RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 CADPS2Q86UW7 1296 aa19.53■□□□□ 0.72
HNRNPU-228ENST00000640306 CABLES1Q8TDN4 633 aa19.53■□□□□ 0.72
HNRNPU-228ENST00000640306 HMG20BQ9P0W2 317 aa19.53■□□□□ 0.72
HNRNPU-228ENST00000640306 SCRN1Q12765 414 aa19.53■□□□□ 0.72
HNRNPU-228ENST00000640306 CLSTN2Q9H4D0 955 aa19.53■□□□□ 0.72
HNRNPU-228ENST00000640306 SLC52A2Q9HAB3 445 aa19.53■□□□□ 0.72
HNRNPU-228ENST00000640306 NCOA5Q9HCD5 579 aaKnown RBP19.53■□□□□ 0.72
HNRNPU-228ENST00000640306 SNRKQ9NRH2 765 aa19.53■□□□□ 0.72
HNRNPU-228ENST00000640306 ZNF609O15014 1411 aa19.53■□□□□ 0.72
HNRNPU-228ENST00000640306 STOX1Q6ZVD7 989 aa19.52■□□□□ 0.72
HNRNPU-228ENST00000640306 TAOK2Q9UL54 1235 aa19.52■□□□□ 0.72
HNRNPU-228ENST00000640306 LMO7Q8WWI1 1683 aa19.52■□□□□ 0.72
HNRNPU-228ENST00000640306 ATP5JP18859 108 aa19.52■□□□□ 0.72
HNRNPU-228ENST00000640306 APOBRQ0VD83 1088 aa19.52■□□□□ 0.72
HNRNPU-228ENST00000640306 DDX19AQ9NUU7 478 aaKnown RBP19.52■□□□□ 0.72
HNRNPU-228ENST00000640306 GOLIM4O00461 696 aa19.52■□□□□ 0.71
HNRNPU-228ENST00000640306 CSB-PGBD3P0DP91 1061 aa19.52■□□□□ 0.71
HNRNPU-228ENST00000640306 CBX1P83916 185 aa19.52■□□□□ 0.71
HNRNPU-228ENST00000640306 CHAF1AQ13111 956 aaPredicted RBP19.52■□□□□ 0.71
HNRNPU-228ENST00000640306 RESTQ13127 1097 aa19.52■□□□□ 0.71
HNRNPU-228ENST00000640306 MTERF4Q7Z6M4 381 aaKnown RBP19.52■□□□□ 0.71
HNRNPU-228ENST00000640306 RFX5P48382 616 aaPredicted RBP19.51■□□□□ 0.71
HNRNPU-228ENST00000640306 TIMM10P62072 90 aa19.51■□□□□ 0.71
HNRNPU-228ENST00000640306 LMBR1LQ6UX01 489 aa19.51■□□□□ 0.71
HNRNPU-228ENST00000640306 TTC5Q8N0Z6 440 aa19.5■□□□□ 0.71
HNRNPU-228ENST00000640306 COPRSQ9NQ92 184 aa19.5■□□□□ 0.71
HNRNPU-228ENST00000640306 MCMDC2Q4G0Z9 681 aa19.5■□□□□ 0.71
HNRNPU-228ENST00000640306 PPP4R3BQ5MIZ7 849 aa19.5■□□□□ 0.71
HNRNPU-228ENST00000640306 NCAPD2Q15021 1401 aa19.5■□□□□ 0.71
HNRNPU-228ENST00000640306 ERBB3P21860 1342 aa19.5■□□□□ 0.71
HNRNPU-228ENST00000640306 ZNF75DP51815 510 aa19.49■□□□□ 0.71
HNRNPU-228ENST00000640306 KRT32Q14532 448 aa19.49■□□□□ 0.71
HNRNPU-228ENST00000640306 SPDYE4A6NLX3 237 aa19.49■□□□□ 0.71
HNRNPU-228ENST00000640306 ARID5BQ14865 1188 aa19.49■□□□□ 0.71
HNRNPU-228ENST00000640306 CHRNA2Q15822 529 aa19.49■□□□□ 0.71
HNRNPU-228ENST00000640306 USPL1Q5W0Q7 1092 aa19.49■□□□□ 0.71
HNRNPU-228ENST00000640306 CCDC94Q9BW85 323 aaPredicted RBP19.49■□□□□ 0.71
HNRNPU-228ENST00000640306 CCDC144BQ3MJ40 725 aa19.48■□□□□ 0.71
HNRNPU-228ENST00000640306 C11orf57Q6ZUT1 292 aaPredicted RBP19.48■□□□□ 0.71
HNRNPU-228ENST00000640306 CCDC144CPQ8IYA2 1237 aa19.48■□□□□ 0.71
HNRNPU-228ENST00000640306 CLIP2Q9UDT6 1046 aa19.48■□□□□ 0.71
HNRNPU-228ENST00000640306 U3KPZ7 1027 aaPredicted RBP19.48■□□□□ 0.71
HNRNPU-228ENST00000640306 PHKG2P15735 406 aa19.48■□□□□ 0.71
HNRNPU-228ENST00000640306 GTF2F1P35269 517 aaKnown RBP eCLIP19.48■□□□□ 0.719e-8■■■□□ 18.9
HNRNPU-228ENST00000640306 TSGA10IPQ3SY00 556 aa19.48■□□□□ 0.71
HNRNPU-228ENST00000640306 TPM3P06753 285 aa19.47■□□□□ 0.71
HNRNPU-228ENST00000640306 ZSCAN25Q6NSZ9 544 aa19.47■□□□□ 0.71
HNRNPU-228ENST00000640306 USP54Q70EL1 1684 aa19.47■□□□□ 0.71
HNRNPU-228ENST00000640306 KDM6AO15550 1401 aaPredicted RBP19.47■□□□□ 0.71
HNRNPU-228ENST00000640306 PTPDC1A2A3K4 754 aa19.47■□□□□ 0.71
HNRNPU-228ENST00000640306 TATP17735 454 aaPredicted RBP19.47■□□□□ 0.71
HNRNPU-228ENST00000640306 CCAR1Q8IX12 1150 aaKnown RBP19.47■□□□□ 0.71
HNRNPU-228ENST00000640306 CACTINQ8WUQ7 758 aaKnown RBP19.47■□□□□ 0.71
HNRNPU-228ENST00000640306 ZNF592Q92610 1267 aa19.47■□□□□ 0.71
HNRNPU-228ENST00000640306 ZNF594Q96JF6 807 aaPredicted RBP19.47■□□□□ 0.71
HNRNPU-228ENST00000640306 RAB11FIP4Q86YS3 637 aa19.46■□□□□ 0.71
HNRNPU-228ENST00000640306 GOLPH3LQ9H4A5 285 aa19.46■□□□□ 0.71
HNRNPU-228ENST00000640306 ATP2B3Q16720 1220 aa19.46■□□□□ 0.71
HNRNPU-228ENST00000640306 BRINP3Q76B58 766 aa19.46■□□□□ 0.71
HNRNPU-228ENST00000640306 USP28Q96RU2 1077 aa19.46■□□□□ 0.71
HNRNPU-228ENST00000640306 HAUS7Q99871 368 aa19.46■□□□□ 0.71
HNRNPU-228ENST00000640306 ALDH8A1Q9H2A2 487 aaPredicted RBP19.46■□□□□ 0.71
HNRNPU-228ENST00000640306 GPHNQ9NQX3 736 aaPredicted RBP19.46■□□□□ 0.71
HNRNPU-228ENST00000640306 CTDNEP1O95476 244 aa19.45■□□□□ 0.7
HNRNPU-228ENST00000640306 SNRPA1P09661 255 aaKnown RBP19.45■□□□□ 0.7
HNRNPU-228ENST00000640306 NAA30Q147X3 362 aaPredicted RBP19.45■□□□□ 0.7
HNRNPU-228ENST00000640306 TTLL5Q6EMB2 1281 aa19.45■□□□□ 0.7
HNRNPU-228ENST00000640306 OTUD7BQ6GQQ9 843 aa19.45■□□□□ 0.7
HNRNPU-228ENST00000640306 NSUN7Q8NE18 718 aaKnown RBP19.45■□□□□ 0.7
HNRNPU-228ENST00000640306 GOLGA6L19H0YKK7 550 aa19.45■□□□□ 0.7
HNRNPU-228ENST00000640306 PLA2G4DQ86XP0 818 aa19.45■□□□□ 0.7
HNRNPU-228ENST00000640306 TDRD7Q8NHU6 1098 aaKnown RBP19.45■□□□□ 0.7
HNRNPU-228ENST00000640306 JCADQ9P266 1359 aa19.45■□□□□ 0.7
HNRNPU-228ENST00000640306 LRP10Q7Z4F1 713 aa19.45■□□□□ 0.7
HNRNPU-228ENST00000640306 CFAP45Q9UL16 551 aa19.45■□□□□ 0.7
HNRNPU-228ENST00000640306 RBM43Q6ZSC3 357 aaKnown RBP19.44■□□□□ 0.7
HNRNPU-228ENST00000640306 FILIP1Q7Z7B0 1213 aa19.44■□□□□ 0.7
HNRNPU-228ENST00000640306 KBTBD3Q8NAB2 608 aa19.44■□□□□ 0.7
HNRNPU-228ENST00000640306 CCDC85AQ96PX6 553 aaPredicted RBP19.44■□□□□ 0.7
HNRNPU-228ENST00000640306 DCCP43146 1447 aa19.44■□□□□ 0.7
HNRNPU-228ENST00000640306 PDIA4P13667 645 aaKnown RBP19.44■□□□□ 0.7
HNRNPU-228ENST00000640306 HSP90AB3PQ58FF7 597 aa19.44■□□□□ 0.7
HNRNPU-228ENST00000640306 PDCL2Q8N4E4 241 aa19.44■□□□□ 0.7
HNRNPU-228ENST00000640306 CYP27B1O15528 508 aa19.43■□□□□ 0.7
HNRNPU-228ENST00000640306 TNNT1P13805 278 aa19.43■□□□□ 0.7
HNRNPU-228ENST00000640306 ME1P48163 572 aa19.43■□□□□ 0.7
HNRNPU-228ENST00000640306 HAND2P61296 217 aa19.43■□□□□ 0.7
HNRNPU-228ENST00000640306 DHX32Q7L7V1 743 aaKnown RBP19.43■□□□□ 0.7
HNRNPU-228ENST00000640306 PAG1Q9NWQ8 432 aa19.43■□□□□ 0.7
HNRNPU-228ENST00000640306 TRPM3Q9HCF6 1732 aaPredicted RBP19.43■□□□□ 0.7
HNRNPU-228ENST00000640306 U2AF2P26368 475 aaKnown RBP eCLIP19.43■□□□□ 0.75e-11■■■■■ 29.8
HNRNPU-228ENST00000640306 ADD1P35611 737 aaKnown RBP19.43■□□□□ 0.7
HNRNPU-228ENST00000640306 TPD52L1Q16890 204 aaPredicted RBP19.43■□□□□ 0.7
HNRNPU-228ENST00000640306 LRRC24Q50LG9 513 aa19.43■□□□□ 0.7
HNRNPU-228ENST00000640306 SLAIN2Q9P270 581 aa19.43■□□□□ 0.7
HNRNPU-228ENST00000640306 XIRP1Q702N8 1843 aaKnown RBP19.43■□□□□ 0.7
HNRNPU-228ENST00000640306 TTLL7Q6ZT98 887 aa19.42■□□□□ 0.7
HNRNPU-228ENST00000640306 IFNL2Q8IZJ0 200 aa19.42■□□□□ 0.7
HNRNPU-228ENST00000640306 ZSCAN16Q9H4T2 348 aaPredicted RBP19.42■□□□□ 0.7
HNRNPU-228ENST00000640306 BECN2A8MW95 431 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms