RNA–Protein interactions for RNA: YDL058W

USO1, Transcript of Essential protein involved in vesicle-mediated ER to Golgi transport, yeastyeast

Gene USO1, Length 5,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USO1YDL058W TY1B-GR3Q12316 1755 aa2.14□□□□□ -2.07
USO1YDL058W TY1B-ORQ92393 1755 aa2.14□□□□□ -2.07
USO1YDL058W PIF1P07271 859 aa2.14□□□□□ -2.07
USO1YDL058W YEF3P16521 1044 aaKnown RBP2.14□□□□□ -2.07
USO1YDL058W SAR1P20606 190 aaKnown RBP2.14□□□□□ -2.07
USO1YDL058W AFT1P22149 690 aa2.14□□□□□ -2.07
USO1YDL058W CPR2P23285 205 aa2.14□□□□□ -2.07
USO1YDL058W PRE8P23639 250 aa2.14□□□□□ -2.07
USO1YDL058W RAD16P31244 790 aa2.14□□□□□ -2.07
USO1YDL058W NIC96P34077 839 aa2.14□□□□□ -2.07
USO1YDL058W AGP2P38090 596 aa2.14□□□□□ -2.07
USO1YDL058W AXL1P40851 1208 aa2.14□□□□□ -2.07
USO1YDL058W NUP85P46673 744 aa2.14□□□□□ -2.07
USO1YDL058W ROM1P53046 1155 aa2.14□□□□□ -2.07
USO1YDL058W SLD3P53135 668 aa2.14□□□□□ -2.07
USO1YDL058W NOG2P53742 486 aaKnown RBP2.14□□□□□ -2.07
USO1YDL058W IPI3P53877 555 aa2.14□□□□□ -2.07
USO1YDL058W ADA2Q02336 434 aa2.14□□□□□ -2.07
USO1YDL058W MUK1Q02866 612 aa2.14□□□□□ -2.07
USO1YDL058W ADI1Q03677 179 aa2.14□□□□□ -2.07
USO1YDL058W DON1Q05610 365 aa2.14□□□□□ -2.07
USO1YDL058W YPD1Q07688 167 aa2.14□□□□□ -2.07
USO1YDL058W YLL032CQ07834 825 aaKnown RBP RIP-Chip data2.14□□□□□ -2.07not detected
USO1YDL058W PSK2Q08217 1101 aa2.14□□□□□ -2.07
USO1YDL058W SNF8Q12483 233 aa2.14□□□□□ -2.07
USO1YDL058W ESC1Q03661 1658 aaKnown RBP2.14□□□□□ -2.07
USO1YDL058W BNI1P41832 1953 aa2.14□□□□□ -2.07
USO1YDL058W RAD7P06779 565 aa2.14□□□□□ -2.07
USO1YDL058W OM45P16547 393 aa2.14□□□□□ -2.07
USO1YDL058W HPR1P17629 752 aaKnown RBP2.14□□□□□ -2.07
USO1YDL058W FAR1P21268 830 aa2.14□□□□□ -2.07
USO1YDL058W MRPL25P23369 157 aa2.14□□□□□ -2.07
USO1YDL058W RPL24BP24000 155 aaKnown RBP2.14□□□□□ -2.07
USO1YDL058W HIR2P32480 875 aa2.14□□□□□ -2.07
USO1YDL058W CSE1P33307 960 aa2.14□□□□□ -2.07
USO1YDL058W SGS1P35187 1447 aa2.14□□□□□ -2.07
USO1YDL058W RPC25P35718 212 aa2.14□□□□□ -2.07
USO1YDL058W SPC97P38863 823 aa2.14□□□□□ -2.07
USO1YDL058W RIO2P40160 425 aaKnown RBP2.14□□□□□ -2.07
USO1YDL058W KHA1P40309 873 aa2.14□□□□□ -2.07
USO1YDL058W DAK2P43550 591 aa2.14□□□□□ -2.07
USO1YDL058W CTF18P49956 741 aa2.14□□□□□ -2.07
USO1YDL058W SNP1Q00916 300 aaPredicted RBP2.14□□□□□ -2.07
USO1YDL058W PPM1Q04081 328 aa2.14□□□□□ -2.07
USO1YDL058W SPR28Q04921 423 aa2.14□□□□□ -2.07
USO1YDL058W YDL073WQ07454 984 aa2.14□□□□□ -2.07
USO1YDL058W TRM8Q12009 286 aa2.14□□□□□ -2.07
USO1YDL058W SRO7Q12038 1033 aa2.14□□□□□ -2.07
USO1YDL058W DNF1P32660 1571 aa2.14□□□□□ -2.07
USO1YDL058W RPL6BP05739 176 aaKnown RBP2.13□□□□□ -2.07
USO1YDL058W SYN8P31377 255 aa2.13□□□□□ -2.07
USO1YDL058W DUR3P33413 735 aa2.13□□□□□ -2.07
USO1YDL058W BDF1P35817 686 aa2.13□□□□□ -2.07
USO1YDL058W SHE3P38272 425 aaKnown RBP2.13□□□□□ -2.07
USO1YDL058W COS8P38723 381 aa2.13□□□□□ -2.07
USO1YDL058W YHI9P38765 294 aa2.13□□□□□ -2.07
USO1YDL058W YDR089WP38966 869 aa2.13□□□□□ -2.07
USO1YDL058W SPF1P39986 1215 aaKnown RBP2.13□□□□□ -2.07
USO1YDL058W GID8P40208 455 aa2.13□□□□□ -2.07
USO1YDL058W SER2P42941 309 aa2.13□□□□□ -2.07
USO1YDL058W GSM1P42950 618 aa2.13□□□□□ -2.07
USO1YDL058W NIT2P47016 307 aa2.13□□□□□ -2.07
USO1YDL058W VPS4P52917 437 aa2.13□□□□□ -2.07
USO1YDL058W OGG1P53397 376 aaPredicted RBP2.13□□□□□ -2.07
USO1YDL058W DUS1P53759 423 aaKnown RBP2.13□□□□□ -2.07
USO1YDL058W TRS130Q03660 1102 aa2.13□□□□□ -2.07
USO1YDL058W RPN9Q04062 393 aaKnown RBP2.13□□□□□ -2.07
USO1YDL058W GGA1Q06336 557 aa2.13□□□□□ -2.07
USO1YDL058W GIC2Q06648 383 aa2.13□□□□□ -2.07
USO1YDL058W CSR1Q06705 408 aaKnown RBP2.13□□□□□ -2.07
USO1YDL058W YDL124WQ07551 312 aaKnown RBP2.13□□□□□ -2.07
USO1YDL058W REC8Q12188 680 aa2.13□□□□□ -2.07
USO1YDL058W DBP10Q12389 995 aaKnown RBP2.13□□□□□ -2.07
USO1YDL058W SBP1P10080 294 aaKnown RBP2.13□□□□□ -2.07
USO1YDL058W VPS33P20795 691 aa2.13□□□□□ -2.07
USO1YDL058W SCJ1P25303 377 aa2.13□□□□□ -2.07
USO1YDL058W PSO2P30620 661 aa2.13□□□□□ -2.07
USO1YDL058W MRE11P32829 692 aa2.13□□□□□ -2.07
USO1YDL058W PTR2P32901 601 aa2.13□□□□□ -2.07
USO1YDL058W MIA40P36046 403 aa2.13□□□□□ -2.07
USO1YDL058W MAK5P38112 773 aaPredicted RBP2.13□□□□□ -2.07
USO1YDL058W NPT1P39683 429 aaKnown RBP2.13□□□□□ -2.07
USO1YDL058W PZF1P39933 429 aa2.13□□□□□ -2.07
USO1YDL058W PSY2P40164 858 aa2.13□□□□□ -2.07
USO1YDL058W YTA12P40341 825 aa2.13□□□□□ -2.07
USO1YDL058W HXT8P40886 569 aa2.13□□□□□ -2.07
USO1YDL058W MDJ2P42834 146 aa2.13□□□□□ -2.07
USO1YDL058W IML2P47031 731 aa2.13□□□□□ -2.07
USO1YDL058W YJR030CP47101 745 aa2.13□□□□□ -2.07
USO1YDL058W MIC26P50087 233 aa2.13□□□□□ -2.07
USO1YDL058W MLC1P53141 149 aa2.13□□□□□ -2.07
USO1YDL058W CSL4P53859 292 aaPredicted RBP2.13□□□□□ -2.07
USO1YDL058W SSK1Q07084 712 aa2.13□□□□□ -2.07
USO1YDL058W NSE1Q07913 336 aa2.13□□□□□ -2.07
USO1YDL058W SGT2Q12118 346 aaKnown RBP2.13□□□□□ -2.07
USO1YDL058W ECM5Q03214 1411 aa2.13□□□□□ -2.07
USO1YDL058W PAB1P04147 577 aaKnown RBP RIP-Chip data2.13□□□□□ -2.07not detected
USO1YDL058W GAL4P04386 881 aa2.13□□□□□ -2.07
USO1YDL058W NOT3P06102 836 aaKnown RBP2.13□□□□□ -2.07
USO1YDL058W POL30P15873 258 aaKnown RBP2.13□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 68.1 ms