RNA–Protein interactions for RNA: ENST00000625293.1

TREX1-205, Transcript of three prime repair exonuclease 1, humanhuman

BASIC

Gene TREX1, Length 1,783 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-205ENST00000625293 CEP126Q9P2H0 1117 aa23.7■■□□□ 1.39
TREX1-205ENST00000625293 PDE8AO60658 829 aa23.7■■□□□ 1.38
TREX1-205ENST00000625293 CUL4AQ13619 759 aa23.7■■□□□ 1.38
TREX1-205ENST00000625293 NECTIN1Q15223 517 aa23.7■■□□□ 1.38
TREX1-205ENST00000625293 LINC00116Q8NCU8 138 aa23.7■■□□□ 1.38
TREX1-205ENST00000625293 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.7■■□□□ 1.38
TREX1-205ENST00000625293 NEUROD6Q96NK8 337 aa23.7■■□□□ 1.38
TREX1-205ENST00000625293 CCDC85AQ96PX6 553 aaPredicted RBP23.7■■□□□ 1.38
TREX1-205ENST00000625293 UPF3BQ9BZI7 483 aaKnown RBP23.7■■□□□ 1.38
TREX1-205ENST00000625293 GREM2Q9H772 168 aa23.7■■□□□ 1.38
TREX1-205ENST00000625293 AMIGO3Q86WK7 504 aa23.69■■□□□ 1.38
TREX1-205ENST00000625293 TICAM2Q86XR7 235 aa23.69■■□□□ 1.38
TREX1-205ENST00000625293 AK7Q96M32 723 aa23.69■■□□□ 1.38
TREX1-205ENST00000625293 CWC22Q9HCG8 908 aaKnown RBP23.69■■□□□ 1.38
TREX1-205ENST00000625293 NDUFB9Q9Y6M9 179 aa23.69■■□□□ 1.38
TREX1-205ENST00000625293 LRP5O75197 1615 aa23.69■■□□□ 1.38
TREX1-205ENST00000625293 ITGA6P23229 1130 aa23.68■■□□□ 1.38
TREX1-205ENST00000625293 TTC14Q96N46 770 aa23.68■■□□□ 1.38
TREX1-205ENST00000625293 RIPOR2Q9Y4F9 1068 aa23.68■■□□□ 1.38
TREX1-205ENST00000625293 KBTBD3Q8NAB2 608 aa23.68■■□□□ 1.38
TREX1-205ENST00000625293 DNAJC2Q99543 621 aaKnown RBP23.68■■□□□ 1.38
TREX1-205ENST00000625293 AKAP2Q9Y2D5 859 aa23.68■■□□□ 1.38
TREX1-205ENST00000625293 CYP2E1P05181 493 aaPredicted RBP23.67■■□□□ 1.38
TREX1-205ENST00000625293 TAF7LQ5H9L4 462 aa23.67■■□□□ 1.38
TREX1-205ENST00000625293 SUSD4Q5VX71 490 aa23.67■■□□□ 1.38
TREX1-205ENST00000625293 ZNF589Q86UQ0 364 aaPredicted RBP23.67■■□□□ 1.38
TREX1-205ENST00000625293 ZGPATQ8N5A5 531 aaKnown RBP23.67■■□□□ 1.38
TREX1-205ENST00000625293 TFCP2L1Q9NZI6 479 aa23.67■■□□□ 1.38
TREX1-205ENST00000625293 RBM8AQ9Y5S9 174 aaKnown RBP23.67■■□□□ 1.38
TREX1-205ENST00000625293 MYH3P11055 1940 aa23.66■■□□□ 1.38
TREX1-205ENST00000625293 TM6SF1Q9BZW5 370 aa23.66■■□□□ 1.38
TREX1-205ENST00000625293 ANKRD18BA2A2Z9 1011 aa23.65■■□□□ 1.38
TREX1-205ENST00000625293 PARP10Q53GL7 1025 aa23.65■■□□□ 1.38
TREX1-205ENST00000625293 PRPF40BQ6NWY9 871 aaKnown RBP23.65■■□□□ 1.38
TREX1-205ENST00000625293 CLEC17AQ6ZS10 378 aa23.65■■□□□ 1.38
TREX1-205ENST00000625293 DDX46Q7L014 1031 aaKnown RBP23.65■■□□□ 1.38
TREX1-205ENST00000625293 BCORQ6W2J9 1755 aa23.65■■□□□ 1.38
TREX1-205ENST00000625293 PAG1Q9NWQ8 432 aa23.65■■□□□ 1.38
TREX1-205ENST00000625293 SPEF2Q9C093 1822 aa23.65■■□□□ 1.38
TREX1-205ENST00000625293 ZBTB7AO95365 584 aa23.64■■□□□ 1.37
TREX1-205ENST00000625293 CREB3L3Q68CJ9 461 aa23.64■■□□□ 1.37
TREX1-205ENST00000625293 INTS4Q96HW7 963 aaKnown RBP23.64■■□□□ 1.37
TREX1-205ENST00000625293 SH3TC1Q8TE82 1336 aa23.64■■□□□ 1.37
TREX1-205ENST00000625293 TAF5LO75529 589 aa23.63■■□□□ 1.37
TREX1-205ENST00000625293 SSFA2P28290 1259 aa23.63■■□□□ 1.37
TREX1-205ENST00000625293 ADORA1P30542 326 aa23.63■■□□□ 1.37
TREX1-205ENST00000625293 NUCB2P80303 420 aa23.63■■□□□ 1.37
TREX1-205ENST00000625293 VGLL2Q8N8G2 317 aa23.63■■□□□ 1.37
TREX1-205ENST00000625293 XAGE2Q96GT9 111 aa23.63■■□□□ 1.37
TREX1-205ENST00000625293 UTP14AQ9BVJ6 771 aaKnown RBP23.63■■□□□ 1.37
TREX1-205ENST00000625293 PNPLA7Q6ZV29 1317 aa23.63■■□□□ 1.37
TREX1-205ENST00000625293 CNTNAP4Q9C0A0 1308 aa23.63■■□□□ 1.37
TREX1-205ENST00000625293 TAF1LQ8IZX4 1826 aa23.63■■□□□ 1.37
TREX1-205ENST00000625293 ABCC12Q96J65 1359 aa23.63■■□□□ 1.37
TREX1-205ENST00000625293 IFIT1P09914 478 aaKnown RBP23.63■■□□□ 1.37
TREX1-205ENST00000625293 LDHAL6AQ6ZMR3 332 aa23.63■■□□□ 1.37
TREX1-205ENST00000625293 ZSWIM6Q9HCJ5 1215 aa23.63■■□□□ 1.37
TREX1-205ENST00000625293 RPAP1Q9BWH6 1393 aaPredicted RBP23.62■■□□□ 1.37
TREX1-205ENST00000625293 GOLIM4O00461 696 aa23.62■■□□□ 1.37
TREX1-205ENST00000625293 SLC27A2O14975 620 aa23.62■■□□□ 1.37
TREX1-205ENST00000625293 NTSR2O95665 410 aa23.62■■□□□ 1.37
TREX1-205ENST00000625293 CHGBP05060 677 aa23.62■■□□□ 1.37
TREX1-205ENST00000625293 GSE1Q14687 1217 aa23.62■■□□□ 1.37
TREX1-205ENST00000625293 ADCK5Q3MIX3 580 aa23.62■■□□□ 1.37
TREX1-205ENST00000625293 USPL1Q5W0Q7 1092 aa23.62■■□□□ 1.37
TREX1-205ENST00000625293 ATF5Q9Y2D1 282 aaPredicted RBP23.62■■□□□ 1.37
TREX1-205ENST00000625293 DDX11L8A8MPP1 907 aa23.61■■□□□ 1.37
TREX1-205ENST00000625293 RGL2O15211 777 aa23.6■■□□□ 1.37
TREX1-205ENST00000625293 MCMDC2Q4G0Z9 681 aa23.6■■□□□ 1.37
TREX1-205ENST00000625293 METTL24Q5JXM2 366 aa23.6■■□□□ 1.37
TREX1-205ENST00000625293 COL23A1Q86Y22 540 aaPredicted RBP23.6■■□□□ 1.37
TREX1-205ENST00000625293 GBP4Q96PP9 640 aa23.6■■□□□ 1.37
TREX1-205ENST00000625293 PHF14O94880 888 aa23.6■■□□□ 1.37
TREX1-205ENST00000625293 ZKSCAN1P17029 563 aaPredicted RBP23.6■■□□□ 1.37
TREX1-205ENST00000625293 CASTP20810 708 aaKnown RBP23.6■■□□□ 1.37
TREX1-205ENST00000625293 ATP2B3Q16720 1220 aa23.6■■□□□ 1.37
TREX1-205ENST00000625293 CCDC158Q5M9N0 1113 aa23.6■■□□□ 1.37
TREX1-205ENST00000625293 CLEC4GQ6UXB4 293 aa23.6■■□□□ 1.37
TREX1-205ENST00000625293 NIP7Q9Y221 180 aaKnown RBP eCLIP23.6■■□□□ 1.37
TREX1-205ENST00000625293 LAMB2P55268 1798 aa23.6■■□□□ 1.37
TREX1-205ENST00000625293 DDX60Q8IY21 1712 aaKnown RBP23.59■■□□□ 1.37
TREX1-205ENST00000625293 RTL9Q8NET4 1388 aa23.59■■□□□ 1.37
TREX1-205ENST00000625293 HCLS1P14317 486 aaPredicted RBP23.59■■□□□ 1.37
TREX1-205ENST00000625293 AK2P54819 239 aa23.59■■□□□ 1.37
TREX1-205ENST00000625293 TSGA10IPQ3SY00 556 aa23.59■■□□□ 1.37
TREX1-205ENST00000625293 JAKMIP1Q96N16 626 aaKnown RBP23.59■■□□□ 1.37
TREX1-205ENST00000625293 HELLSQ9NRZ9 838 aa23.59■■□□□ 1.37
TREX1-205ENST00000625293 C4BP0C0L5 1744 aa23.59■■□□□ 1.37
TREX1-205ENST00000625293 ZMYM1Q5SVZ6 1142 aa23.58■■□□□ 1.37
TREX1-205ENST00000625293 VPS53Q5VIR6 699 aa23.58■■□□□ 1.37
TREX1-205ENST00000625293 SEC62Q99442 399 aaKnown RBP23.58■■□□□ 1.37
TREX1-205ENST00000625293 CNNM1Q9NRU3 951 aa23.58■■□□□ 1.37
TREX1-205ENST00000625293 ZNF652Q9Y2D9 606 aa23.58■■□□□ 1.37
TREX1-205ENST00000625293 KCNJ4P48050 445 aa23.57■■□□□ 1.36
TREX1-205ENST00000625293 PKP1Q13835 747 aa23.57■■□□□ 1.36
TREX1-205ENST00000625293 TTC39AQ5SRH9 613 aa23.57■■□□□ 1.36
TREX1-205ENST00000625293 RC3H1Q5TC82 1133 aaKnown RBP23.57■■□□□ 1.36
TREX1-205ENST00000625293 NOL8Q76FK4 1167 aaKnown RBP23.57■■□□□ 1.36
TREX1-205ENST00000625293 RUFY3Q7L099 469 aa23.57■■□□□ 1.36
TREX1-205ENST00000625293 HMG20BQ9P0W2 317 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms