RNA–Protein interactions for RNA: ENST00000637806.1

SMARCA2-263, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5 BASIC

Gene SMARCA2, Length 7,061 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-263ENST00000637806 CT47A1Q5JQC4 288 aaPredicted RBP11.18□□□□□ -0.62
SMARCA2-263ENST00000637806 KSR2Q6VAB6 950 aa11.18□□□□□ -0.62
SMARCA2-263ENST00000637806 MAGEB6P1A0A0J9YX57 407 aa11.17□□□□□ -0.62
SMARCA2-263ENST00000637806 M0QZ92 97 aa11.17□□□□□ -0.62
SMARCA2-263ENST00000637806 ZBED4O75132 1171 aa11.17□□□□□ -0.62
SMARCA2-263ENST00000637806 GRM8O00222 908 aa11.17□□□□□ -0.62
SMARCA2-263ENST00000637806 MICAL1Q8TDZ2 1067 aa11.17□□□□□ -0.62
SMARCA2-263ENST00000637806 ZMYND15Q9H091 742 aa11.17□□□□□ -0.62
SMARCA2-263ENST00000637806 KCNH4Q9UQ05 1017 aa11.17□□□□□ -0.62
SMARCA2-263ENST00000637806 ILDR2Q71H61 639 aa11.17□□□□□ -0.62
SMARCA2-263ENST00000637806 FTOQ9C0B1 505 aaKnown RBP eCLIP11.17□□□□□ -0.62
SMARCA2-263ENST00000637806 DENND2AQ9ULE3 1009 aa11.17□□□□□ -0.62
SMARCA2-263ENST00000637806 USP17L3A6NCW0 530 aa11.17□□□□□ -0.62
SMARCA2-263ENST00000637806 USP17L4A6NCW7 530 aa11.17□□□□□ -0.62
SMARCA2-263ENST00000637806 ADRA2BP18089 450 aa11.17□□□□□ -0.62
SMARCA2-263ENST00000637806 USP17L1Q7RTZ2 530 aa11.17□□□□□ -0.62
SMARCA2-263ENST00000637806 PLBD2Q8NHP8 589 aa11.17□□□□□ -0.62
SMARCA2-263ENST00000637806 PRPF40BQ6NWY9 871 aaKnown RBP11.17□□□□□ -0.62
SMARCA2-263ENST00000637806 MIGA2Q7L4E1 593 aa11.17□□□□□ -0.62
SMARCA2-263ENST00000637806 SLC4A4Q9Y6R1 1079 aa11.17□□□□□ -0.62
SMARCA2-263ENST00000637806 TAF1CQ15572 869 aaPredicted RBP11.16□□□□□ -0.62
SMARCA2-263ENST00000637806 CRB1P82279 1406 aa11.16□□□□□ -0.62
SMARCA2-263ENST00000637806 IQSEC2Q5JU85 1478 aa11.16□□□□□ -0.62
SMARCA2-263ENST00000637806 ERBB3P21860 1342 aa11.16□□□□□ -0.62
SMARCA2-263ENST00000637806 TBC1D22AQ8WUA7 517 aa11.16□□□□□ -0.62
SMARCA2-263ENST00000637806 TRIM75PA6NK02 468 aa11.16□□□□□ -0.62
SMARCA2-263ENST00000637806 CCER2I3L3R5 266 aa11.16□□□□□ -0.62
SMARCA2-263ENST00000637806 PTMSP20962 102 aa11.16□□□□□ -0.62
SMARCA2-263ENST00000637806 SREBF2Q12772 1141 aa11.16□□□□□ -0.62
SMARCA2-263ENST00000637806 CEP170BQ9Y4F5 1589 aaPredicted RBP11.16□□□□□ -0.62
SMARCA2-263ENST00000637806 REC8O95072 547 aa11.16□□□□□ -0.62
SMARCA2-263ENST00000637806 EDC4Q6P2E9 1401 aaKnown RBP11.16□□□□□ -0.62
SMARCA2-263ENST00000637806 CPS1P31327 1500 aa11.16□□□□□ -0.62
SMARCA2-263ENST00000637806 EPHX2P34913 555 aa11.16□□□□□ -0.62
SMARCA2-263ENST00000637806 IARSP41252 1262 aaKnown RBP11.16□□□□□ -0.62
SMARCA2-263ENST00000637806 RASSF7Q02833 373 aa11.15□□□□□ -0.62
SMARCA2-263ENST00000637806 PPP4R3BQ5MIZ7 849 aa11.15□□□□□ -0.62
SMARCA2-263ENST00000637806 CNOT7Q9UIV1 285 aaKnown RBP11.15□□□□□ -0.62
SMARCA2-263ENST00000637806 ZBTB24O43167 697 aaPredicted RBP11.15□□□□□ -0.62
SMARCA2-263ENST00000637806 LRSAM1Q6UWE0 723 aa11.15□□□□□ -0.62
SMARCA2-263ENST00000637806 PDCL3Q9H2J4 239 aa11.15□□□□□ -0.62
SMARCA2-263ENST00000637806 NSMFQ6X4W1 530 aa11.15□□□□□ -0.62
SMARCA2-263ENST00000637806 BACH1O14867 736 aa11.15□□□□□ -0.62
SMARCA2-263ENST00000637806 MAGEB6Q8N7X4 407 aa11.15□□□□□ -0.62
SMARCA2-263ENST00000637806 OTUD5Q96G74 571 aa11.15□□□□□ -0.62
SMARCA2-263ENST00000637806 AP5M1Q9H0R1 490 aa11.15□□□□□ -0.62
SMARCA2-263ENST00000637806 IL6STP40189 918 aaPredicted RBP11.15□□□□□ -0.63
SMARCA2-263ENST00000637806 CWC27Q6UX04 472 aaKnown RBP11.15□□□□□ -0.63
SMARCA2-263ENST00000637806 MARCH10Q8NA82 808 aaPredicted RBP11.15□□□□□ -0.63
SMARCA2-263ENST00000637806 UIMC1Q96RL1 719 aa11.15□□□□□ -0.63
SMARCA2-263ENST00000637806 PSMA5P28066 241 aa11.14□□□□□ -0.63
SMARCA2-263ENST00000637806 RNF169Q8NCN4 708 aa11.14□□□□□ -0.63
SMARCA2-263ENST00000637806 C1orf167Q5SNV9 1468 aa11.14□□□□□ -0.63
SMARCA2-263ENST00000637806 NSD2O96028 1365 aa11.14□□□□□ -0.63
SMARCA2-263ENST00000637806 DEFB115Q30KQ5 88 aa11.14□□□□□ -0.63
SMARCA2-263ENST00000637806 RNF41Q9H4P4 317 aaPredicted RBP11.14□□□□□ -0.63
SMARCA2-263ENST00000637806 SYT17Q9BSW7 474 aa11.14□□□□□ -0.63
SMARCA2-263ENST00000637806 DNAI2Q9GZS0 605 aa11.14□□□□□ -0.63
SMARCA2-263ENST00000637806 PNMA3Q9UL41 463 aa11.14□□□□□ -0.63
SMARCA2-263ENST00000637806 USP16Q9Y5T5 823 aa11.14□□□□□ -0.63
SMARCA2-263ENST00000637806 MAP1SQ66K74 1059 aaPredicted RBP11.14□□□□□ -0.63
SMARCA2-263ENST00000637806 BARGINQ6ZT62 677 aa11.14□□□□□ -0.63
SMARCA2-263ENST00000637806 TSKSQ9UJT2 592 aa11.14□□□□□ -0.63
SMARCA2-263ENST00000637806 ANKARQ7Z5J8 1434 aa11.14□□□□□ -0.63
SMARCA2-263ENST00000637806 ZNF213O14771 459 aa11.14□□□□□ -0.63
SMARCA2-263ENST00000637806 KIF4BQ2VIQ3 1234 aa11.14□□□□□ -0.63
SMARCA2-263ENST00000637806 KIF1BPQ96EK5 621 aa11.14□□□□□ -0.63
SMARCA2-263ENST00000637806 ZBTB21Q9ULJ3 1066 aa11.14□□□□□ -0.63
SMARCA2-263ENST00000637806 TXLNAP40222 546 aa11.14□□□□□ -0.63
SMARCA2-263ENST00000637806 TTLL7Q6ZT98 887 aa11.14□□□□□ -0.63
SMARCA2-263ENST00000637806 SMARCC2Q8TAQ2 1214 aa11.14□□□□□ -0.63
SMARCA2-263ENST00000637806 GPR101Q96P66 508 aaPredicted RBP11.14□□□□□ -0.63
SMARCA2-263ENST00000637806 HINFPQ9BQA5 517 aa11.14□□□□□ -0.63
SMARCA2-263ENST00000637806 MBIPQ9NS73 344 aa11.14□□□□□ -0.63
SMARCA2-263ENST00000637806 DDX21Q9NR30 783 aaKnown RBP eCLIP11.13□□□□□ -0.63
SMARCA2-263ENST00000637806 STK3Q13188 491 aa11.13□□□□□ -0.63
SMARCA2-263ENST00000637806 ANKRD35Q8N283 1001 aa11.13□□□□□ -0.63
SMARCA2-263ENST00000637806 ZFYVE28Q9HCC9 887 aa11.13□□□□□ -0.63
SMARCA2-263ENST00000637806 PKD2L1Q9P0L9 805 aa11.13□□□□□ -0.63
SMARCA2-263ENST00000637806 COL23A1Q86Y22 540 aaPredicted RBP11.13□□□□□ -0.63
SMARCA2-263ENST00000637806 ZNF594Q96JF6 807 aaPredicted RBP11.13□□□□□ -0.63
SMARCA2-263ENST00000637806 AATFQ9NY61 560 aaKnown RBP eCLIP11.13□□□□□ -0.63
SMARCA2-263ENST00000637806 CNPY2Q9Y2B0 182 aa11.13□□□□□ -0.63
SMARCA2-263ENST00000637806 TRPA1O75762 1119 aa11.13□□□□□ -0.63
SMARCA2-263ENST00000637806 NLRP5P59047 1200 aa11.13□□□□□ -0.63
SMARCA2-263ENST00000637806 TPM4P67936 248 aa11.13□□□□□ -0.63
SMARCA2-263ENST00000637806 WDR63Q8IWG1 891 aa11.13□□□□□ -0.63
SMARCA2-263ENST00000637806 CCDC191Q8NCU4 936 aa11.13□□□□□ -0.63
SMARCA2-263ENST00000637806 RNF123Q5XPI4 1314 aa11.13□□□□□ -0.63
SMARCA2-263ENST00000637806 Q3C1V9 767 aa11.13□□□□□ -0.63
SMARCA2-263ENST00000637806 CATIPQ7Z7H3 387 aa11.13□□□□□ -0.63
SMARCA2-263ENST00000637806 MICALL2Q8IY33 904 aa11.13□□□□□ -0.63
SMARCA2-263ENST00000637806 KIFC2Q96AC6 838 aa11.13□□□□□ -0.63
SMARCA2-263ENST00000637806 TNPO2O14787 897 aaKnown RBP11.12□□□□□ -0.63
SMARCA2-263ENST00000637806 MYCLP12524 364 aaPredicted RBP11.12□□□□□ -0.63
SMARCA2-263ENST00000637806 NOP2P46087 812 aaKnown RBP11.12□□□□□ -0.63
SMARCA2-263ENST00000637806 GOPCQ9HD26 462 aa11.12□□□□□ -0.63
SMARCA2-263ENST00000637806 SASH1O94885 1247 aa11.12□□□□□ -0.63
SMARCA2-263ENST00000637806 ZEB2O60315 1214 aa11.12□□□□□ -0.63
SMARCA2-263ENST00000637806 TBC1D9BQ66K14 1250 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms