RNA–Protein interactions for RNA: YDL053C

PBP4, Transcript of Pbp1p binding protein, yeast

Gene PBP4, Length 558 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PBP4	YDL053C	CHS7	P38843	316 aa		4.15	□□□□□ -1.75
PBP4	YDL053C	FPR3	P38911	411 aa	Known RBP	4.15	□□□□□ -1.75
PBP4	YDL053C	YJR142W	P47173	342 aa		4.15	□□□□□ -1.75
PBP4	YDL053C	MET13	P53128	600 aa		4.15	□□□□□ -1.75
PBP4	YDL053C	DLT1	Q04216	342 aa		4.15	□□□□□ -1.75
PBP4	YDL053C	TGL5	Q12043	749 aa		4.15	□□□□□ -1.75
PBP4	YDL053C	GIN4	Q12263	1142 aa		4.15	□□□□□ -1.75
PBP4	YDL053C	ADR1	P07248	1323 aa		4.15	□□□□□ -1.75
PBP4	YDL053C	CAF20	P12962	161 aa	Known RBP	4.14	□□□□□ -1.75
PBP4	YDL053C	YKR018C	P36114	725 aa		4.14	□□□□□ -1.75
PBP4	YDL053C	YBR053C	P38235	358 aa		4.14	□□□□□ -1.75
PBP4	YDL053C	YBR259W	P38338	688 aa		4.14	□□□□□ -1.75
PBP4	YDL053C	MIP6	P38760	659 aa	Known RBP	4.14	□□□□□ -1.75
PBP4	YDL053C	PCL10	P53124	433 aa		4.14	□□□□□ -1.75
PBP4	YDL053C	YBP2	P53169	641 aa		4.14	□□□□□ -1.75
PBP4	YDL053C	SLI1	P53304	468 aa		4.14	□□□□□ -1.75
PBP4	YDL053C	ORC4	P54791	529 aa		4.14	□□□□□ -1.75
PBP4	YDL053C	RNT1	Q02555	471 aa		4.14	□□□□□ -1.75
PBP4	YDL053C	YOL073C	Q08232	322 aa		4.14	□□□□□ -1.75
PBP4	YDL053C	FRE5	Q08908	694 aa		4.14	□□□□□ -1.75
PBP4	YDL053C	AIM44	Q99299	758 aa		4.14	□□□□□ -1.75
PBP4	YDL053C	ALG7	P07286	448 aa		4.13	□□□□□ -1.75
PBP4	YDL053C	CCR4	P31384	837 aa	Known RBP	4.13	□□□□□ -1.75
PBP4	YDL053C	ECM1	P39715	212 aa		4.13	□□□□□ -1.75
PBP4	YDL053C	MGS1	P40151	587 aa		4.13	□□□□□ -1.75
PBP4	YDL053C	PRP31	P49704	494 aa	Predicted RBP	4.13	□□□□□ -1.75
PBP4	YDL053C	SDA1	P53313	767 aa	Known RBP	4.13	□□□□□ -1.75
PBP4	YDL053C	DOS2	P54858	310 aa		4.13	□□□□□ -1.75
PBP4	YDL053C	ARP4	P80428	489 aa		4.13	□□□□□ -1.75
PBP4	YDL053C	PNS1	Q12412	539 aa		4.13	□□□□□ -1.75
PBP4	YDL053C	YGR161W-C	Q3E744	92 aa		4.13	□□□□□ -1.75
PBP4	YDL053C	PPR1	P07272	904 aa	Predicted RBP	4.12	□□□□□ -1.75
PBP4	YDL053C	ADE2	P21264	571 aa	Known RBP	4.12	□□□□□ -1.75
PBP4	YDL053C	SPC42	P36094	363 aa		4.12	□□□□□ -1.75
PBP4	YDL053C	BRN1	P38170	754 aa		4.12	□□□□□ -1.75
PBP4	YDL053C	YIR042C	P40586	236 aa		4.12	□□□□□ -1.75
PBP4	YDL053C	HLJ1	P48353	224 aa		4.12	□□□□□ -1.75
PBP4	YDL053C	AMA1	P50082	593 aa		4.12	□□□□□ -1.75
PBP4	YDL053C	TEX1	P53851	422 aa	Known RBP	4.12	□□□□□ -1.75
PBP4	YDL053C	ADY4	Q05955	493 aa		4.12	□□□□□ -1.75
PBP4	YDL053C	GUD1	Q07729	489 aa		4.12	□□□□□ -1.75
PBP4	YDL053C	LAT1	P12695	482 aa	Known RBP	4.11	□□□□□ -1.75
PBP4	YDL053C	MNN4	P36044	1178 aa		4.11	□□□□□ -1.75
PBP4	YDL053C	ARG5,6	Q01217	863 aa		4.11	□□□□□ -1.75
PBP4	YDL053C	LEE1	Q02799	301 aa	Known RBP	4.11	□□□□□ -1.75
PBP4	YDL053C	GAD1	Q04792	585 aa		4.11	□□□□□ -1.75
PBP4	YDL053C	ATG11	Q12527	1178 aa		4.11	□□□□□ -1.75
PBP4	YDL053C	APL2	P36000	726 aa	Predicted RBP	4.1	□□□□□ -1.75
PBP4	YDL053C	PPS1	P38148	807 aa		4.1	□□□□□ -1.75
PBP4	YDL053C	YHR112C	P38716	378 aa		4.1	□□□□□ -1.75
PBP4	YDL053C	HOS4	P40480	1083 aa		4.1	□□□□□ -1.75
PBP4	YDL053C	YJL163C	P46996	555 aa		4.1	□□□□□ -1.75
PBP4	YDL053C	CTF4	Q01454	927 aa		4.1	□□□□□ -1.75
PBP4	YDL053C	MCM21	Q06675	368 aa		4.1	□□□□□ -1.75
PBP4	YDL053C	IRC13	Q08630	104 aa		4.1	□□□□□ -1.75
PBP4	YDL053C	APT2	P36973	181 aa		4.09	□□□□□ -1.75
PBP4	YDL053C	GID8	P40208	455 aa		4.09	□□□□□ -1.75
PBP4	YDL053C	YNR029C	P53729	429 aa	Known RBP	4.09	□□□□□ -1.75
PBP4	YDL053C	BRE5	P53741	515 aa	Known RBP	4.09	□□□□□ -1.75
PBP4	YDL053C	YMR206W	Q03695	313 aa		4.09	□□□□□ -1.75
PBP4	YDL053C	OMS1	Q06668	471 aa		4.09	□□□□□ -1.75
PBP4	YDL053C	THI73	Q07904	523 aa		4.09	□□□□□ -1.75
PBP4	YDL053C	DCS2	Q12123	353 aa		4.09	□□□□□ -1.75
PBP4	YDL053C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected
PBP4	YDL053C	BCD1	P38772	366 aa		4.08	□□□□□ -1.76
PBP4	YDL053C	SSZ1	P38788	538 aa	Known RBP	4.08	□□□□□ -1.76
PBP4	YDL053C	CRP1	P38845	465 aa	Known RBP	4.08	□□□□□ -1.76
PBP4	YDL053C	BAP3	P41815	604 aa		4.08	□□□□□ -1.76
PBP4	YDL053C	YJR039W	P47107	1121 aa		4.08	□□□□□ -1.76
PBP4	YDL053C	YJR096W	P47137	282 aa		4.08	□□□□□ -1.76
PBP4	YDL053C	MUK1	Q02866	612 aa		4.08	□□□□□ -1.76
PBP4	YDL053C	NUP145	P49687	1317 aa		4.07	□□□□□ -1.76
PBP4	YDL053C	ERG6	P25087	383 aa	Known RBP	4.07	□□□□□ -1.76
PBP4	YDL053C	OAR1	P35731	278 aa		4.07	□□□□□ -1.76
PBP4	YDL053C	TRZ1	P36159	838 aa	Predicted RBP	4.07	□□□□□ -1.76
PBP4	YDL053C	APN2	P38207	520 aa		4.07	□□□□□ -1.76
PBP4	YDL053C	CKB2	P38930	258 aa		4.07	□□□□□ -1.76
PBP4	YDL053C	LYS9	P38999	446 aa		4.07	□□□□□ -1.76
PBP4	YDL053C	SET2	P46995	733 aa	Known RBP	4.07	□□□□□ -1.76
PBP4	YDL053C	MTL1	P53214	551 aa		4.07	□□□□□ -1.76
PBP4	YDL053C	CTK1	Q03957	528 aa	Known RBP	4.07	□□□□□ -1.76
PBP4	YDL053C	HMO1	Q03973	246 aa	Known RBP	4.07	□□□□□ -1.76
PBP4	YDL053C	HRP1	Q99383	534 aa	Known RBP	4.07	□□□□□ -1.76
PBP4	YDL053C	PYC1	P11154	1178 aa	Known RBP	4.06	□□□□□ -1.76
PBP4	YDL053C	RNR1	P21524	888 aa	Known RBP	4.06	□□□□□ -1.76
PBP4	YDL053C	PRP19	P32523	503 aa	Known RBP	4.06	□□□□□ -1.76
PBP4	YDL053C	HIS7	P33734	552 aa	Known RBP	4.06	□□□□□ -1.76
PBP4	YDL053C	TYS1	P36421	394 aa	Known RBP	4.06	□□□□□ -1.76
PBP4	YDL053C	MOH1	P38191	138 aa		4.06	□□□□□ -1.76
PBP4	YDL053C	FMO1	P38866	432 aa		4.06	□□□□□ -1.76
PBP4	YDL053C	CCT3	P39077	534 aa	Known RBP	4.06	□□□□□ -1.76
PBP4	YDL053C	NUG1	P40010	520 aa	Known RBP	4.06	□□□□□ -1.76
PBP4	YDL053C	RET2	P43621	546 aa		4.06	□□□□□ -1.76
PBP4	YDL053C	DAS1	P47005	663 aa		4.06	□□□□□ -1.76
PBP4	YDL053C	PMT3	P47190	753 aa		4.06	□□□□□ -1.76
PBP4	YDL053C	STB4	P50104	949 aa		4.06	□□□□□ -1.76
PBP4	YDL053C	UBC11	P52492	156 aa		4.06	□□□□□ -1.76
PBP4	YDL053C	REC102	Q02721	264 aa		4.06	□□□□□ -1.76
PBP4	YDL053C	UME1	Q03010	460 aa		4.06	□□□□□ -1.76
PBP4	YDL053C	MTQ2	Q03920	221 aa	Predicted RBP	4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 56.7 ms