RNA–Protein interactions for RNA: ENST00000584424.1

TTC39C-210, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2

Gene TTC39C, Length 739 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-210ENST00000584424 USP17L18D6R9N7 530 aa7.83□□□□□ -1.16
TTC39C-210ENST00000584424 USP17L22D6RA61 530 aa7.83□□□□□ -1.16
TTC39C-210ENST00000584424 USP17L17D6RBQ6 530 aa7.83□□□□□ -1.16
TTC39C-210ENST00000584424 USP17L19D6RCP7 530 aa7.83□□□□□ -1.16
TTC39C-210ENST00000584424 USP17L20D6RJB6 530 aa7.83□□□□□ -1.16
TTC39C-210ENST00000584424 EGFRP00533 1210 aa7.83□□□□□ -1.16
TTC39C-210ENST00000584424 CDC25BP30305 580 aa7.83□□□□□ -1.16
TTC39C-210ENST00000584424 USP17L24Q0WX57 530 aa7.83□□□□□ -1.16
TTC39C-210ENST00000584424 TXNDC11Q6PKC3 985 aa7.83□□□□□ -1.16
TTC39C-210ENST00000584424 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.83□□□□□ -1.16
TTC39C-210ENST00000584424 TREML1Q86YW5 311 aa7.83□□□□□ -1.16
TTC39C-210ENST00000584424 PPME1Q9Y570 386 aa7.83□□□□□ -1.16
TTC39C-210ENST00000584424 LINC01387J3KSC0 135 aa7.82□□□□□ -1.16
TTC39C-210ENST00000584424 FLIIQ13045 1269 aa7.82□□□□□ -1.16
TTC39C-210ENST00000584424 ACAD11Q709F0 780 aa7.82□□□□□ -1.16
TTC39C-210ENST00000584424 LRFN2Q9ULH4 789 aa7.82□□□□□ -1.16
TTC39C-210ENST00000584424 FOXO3O43524 673 aa7.81□□□□□ -1.16
TTC39C-210ENST00000584424 ADAMTS4O75173 837 aa7.81□□□□□ -1.16
TTC39C-210ENST00000584424 WISP1O95388 367 aa7.81□□□□□ -1.16
TTC39C-210ENST00000584424 GRIK1P39086 918 aa7.81□□□□□ -1.16
TTC39C-210ENST00000584424 ZDHHC13Q8IUH4 622 aa7.81□□□□□ -1.16
TTC39C-210ENST00000584424 ARMC10Q8N2F6 343 aa7.81□□□□□ -1.16
TTC39C-210ENST00000584424 GALNT11Q8NCW6 608 aa7.81□□□□□ -1.16
TTC39C-210ENST00000584424 UTP4Q969X6 686 aaKnown RBP7.81□□□□□ -1.16
TTC39C-210ENST00000584424 MYO19Q96H55 970 aa7.81□□□□□ -1.16
TTC39C-210ENST00000584424 LACRTQ9GZZ8 138 aa7.81□□□□□ -1.16
TTC39C-210ENST00000584424 MUC3BQ9H195 1237 aa7.81□□□□□ -1.16
TTC39C-210ENST00000584424 NFIAQ12857 509 aa7.8□□□□□ -1.16
TTC39C-210ENST00000584424 KANK4Q5T7N3 995 aaPredicted RBP7.8□□□□□ -1.16
TTC39C-210ENST00000584424 TRIM42Q8IWZ5 723 aa7.8□□□□□ -1.16
TTC39C-210ENST00000584424 CEP41Q9BYV8 373 aa7.8□□□□□ -1.16
TTC39C-210ENST00000584424 VRTNQ9H8Y1 702 aa7.8□□□□□ -1.16
TTC39C-210ENST00000584424 KCNMB2Q9Y691 235 aa7.8□□□□□ -1.16
TTC39C-210ENST00000584424 HMX2A2RU54 273 aa7.79□□□□□ -1.16
TTC39C-210ENST00000584424 WEE1P30291 646 aa7.79□□□□□ -1.16
TTC39C-210ENST00000584424 CD68P34810 354 aaPredicted RBP7.79□□□□□ -1.16
TTC39C-210ENST00000584424 SOX18P35713 384 aa7.79□□□□□ -1.16
TTC39C-210ENST00000584424 CARD10Q9BWT7 1032 aa7.79□□□□□ -1.16
TTC39C-210ENST00000584424 C7orf69Q9H7B7 122 aa7.79□□□□□ -1.16
TTC39C-210ENST00000584424 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.79□□□□□ -1.16
TTC39C-210ENST00000584424 KCNK4Q9NYG8 393 aa7.79□□□□□ -1.16
TTC39C-210ENST00000584424 FAM196BA6NMK8 535 aa7.78□□□□□ -1.16
TTC39C-210ENST00000584424 INTS5Q6P9B9 1019 aaKnown RBP7.78□□□□□ -1.16
TTC39C-210ENST00000584424 PPP1R12CQ9BZL4 782 aa7.78□□□□□ -1.16
TTC39C-210ENST00000584424 LMOD1P29536 600 aaPredicted RBP7.77□□□□□ -1.17
TTC39C-210ENST00000584424 CEP135Q66GS9 1140 aa7.77□□□□□ -1.17
TTC39C-210ENST00000584424 NLRP13Q86W25 1043 aa7.77□□□□□ -1.17
TTC39C-210ENST00000584424 CLUAP1Q96AJ1 413 aa7.77□□□□□ -1.17
TTC39C-210ENST00000584424 SPINK2P20155 84 aa7.76□□□□□ -1.17
TTC39C-210ENST00000584424 ATP11AP98196 1134 aa7.76□□□□□ -1.17
TTC39C-210ENST00000584424 DUOXA2Q1HG44 320 aa7.76□□□□□ -1.17
TTC39C-210ENST00000584424 COX20Q5RI15 118 aa7.76□□□□□ -1.17
TTC39C-210ENST00000584424 CACTIN-AS1Q8N1I8 211 aa7.76□□□□□ -1.17
TTC39C-210ENST00000584424 SPACA7Q96KW9 195 aa7.76□□□□□ -1.17
TTC39C-210ENST00000584424 CALR3Q96L12 384 aaKnown RBP7.76□□□□□ -1.17
TTC39C-210ENST00000584424 ARXQ96QS3 562 aa7.76□□□□□ -1.17
TTC39C-210ENST00000584424 DBNDD2Q9BQY9 259 aa7.76□□□□□ -1.17
TTC39C-210ENST00000584424 KCNF1Q9H3M0 494 aa7.76□□□□□ -1.17
TTC39C-210ENST00000584424 WNT11O96014 354 aa7.75□□□□□ -1.17
TTC39C-210ENST00000584424 HOXD8P13378 290 aaPredicted RBP7.75□□□□□ -1.17
TTC39C-210ENST00000584424 CDC27P30260 824 aa7.75□□□□□ -1.17
TTC39C-210ENST00000584424 TRIP4Q15650 581 aaPredicted RBP7.75□□□□□ -1.17
TTC39C-210ENST00000584424 COL13A1Q5TAT6 717 aaPredicted RBP7.75□□□□□ -1.17
TTC39C-210ENST00000584424 RNF43Q68DV7 783 aa7.75□□□□□ -1.17
TTC39C-210ENST00000584424 ABCC9O60706 1549 aa7.74□□□□□ -1.17
TTC39C-210ENST00000584424 UBAP1LF5GYI3 381 aa7.74□□□□□ -1.17
TTC39C-210ENST00000584424 DDX3YO15523 660 aaKnown RBP7.74□□□□□ -1.17
TTC39C-210ENST00000584424 SMNDC1O75940 238 aaKnown RBP eCLIP7.74□□□□□ -1.17
TTC39C-210ENST00000584424 FZD5Q13467 585 aa7.74□□□□□ -1.17
TTC39C-210ENST00000584424 UVSSAQ2YD98 709 aa7.74□□□□□ -1.17
TTC39C-210ENST00000584424 FAM117BQ6P1L5 589 aa7.74□□□□□ -1.17
TTC39C-210ENST00000584424 KIAA1211Q6ZU35 1233 aa7.74□□□□□ -1.17
TTC39C-210ENST00000584424 MYRFLQ96LU7 910 aa7.74□□□□□ -1.17
TTC39C-210ENST00000584424 PRR19A6NJB7 356 aa7.73□□□□□ -1.17
TTC39C-210ENST00000584424 FSCN2O14926 492 aa7.73□□□□□ -1.17
TTC39C-210ENST00000584424 SART1O43290 800 aaKnown RBP7.73□□□□□ -1.17
TTC39C-210ENST00000584424 SCNN1AP37088 669 aa7.73□□□□□ -1.17
TTC39C-210ENST00000584424 HYAL2Q12891 473 aa7.73□□□□□ -1.17
TTC39C-210ENST00000584424 FKBP5Q13451 457 aaPredicted RBP7.73□□□□□ -1.17
TTC39C-210ENST00000584424 PROSER2Q86WR7 435 aaPredicted RBP7.73□□□□□ -1.17
TTC39C-210ENST00000584424 DTX1Q86Y01 620 aa7.73□□□□□ -1.17
TTC39C-210ENST00000584424 ETFBKMTQ8IXQ9 262 aa7.73□□□□□ -1.17
TTC39C-210ENST00000584424 SHKBP1Q8TBC3 707 aa7.73□□□□□ -1.17
TTC39C-210ENST00000584424 FAM200AQ8TCP9 573 aa7.73□□□□□ -1.17
TTC39C-210ENST00000584424 UBASH3BQ8TF42 649 aa7.73□□□□□ -1.17
TTC39C-210ENST00000584424 FAM46AQ96IP4 442 aaKnown RBP7.73□□□□□ -1.17
TTC39C-210ENST00000584424 OR13H1Q8NG92 308 aa7.72□□□□□ -1.17
TTC39C-210ENST00000584424 PRIMPOLQ96LW4 560 aa7.72□□□□□ -1.17
TTC39C-210ENST00000584424 RASSF4Q9H2L5 321 aa7.72□□□□□ -1.17
TTC39C-210ENST00000584424 SH2B1Q9NRF2 756 aaPredicted RBP7.72□□□□□ -1.17
TTC39C-210ENST00000584424 A6NJR5 290 aa7.71□□□□□ -1.18
TTC39C-210ENST00000584424 FAM177BA6PVY3 158 aa7.71□□□□□ -1.18
TTC39C-210ENST00000584424 BMP3P12645 472 aa7.71□□□□□ -1.18
TTC39C-210ENST00000584424 CDCA8Q53HL2 280 aa7.71□□□□□ -1.18
TTC39C-210ENST00000584424 TTC39BQ5VTQ0 682 aaPredicted RBP7.71□□□□□ -1.18
TTC39C-210ENST00000584424 ADAMTSL4Q6UY14 1074 aa7.71□□□□□ -1.18
TTC39C-210ENST00000584424 BEND4Q6ZU67 534 aa7.71□□□□□ -1.18
TTC39C-210ENST00000584424 CLEC10AQ8IUN9 316 aa7.71□□□□□ -1.18
TTC39C-210ENST00000584424 FAM20CQ8IXL6 584 aa7.71□□□□□ -1.18
TTC39C-210ENST00000584424 WDR64B1ANS9 1081 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms