RNA–Protein interactions for RNA: ENST00000625222.1

LINC01230-201, Transcript of long intergenic non-protein coding RNA 1230, humanhuman

BASIC

Gene LINC01230, Length 3,017 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01230-201ENST00000625222 ARID5BQ14865 1188 aa17.5■□□□□ 0.39
LINC01230-201ENST00000625222 OTUD7BQ6GQQ9 843 aa17.5■□□□□ 0.39
LINC01230-201ENST00000625222 HAND2P61296 217 aa17.49■□□□□ 0.39
LINC01230-201ENST00000625222 DDX19AQ9NUU7 478 aaKnown RBP17.49■□□□□ 0.39
LINC01230-201ENST00000625222 HMG20BQ9P0W2 317 aa17.49■□□□□ 0.39
LINC01230-201ENST00000625222 CLIP2Q9UDT6 1046 aa17.49■□□□□ 0.39
LINC01230-201ENST00000625222 ZNF609O15014 1411 aa17.49■□□□□ 0.39
LINC01230-201ENST00000625222 NFAT5O94916 1531 aa17.49■□□□□ 0.39
LINC01230-201ENST00000625222 GOLGA6L19H0YKK7 550 aa17.49■□□□□ 0.39
LINC01230-201ENST00000625222 MCMDC2Q4G0Z9 681 aa17.49■□□□□ 0.39
LINC01230-201ENST00000625222 SPTLC3Q9NUV7 552 aa17.49■□□□□ 0.39
LINC01230-201ENST00000625222 RESTQ13127 1097 aa17.48■□□□□ 0.39
LINC01230-201ENST00000625222 FILIP1Q7Z7B0 1213 aa17.48■□□□□ 0.39
LINC01230-201ENST00000625222 GPHNQ9NQX3 736 aaPredicted RBP17.48■□□□□ 0.39
LINC01230-201ENST00000625222 ATP5JP18859 108 aa17.48■□□□□ 0.39
LINC01230-201ENST00000625222 TTLL5Q6EMB2 1281 aa17.48■□□□□ 0.39
LINC01230-201ENST00000625222 C11orf57Q6ZUT1 292 aaPredicted RBP17.48■□□□□ 0.39
LINC01230-201ENST00000625222 CCAR1Q8IX12 1150 aaKnown RBP17.48■□□□□ 0.39
LINC01230-201ENST00000625222 ZBTB3Q9H5J0 574 aa17.48■□□□□ 0.39
LINC01230-201ENST00000625222 ME1P48163 572 aa17.47■□□□□ 0.39
LINC01230-201ENST00000625222 ZNF75DP51815 510 aa17.47■□□□□ 0.39
LINC01230-201ENST00000625222 KRT32Q14532 448 aa17.47■□□□□ 0.39
LINC01230-201ENST00000625222 PROSER2Q86WR7 435 aaPredicted RBP17.47■□□□□ 0.39
LINC01230-201ENST00000625222 U3KPZ7 1027 aaPredicted RBP17.47■□□□□ 0.39
LINC01230-201ENST00000625222 PTPDC1A2A3K4 754 aa17.47■□□□□ 0.39
LINC01230-201ENST00000625222 NAA30Q147X3 362 aaPredicted RBP17.47■□□□□ 0.39
LINC01230-201ENST00000625222 KDM3BQ7LBC6 1761 aa17.47■□□□□ 0.39
LINC01230-201ENST00000625222 FKBP4Q02790 459 aaKnown RBP eCLIP17.47■□□□□ 0.39
LINC01230-201ENST00000625222 TPD52L1Q16890 204 aaPredicted RBP17.47■□□□□ 0.39
LINC01230-201ENST00000625222 ELP1O95163 1332 aa17.46■□□□□ 0.39
LINC01230-201ENST00000625222 MED1Q15648 1581 aaPredicted RBP17.46■□□□□ 0.39
LINC01230-201ENST00000625222 BECN2A8MW95 431 aa17.46■□□□□ 0.39
LINC01230-201ENST00000625222 CCDC144BQ3MJ40 725 aa17.46■□□□□ 0.39
LINC01230-201ENST00000625222 CCDC144CPQ8IYA2 1237 aa17.46■□□□□ 0.39
LINC01230-201ENST00000625222 ZHX1Q9UKY1 873 aaPredicted RBP17.46■□□□□ 0.39
LINC01230-201ENST00000625222 PHKG2P15735 406 aa17.46■□□□□ 0.39
LINC01230-201ENST00000625222 RFX5P48382 616 aaPredicted RBP17.46■□□□□ 0.39
LINC01230-201ENST00000625222 CABP4P57796 275 aa17.46■□□□□ 0.39
LINC01230-201ENST00000625222 UTYO14607 1347 aa17.46■□□□□ 0.39
LINC01230-201ENST00000625222 ERBB3P21860 1342 aa17.46■□□□□ 0.39
LINC01230-201ENST00000625222 IGSF3O75054 1194 aa17.45■□□□□ 0.38
LINC01230-201ENST00000625222 SNRPA1P09661 255 aaKnown RBP17.45■□□□□ 0.38
LINC01230-201ENST00000625222 MTERF4Q7Z6M4 381 aaKnown RBP17.45■□□□□ 0.38
LINC01230-201ENST00000625222 USP28Q96RU2 1077 aa17.45■□□□□ 0.38
LINC01230-201ENST00000625222 CCDC94Q9BW85 323 aaPredicted RBP17.45■□□□□ 0.38
LINC01230-201ENST00000625222 COPRSQ9NQ92 184 aa17.45■□□□□ 0.38
LINC01230-201ENST00000625222 N4BP2Q86UW6 1770 aaPredicted RBP17.45■□□□□ 0.38
LINC01230-201ENST00000625222 CACTINQ8WUQ7 758 aaKnown RBP17.45■□□□□ 0.38
LINC01230-201ENST00000625222 FMNL2Q96PY5 1086 aa17.45■□□□□ 0.38
LINC01230-201ENST00000625222 GOLPH3LQ9H4A5 285 aa17.45■□□□□ 0.38
LINC01230-201ENST00000625222 TRMT1Q9NXH9 659 aaKnown RBP17.45■□□□□ 0.38
LINC01230-201ENST00000625222 TNNT1P13805 278 aa17.45■□□□□ 0.38
LINC01230-201ENST00000625222 LRRC24Q50LG9 513 aa17.45■□□□□ 0.38
LINC01230-201ENST00000625222 ZSCAN25Q6NSZ9 544 aa17.45■□□□□ 0.38
LINC01230-201ENST00000625222 CCDC73Q6ZRK6 1079 aa17.45■□□□□ 0.38
LINC01230-201ENST00000625222 TTLL7Q6ZT98 887 aa17.45■□□□□ 0.38
LINC01230-201ENST00000625222 PDCL2Q8N4E4 241 aa17.45■□□□□ 0.38
LINC01230-201ENST00000625222 U2AF2P26368 475 aaKnown RBP eCLIP17.44■□□□□ 0.38
LINC01230-201ENST00000625222 ATP2B3Q16720 1220 aa17.44■□□□□ 0.38
LINC01230-201ENST00000625222 WASHC4Q2M389 1173 aa17.44■□□□□ 0.38
LINC01230-201ENST00000625222 HEG1Q9ULI3 1381 aa17.44■□□□□ 0.38
LINC01230-201ENST00000625222 POLR3DP05423 398 aaPredicted RBP17.44■□□□□ 0.38
LINC01230-201ENST00000625222 TPM3P06753 285 aa17.44■□□□□ 0.38
LINC01230-201ENST00000625222 FSIP1Q8NA03 581 aa17.44■□□□□ 0.38
LINC01230-201ENST00000625222 GJB4Q9NTQ9 266 aa17.44■□□□□ 0.38
LINC01230-201ENST00000625222 PAG1Q9NWQ8 432 aa17.44■□□□□ 0.38
LINC01230-201ENST00000625222 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.44■□□□□ 0.38
LINC01230-201ENST00000625222 V9GYY5 206 aaPredicted RBP17.44■□□□□ 0.38
LINC01230-201ENST00000625222 GORABQ5T7V8 394 aa17.43■□□□□ 0.38
LINC01230-201ENST00000625222 NSUN7Q8NE18 718 aaKnown RBP17.43■□□□□ 0.38
LINC01230-201ENST00000625222 CFAP45Q9UL16 551 aa17.43■□□□□ 0.38
LINC01230-201ENST00000625222 BIN1O00499 593 aa17.43■□□□□ 0.38
LINC01230-201ENST00000625222 ISM2Q6H9L7 571 aa17.43■□□□□ 0.38
LINC01230-201ENST00000625222 IFNL2Q8IZJ0 200 aa17.43■□□□□ 0.38
LINC01230-201ENST00000625222 HAUS7Q99871 368 aa17.43■□□□□ 0.38
LINC01230-201ENST00000625222 KINO60870 393 aaKnown RBP17.42■□□□□ 0.38
LINC01230-201ENST00000625222 KBTBD3Q8NAB2 608 aa17.42■□□□□ 0.38
LINC01230-201ENST00000625222 PUS3Q9BZE2 481 aaKnown RBP17.42■□□□□ 0.38
LINC01230-201ENST00000625222 CTDNEP1O95476 244 aa17.42■□□□□ 0.38
LINC01230-201ENST00000625222 A1BGP04217 495 aa17.42■□□□□ 0.38
LINC01230-201ENST00000625222 IFIT1P09914 478 aaKnown RBP17.42■□□□□ 0.38
LINC01230-201ENST00000625222 DHX32Q7L7V1 743 aaKnown RBP17.42■□□□□ 0.38
LINC01230-201ENST00000625222 SYTL4Q96C24 671 aaPredicted RBP17.42■□□□□ 0.38
LINC01230-201ENST00000625222 CYP27B1O15528 508 aa17.42■□□□□ 0.38
LINC01230-201ENST00000625222 SF3A1Q15459 793 aaKnown RBP17.42■□□□□ 0.38
LINC01230-201ENST00000625222 KDM6AO15550 1401 aaPredicted RBP17.42■□□□□ 0.38
LINC01230-201ENST00000625222 A0A1B0GVL5 298 aa17.41■□□□□ 0.38
LINC01230-201ENST00000625222 NPHP1O15259 732 aa17.41■□□□□ 0.38
LINC01230-201ENST00000625222 USPL1Q5W0Q7 1092 aa17.41■□□□□ 0.38
LINC01230-201ENST00000625222 SDF4Q9BRK5 362 aa17.41■□□□□ 0.38
LINC01230-201ENST00000625222 CRYBG1Q9Y4K1 1723 aa17.41■□□□□ 0.38
LINC01230-201ENST00000625222 NCAPD2Q15021 1401 aa17.41■□□□□ 0.38
LINC01230-201ENST00000625222 AOPEPQ8N6M6 819 aa17.41■□□□□ 0.38
LINC01230-201ENST00000625222 USP27XA6NNY8 438 aa17.4■□□□□ 0.38
LINC01230-201ENST00000625222 E7EWF7 191 aa17.4■□□□□ 0.38
LINC01230-201ENST00000625222 TDRD7Q8NHU6 1098 aaKnown RBP17.4■□□□□ 0.38
LINC01230-201ENST00000625222 PLA2G4DQ86XP0 818 aa17.39■□□□□ 0.38
LINC01230-201ENST00000625222 ZSCAN16Q9H4T2 348 aaPredicted RBP17.39■□□□□ 0.38
LINC01230-201ENST00000625222 ADGRL3Q9HAR2 1447 aa17.39■□□□□ 0.37
LINC01230-201ENST00000625222 PFKFB2O60825 505 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms