RNA–Protein interactions for RNA: YAL011W

SWC3, Transcript of Protein of unknown function, yeast

Gene SWC3, Length 1,878 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWC3	YAL011W	DUG1	P43616	481 aa	Known RBP	4.93	□□□□□ -1.62
SWC3	YAL011W	YML6	P51998	286 aa		4.93	□□□□□ -1.62
SWC3	YAL011W	YDR286C	Q05530	114 aa		4.93	□□□□□ -1.62
SWC3	YAL011W	CFT2	Q12102	859 aa	Predicted RBP	4.93	□□□□□ -1.62
SWC3	YAL011W	RRG1	Q12167	365 aa	Predicted RBP	4.93	□□□□□ -1.62
SWC3	YAL011W	NUC1	P08466	329 aa		4.92	□□□□□ -1.62
SWC3	YAL011W	RPS6A	P0CX37	236 aa	Known RBP	4.92	□□□□□ -1.62
SWC3	YAL011W	RPS6B	P0CX38	236 aa	Predicted RBP	4.92	□□□□□ -1.62
SWC3	YAL011W	PXL1	P36166	706 aa		4.92	□□□□□ -1.62
SWC3	YAL011W	HXT5	P38695	592 aa		4.92	□□□□□ -1.62
SWC3	YAL011W	LRP1	P38801	184 aa	Known RBP	4.92	□□□□□ -1.62
SWC3	YAL011W	CTM1	P38818	585 aa		4.92	□□□□□ -1.62
SWC3	YAL011W	CCT3	P39077	534 aa	Known RBP	4.92	□□□□□ -1.62
SWC3	YAL011W	ACA1	P39970	489 aa		4.92	□□□□□ -1.62
SWC3	YAL011W	FYV8	P46949	817 aa	Known RBP	4.92	□□□□□ -1.62
SWC3	YAL011W	IML2	P47031	731 aa		4.92	□□□□□ -1.62
SWC3	YAL011W	ASE1	P50275	885 aa		4.92	□□□□□ -1.62
SWC3	YAL011W	TAN1	P53072	289 aa	Predicted RBP	4.92	□□□□□ -1.62
SWC3	YAL011W	VPS60	Q03390	229 aa		4.92	□□□□□ -1.62
SWC3	YAL011W	EBS1	Q03466	884 aa	Known RBP	4.92	□□□□□ -1.62
SWC3	YAL011W	TRS130	Q03660	1102 aa		4.92	□□□□□ -1.62
SWC3	YAL011W	DPL1	Q05567	589 aa		4.92	□□□□□ -1.62
SWC3	YAL011W	SPP382	Q06411	708 aa	Predicted RBP	4.92	□□□□□ -1.62
SWC3	YAL011W	ACK1	Q07622	623 aa	Predicted RBP	4.92	□□□□□ -1.62
SWC3	YAL011W	RSC58	Q07979	502 aa		4.92	□□□□□ -1.62
SWC3	YAL011W	TLG2	Q08144	397 aa		4.92	□□□□□ -1.62
SWC3	YAL011W	SLK19	Q08581	821 aa	Known RBP	4.92	□□□□□ -1.62
SWC3	YAL011W	ATG9	Q12142	997 aa		4.92	□□□□□ -1.62
SWC3	YAL011W	AFG2	P32794	780 aa		4.92	□□□□□ -1.62
SWC3	YAL011W	SMC1	P32908	1225 aa		4.92	□□□□□ -1.62
SWC3	YAL011W	PET10	P36139	283 aa		4.92	□□□□□ -1.62
SWC3	YAL011W	ERG7	P38604	731 aa		4.92	□□□□□ -1.62
SWC3	YAL011W	TCD1	P38756	429 aa		4.92	□□□□□ -1.62
SWC3	YAL011W	MXR1	P40029	184 aa		4.92	□□□□□ -1.62
SWC3	YAL011W	SEC26	P41810	973 aa	Known RBP	4.92	□□□□□ -1.62
SWC3	YAL011W	CIT3	P43635	486 aa		4.92	□□□□□ -1.62
SWC3	YAL011W	CCT8	P47079	568 aa	Known RBP	4.92	□□□□□ -1.62
SWC3	YAL011W	YGR153W	P48238	217 aa		4.92	□□□□□ -1.62
SWC3	YAL011W	APT1	P49435	187 aa	Known RBP	4.92	□□□□□ -1.62
SWC3	YAL011W	PEX21	P50091	288 aa		4.92	□□□□□ -1.62
SWC3	YAL011W	KXD1	P53158	218 aa		4.92	□□□□□ -1.62
SWC3	YAL011W	NPY1	P53164	384 aa		4.92	□□□□□ -1.62
SWC3	YAL011W	MEP3	P53390	489 aa		4.92	□□□□□ -1.62
SWC3	YAL011W	RET3	P53600	189 aa		4.92	□□□□□ -1.62
SWC3	YAL011W	DSE4	P53753	1117 aa		4.92	□□□□□ -1.62
SWC3	YAL011W	MTQ2	Q03920	221 aa	Predicted RBP	4.92	□□□□□ -1.62
SWC3	YAL011W	YLH47	Q06493	454 aa		4.92	□□□□□ -1.62
SWC3	YAL011W	YOL075C	Q08234	1294 aa		4.92	□□□□□ -1.62
SWC3	YAL011W	YPL216W	Q08964	1102 aa		4.92	□□□□□ -1.62
SWC3	YAL011W	PCL8	Q08966	492 aa		4.92	□□□□□ -1.62
SWC3	YAL011W	YDL206W	Q12424	762 aa		4.92	□□□□□ -1.62
SWC3	YAL011W	FKS1	P38631	1876 aa	Known RBP	4.92	□□□□□ -1.62
SWC3	YAL011W	GCR1	P07261	785 aa		4.91	□□□□□ -1.62
SWC3	YAL011W	AEP2	P22136	580 aa		4.91	□□□□□ -1.62
SWC3	YAL011W	RAD16	P31244	790 aa		4.91	□□□□□ -1.62
SWC3	YAL011W	LTV1	P34078	463 aa		4.91	□□□□□ -1.62
SWC3	YAL011W	TBS1	P38114	1094 aa		4.91	□□□□□ -1.62
SWC3	YAL011W	KTR4	P38131	464 aa		4.91	□□□□□ -1.62
SWC3	YAL011W	MIP6	P38760	659 aa	Known RBP	4.91	□□□□□ -1.62
SWC3	YAL011W	SEC9	P40357	651 aa		4.91	□□□□□ -1.62
SWC3	YAL011W	GPD2	P41911	440 aa	Known RBP	4.91	□□□□□ -1.62
SWC3	YAL011W	AIP1	P46680	615 aa	Known RBP	4.91	□□□□□ -1.62
SWC3	YAL011W	NIT2	P47016	307 aa		4.91	□□□□□ -1.62
SWC3	YAL011W	PRP31	P49704	494 aa	Predicted RBP	4.91	□□□□□ -1.62
SWC3	YAL011W	ELA1	P53861	379 aa	Predicted RBP	4.91	□□□□□ -1.62
SWC3	YAL011W	BNI5	P53890	448 aa	Known RBP	4.91	□□□□□ -1.62
SWC3	YAL011W	KIN4	Q01919	800 aa		4.91	□□□□□ -1.62
SWC3	YAL011W	CSM3	Q04659	317 aa		4.91	□□□□□ -1.62
SWC3	YAL011W	VPS38	Q05919	439 aa		4.91	□□□□□ -1.62
SWC3	YAL011W	YCS4	Q06156	1176 aa		4.91	□□□□□ -1.62
SWC3	YAL011W	YPR097W	Q06839	1073 aa		4.91	□□□□□ -1.62
SWC3	YAL011W	YDL124W	Q07551	312 aa	Known RBP	4.91	□□□□□ -1.62
SWC3	YAL011W	CTT1	P06115	562 aa		4.9	□□□□□ -1.62
SWC3	YAL011W	SPO16	P17122	198 aa		4.9	□□□□□ -1.62
SWC3	YAL011W	SAM2	P19358	384 aa	Known RBP	4.9	□□□□□ -1.62
SWC3	YAL011W	UBC1	P21734	215 aa	Known RBP	4.9	□□□□□ -1.62
SWC3	YAL011W	POL4	P25615	582 aa		4.9	□□□□□ -1.62
SWC3	YAL011W	MKK2	P32491	506 aa		4.9	□□□□□ -1.62
SWC3	YAL011W	RPC25	P35718	212 aa		4.9	□□□□□ -1.62
SWC3	YAL011W	VBA5	P36172	582 aa		4.9	□□□□□ -1.62
SWC3	YAL011W	GNP1	P48813	663 aa		4.9	□□□□□ -1.62
SWC3	YAL011W	OCA1	P50946	238 aa	Predicted RBP	4.9	□□□□□ -1.62
SWC3	YAL011W	CAF130	P53280	1122 aa	Predicted RBP	4.9	□□□□□ -1.62
SWC3	YAL011W	ADI1	Q03677	179 aa		4.9	□□□□□ -1.62
SWC3	YAL011W	YMR018W	Q04364	514 aa		4.9	□□□□□ -1.62
SWC3	YAL011W	ADY4	Q05955	493 aa		4.9	□□□□□ -1.62
SWC3	YAL011W	SKG3	Q06315	1026 aa		4.9	□□□□□ -1.62
SWC3	YAL011W	SUE1	Q06524	206 aa		4.9	□□□□□ -1.62
SWC3	YAL011W	APC5	Q08683	685 aa		4.9	□□□□□ -1.62
SWC3	YAL011W	SPO21	Q12411	609 aa		4.9	□□□□□ -1.62
SWC3	YAL011W	PET111	P08468	800 aa		4.9	□□□□□ -1.63
SWC3	YAL011W	PRP9	P19736	530 aa	Known RBP	4.9	□□□□□ -1.63
SWC3	YAL011W	SPO11	P23179	398 aa		4.9	□□□□□ -1.63
SWC3	YAL011W	MCM5	P29496	775 aa	Known RBP	4.9	□□□□□ -1.63
SWC3	YAL011W	SEA4	P38164	1038 aa		4.9	□□□□□ -1.63
SWC3	YAL011W	YBL028C	P38202	106 aa		4.9	□□□□□ -1.63
SWC3	YAL011W	EFM2	P38347	419 aa		4.9	□□□□□ -1.63
SWC3	YAL011W	VPS45	P38932	577 aa		4.9	□□□□□ -1.63
SWC3	YAL011W	PIC2	P40035	300 aa		4.9	□□□□□ -1.63
SWC3	YAL011W	HIS6	P40545	261 aa		4.9	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 34.3 ms