 181 aa4.27□□□□□ -1.73
UBX3YDL091C PCM1P38628 557 aaKnown RBP4.27□□□□□ -1.73
UBX3YDL091C PCL5P38794 229 aa4.27□□□□□ -1.73
UBX3YDL091C LYS9P38999 446 aa4.27□□□□□ -1.73
UBX3YDL091C MTL1P53214 551 aa4.27□□□□□ -1.73
UBX3YDL091C YAP1802P53309 568 aa4.27□□□□□ -1.73
UBX3YDL091C ALG12P53730 551 aa4.27□□□□□ -1.73
UBX3YDL091C CTK1Q03957 528 aaKnown RBP4.27□□□□□ -1.73
UBX3YDL091C YLR001CQ07895 862 aa4.27□□□□□ -1.73
UBX3YDL091C UBC9P50623 157 aaPredicted RBP4.26□□□□□ -1.73
UBX3YDL091C RNH70P53331 553 aa4.26□□□□□ -1.73
UBX3YDL091C ORC1P54784 914 aaPredicted RBP4.26□□□□□ -1.73
UBX3YDL091C ARP4P80428 489 aa4.26□□□□□ -1.73
UBX3YDL091C REC102Q02721 264 aa4.26□□□□□ -1.73
UBX3YDL091C MSL5Q12186 476 aaKnown RBP RIP-Chip data4.26□□□□□ -1.73not detected
UBX3YDL091C HRP1Q99383 534 aaKnown RBP4.26□□□□□ -1.73
UBX3YDL091C HMG1P12683 1054 aa4.25□□□□□ -1.73
UBX3YDL091C SFL1P20134 766 aa4.25□□□□□ -1.73
UBX3YDL091C CCR4P31384 837 aaKnown RBP4.25□□□□□ -1.73
UBX3YDL091C FMO1P38866 432 aa4.25□□□□□ -1.73
UBX3YDL091C REV7P38927 245 aa4.25□□□□□ -1.73
UBX3YDL091C NUP60P39705 539 aa4.25□□□□□ -1.73
UBX3YDL091C SSL2Q00578 843 aa4.25□□□□□ -1.73
UBX3YDL091C MRH1Q12117 320 aaPredicted RBP4.25□□□□□ -1.73
UBX3YDL091C GIN4Q12263 1142 aa4.25□□□□□ -1.73
UBX3YDL091C YKL033W-AQ86ZR7 236 aa4.25□□□□□ -1.73
UBX3YDL091C ERG6P25087 383 aaKnown RBP4.24□□□□□ -1.73
UBX3YDL091C DOT6P40059 670 aaKnown RBP4.24□□□□□ -1.73
UBX3YDL091C AIM14P53109 570 aa4.24□□□□□ -1.73
UBX3YDL091C SMX3P54999 86 aaPredicted RBP4.24□□□□□ -1.73
UBX3YDL091C PYC1P11154 1178 aaKnown RBP4.23□□□□□ -1.73
UBX3YDL091C RNR1P21524 888 aaKnown RBP4.23□□□□□ -1.73
UBX3YDL091C SSZ1P38788 538 aaKnown RBP4.23□□□□□ -1.73
UBX3YDL091C GET2P40056 285 aa4.23□□□□□ -1.73
UBX3YDL091C PAN2P53010 1115 aaPredicted RBP4.23□□□□□ -1.73
UBX3YDL091C BRE5P53741 515 aaKnown RBP4.23□□□□□ -1.73
UBX3YDL091C YNL193WP53870 558 aa4.23□□□□□ -1.73
UBX3YDL091C LEE1Q02799 301 aaKnown RBP4.23□□□□□ -1.73
UBX3YDL091C TFB2Q02939 513 aa4.23□□□□□ -1.73
UBX3YDL091C MVD1P32377 396 aaKnown RBP4.22□□□□□ -1.73
UBX3YDL091C PPG1P32838 368 aa4.22□□□□□ -1.73
UBX3YDL091C MNN4P36044 1178 aa4.22□□□□□ -1.73
UBX3YDL091C HRB1P38922 454 aaKnown RBP RIP-Chip data4.22□□□□□ -1.73not detected
UBX3YDL091C SET2P46995 733 aaKnown RBP4.22□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 40.6 ms