RNA–Protein interactions for RNA: YBR182C

SMP1, Transcript of MADS-box transcription factor involved in osmotic stress response, yeast

Gene SMP1, Length 1,359 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMP1	YBR182C	ERR3	P42222	437 aa		5.69	□□□□□ -1.5
SMP1	YBR182C	YKE2	P52553	114 aa		5.69	□□□□□ -1.5
SMP1	YBR182C	TAD1	P53065	400 aa		5.69	□□□□□ -1.5
SMP1	YBR182C	TEP1	P53916	434 aa		5.69	□□□□□ -1.5
SMP1	YBR182C	YPR196W	Q06595	470 aa		5.69	□□□□□ -1.5
SMP1	YBR182C	HOP1	P20050	605 aa		5.68	□□□□□ -1.5
SMP1	YBR182C	OAF3	P36023	863 aa		5.68	□□□□□ -1.5
SMP1	YBR182C	RAD26	P40352	1085 aa		5.68	□□□□□ -1.5
SMP1	YBR182C	SHR5	P41912	237 aa		5.68	□□□□□ -1.5
SMP1	YBR182C	HXT16	P47185	567 aa		5.68	□□□□□ -1.5
SMP1	YBR182C	ASK10	P48361	1146 aa		5.68	□□□□□ -1.5
SMP1	YBR182C	TNA1	P53322	534 aa		5.68	□□□□□ -1.5
SMP1	YBR182C	HIM1	Q06674	414 aa		5.68	□□□□□ -1.5
SMP1	YBR182C	NBA1	Q08229	501 aa	Known RBP	5.68	□□□□□ -1.5
SMP1	YBR182C	YPL277C	Q08989	487 aa		5.68	□□□□□ -1.5
SMP1	YBR182C	KCS1	Q12494	1050 aa		5.68	□□□□□ -1.5
SMP1	YBR182C	MIH1	P23748	554 aa		5.67	□□□□□ -1.5
SMP1	YBR182C	SER1	P33330	395 aa	Known RBP	5.67	□□□□□ -1.5
SMP1	YBR182C	RRN3	P36070	627 aa		5.67	□□□□□ -1.5
SMP1	YBR182C	ESL1	P40456	1118 aa		5.67	□□□□□ -1.5
SMP1	YBR182C	ENV11	P53246	860 aa		5.67	□□□□□ -1.5
SMP1	YBR182C	RPS21B	Q3E754	87 aa	Known RBP	5.67	□□□□□ -1.5
SMP1	YBR182C	SEC65	P29478	273 aa		5.67	□□□□□ -1.5
SMP1	YBR182C	FUN30	P31380	1131 aa		5.67	□□□□□ -1.5
SMP1	YBR182C	RPC82	P32349	654 aa		5.67	□□□□□ -1.5
SMP1	YBR182C	SMY2	P32909	740 aa	Known RBP	5.67	□□□□□ -1.5
SMP1	YBR182C	SAP190	P36123	1033 aa		5.67	□□□□□ -1.5
SMP1	YBR182C	PPE1	P38796	400 aa		5.67	□□□□□ -1.5
SMP1	YBR182C	SAW1	P39735	261 aa		5.67	□□□□□ -1.5
SMP1	YBR182C	YFL052W	P43551	465 aa		5.67	□□□□□ -1.5
SMP1	YBR182C	YJL045W	P47052	634 aa		5.67	□□□□□ -1.5
SMP1	YBR182C	CEG1	Q01159	459 aa	Predicted RBP	5.67	□□□□□ -1.5
SMP1	YBR182C	SRT1	Q03175	343 aa		5.67	□□□□□ -1.5
SMP1	YBR182C	RPN7	Q06103	429 aa	Known RBP	5.67	□□□□□ -1.5
SMP1	YBR182C	TRE1	Q08919	783 aa		5.67	□□□□□ -1.5
SMP1	YBR182C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	5.67	□□□□□ -1.5	not detected
SMP1	YBR182C	YBR182C-A	Q8TGU6	64 aa		5.67	□□□□□ -1.5
SMP1	YBR182C	BI4	P03879	638 aa		5.66	□□□□□ -1.5
SMP1	YBR182C	GAS1	P22146	559 aa	Known RBP	5.66	□□□□□ -1.5
SMP1	YBR182C	NGG1	P32494	702 aa		5.66	□□□□□ -1.5
SMP1	YBR182C	YSC84	P32793	468 aa		5.66	□□□□□ -1.5
SMP1	YBR182C	SDS22	P36047	338 aa		5.66	□□□□□ -1.5
SMP1	YBR182C	GIC1	P38785	314 aa		5.66	□□□□□ -1.5
SMP1	YBR182C	OYE3	P41816	400 aa	Predicted RBP	5.66	□□□□□ -1.5
SMP1	YBR182C	MEP3	P53390	489 aa		5.66	□□□□□ -1.5
SMP1	YBR182C	LRS4	Q04087	347 aa	Known RBP	5.66	□□□□□ -1.5
SMP1	YBR182C	CRR1	Q05790	422 aa		5.66	□□□□□ -1.5
SMP1	YBR182C	SNU66	Q12420	587 aa	Predicted RBP	5.66	□□□□□ -1.5
SMP1	YBR182C	RPS9A	O13516	197 aa	Known RBP	5.65	□□□□□ -1.51
SMP1	YBR182C	COQ4	O13525	335 aa		5.65	□□□□□ -1.51
SMP1	YBR182C	YCL002C	P25565	263 aa		5.65	□□□□□ -1.51
SMP1	YBR182C	CYS3	P31373	394 aa	Known RBP	5.65	□□□□□ -1.51
SMP1	YBR182C	SET5	P38890	526 aa	Known RBP	5.65	□□□□□ -1.51
SMP1	YBR182C	KAP123	P40069	1113 aa	Known RBP	5.65	□□□□□ -1.51
SMP1	YBR182C	RRT14	P40470	206 aa		5.65	□□□□□ -1.51
SMP1	YBR182C	VTC2	P43585	828 aa		5.65	□□□□□ -1.51
SMP1	YBR182C	ALT1	P52893	592 aa		5.65	□□□□□ -1.51
SMP1	YBR182C	MTC3	P53077	123 aa		5.65	□□□□□ -1.51
SMP1	YBR182C	HLR1	Q04429	423 aa		5.65	□□□□□ -1.51
SMP1	YBR182C	CIA1	Q05583	330 aa		5.65	□□□□□ -1.51
SMP1	YBR182C	NUR1	Q12066	484 aa		5.65	□□□□□ -1.51
SMP1	YBR182C	OPI1	P21957	404 aa		5.64	□□□□□ -1.51
SMP1	YBR182C	XRS2	P33301	854 aa		5.64	□□□□□ -1.51
SMP1	YBR182C	YKR051W	P36142	418 aa		5.64	□□□□□ -1.51
SMP1	YBR182C	SHM2	P37291	469 aa	Known RBP	5.64	□□□□□ -1.51
SMP1	YBR182C	FAT1	P38225	669 aa		5.64	□□□□□ -1.51
SMP1	YBR182C	NPP2	P39997	493 aa		5.64	□□□□□ -1.51
SMP1	YBR182C	YIL092W	P40497	633 aa		5.64	□□□□□ -1.51
SMP1	YBR182C	SFB2	P53953	876 aa		5.64	□□□□□ -1.51
SMP1	YBR182C	SSY1	Q03770	852 aa		5.64	□□□□□ -1.51
SMP1	YBR182C	ARP7	Q12406	477 aa		5.64	□□□□□ -1.51
SMP1	YBR182C	ENT1	Q12518	454 aa		5.64	□□□□□ -1.51
SMP1	YBR182C	GFA1	P14742	717 aa	Known RBP	5.63	□□□□□ -1.51
SMP1	YBR182C	SNF5	P18480	905 aa		5.63	□□□□□ -1.51
SMP1	YBR182C	PHO3	P24031	467 aa		5.63	□□□□□ -1.51
SMP1	YBR182C	URA1	P28272	314 aa	Predicted RBP	5.63	□□□□□ -1.51
SMP1	YBR182C	SWI3	P32591	825 aa		5.63	□□□□□ -1.51
SMP1	YBR182C	RPS0A	P32905	252 aa	Known RBP	5.63	□□□□□ -1.51
SMP1	YBR182C	YKR018C	P36114	725 aa		5.63	□□□□□ -1.51
SMP1	YBR182C	YKR075C	P36155	307 aa		5.63	□□□□□ -1.51
SMP1	YBR182C	NMD3	P38861	518 aa	Known RBP	5.63	□□□□□ -1.51
SMP1	YBR182C	VPS8	P39702	1274 aa		5.63	□□□□□ -1.51
SMP1	YBR182C	SMK1	P41808	388 aa		5.63	□□□□□ -1.51
SMP1	YBR182C	YFL054C	P43549	646 aa		5.63	□□□□□ -1.51
SMP1	YBR182C	VIP1	Q06685	1146 aa	Known RBP	5.63	□□□□□ -1.51
SMP1	YBR182C	OSW2	Q12202	724 aa		5.63	□□□□□ -1.51
SMP1	YBR182C	PRC1	P00729	532 aa		5.62	□□□□□ -1.51
SMP1	YBR182C	SPS1	P08458	490 aa		5.62	□□□□□ -1.51
SMP1	YBR182C	MRP7	P12687	371 aa		5.62	□□□□□ -1.51
SMP1	YBR182C	ATP12	P22135	325 aa		5.62	□□□□□ -1.51
SMP1	YBR182C	SLC1	P33333	303 aa		5.62	□□□□□ -1.51
SMP1	YBR182C	PIK1	P39104	1066 aa		5.62	□□□□□ -1.51
SMP1	YBR182C	CEP3	P40969	608 aa		5.62	□□□□□ -1.51
SMP1	YBR182C	ZIP2	P53061	704 aa		5.62	□□□□□ -1.51
SMP1	YBR182C	GPD1	Q00055	391 aa	Known RBP	5.62	□□□□□ -1.51
SMP1	YBR182C	TPP1	Q03796	238 aa		5.62	□□□□□ -1.51
SMP1	YBR182C	OMS1	Q06668	471 aa		5.62	□□□□□ -1.51
SMP1	YBR182C	GRC3	Q07845	632 aa		5.62	□□□□□ -1.51
SMP1	YBR182C	YVC1	Q12324	675 aa		5.62	□□□□□ -1.51
SMP1	YBR182C	CCZ1	P38273	704 aa		5.61	□□□□□ -1.51

Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms