RNA–Protein interactions for RNA: ENST00000570606.5

SMG6-204, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-204ENST00000570606 COL13A1Q5TAT6 717 aaPredicted RBP8.55□□□□□ -1.04
SMG6-204ENST00000570606 PADI6Q6TGC4 694 aa8.55□□□□□ -1.04
SMG6-204ENST00000570606 OLFM4Q6UX06 510 aa8.55□□□□□ -1.04
SMG6-204ENST00000570606 LDHDQ86WU2 507 aa8.55□□□□□ -1.04
SMG6-204ENST00000570606 NUTM1Q86Y26 1132 aa8.55□□□□□ -1.04
SMG6-204ENST00000570606 RTKN2Q8IZC4 609 aa8.55□□□□□ -1.04
SMG6-204ENST00000570606 TNS4Q8IZW8 715 aa8.55□□□□□ -1.04
SMG6-204ENST00000570606 TTC13Q8NBP0 860 aa8.55□□□□□ -1.04
SMG6-204ENST00000570606 C7orf43Q8WVR3 580 aa8.55□□□□□ -1.04
SMG6-204ENST00000570606 RPGRQ92834 1020 aaKnown RBP8.55□□□□□ -1.04
SMG6-204ENST00000570606 THUMPD2Q9BTF0 503 aaKnown RBP8.55□□□□□ -1.04
SMG6-204ENST00000570606 ZBTB3Q9H5J0 574 aa8.55□□□□□ -1.04
SMG6-204ENST00000570606 RBM27Q9P2N5 1060 aaKnown RBP8.55□□□□□ -1.04
SMG6-204ENST00000570606 MKRN1Q9UHC7 482 aaKnown RBP8.55□□□□□ -1.04
SMG6-204ENST00000570606 RRP7AQ9Y3A4 280 aaKnown RBP8.55□□□□□ -1.04
SMG6-204ENST00000570606 IBTKQ9P2D0 1353 aaPredicted RBP8.55□□□□□ -1.04
SMG6-204ENST00000570606 RIC1Q4ADV7 1423 aa8.54□□□□□ -1.04
SMG6-204ENST00000570606 LAMB2P55268 1798 aa8.54□□□□□ -1.04
SMG6-204ENST00000570606 ADAMTSL1Q8N6G6 1762 aa8.54□□□□□ -1.04
SMG6-204ENST00000570606 KLRG2A4D1S0 409 aaPredicted RBP8.54□□□□□ -1.04
SMG6-204ENST00000570606 ERVV-1B6SEH8 477 aa8.54□□□□□ -1.04
SMG6-204ENST00000570606 IARSP41252 1262 aaKnown RBP8.54□□□□□ -1.04
SMG6-204ENST00000570606 EIF4A1P60842 406 aaKnown RBP8.54□□□□□ -1.04
SMG6-204ENST00000570606 PNNQ9H307 717 aaKnown RBP8.54□□□□□ -1.04
SMG6-204ENST00000570606 TAF1DQ9H5J8 278 aaPredicted RBP8.54□□□□□ -1.04
SMG6-204ENST00000570606 TSPYL4Q9UJ04 414 aa8.54□□□□□ -1.04
SMG6-204ENST00000570606 HACL1Q9UJ83 578 aa8.54□□□□□ -1.04
SMG6-204ENST00000570606 RNF123Q5XPI4 1314 aa8.54□□□□□ -1.04
SMG6-204ENST00000570606 TTLL7Q6ZT98 887 aa8.53□□□□□ -1.04
SMG6-204ENST00000570606 METTL3Q86U44 580 aaKnown RBP8.53□□□□□ -1.04
SMG6-204ENST00000570606 SYNE4Q8N205 404 aa8.53□□□□□ -1.04
SMG6-204ENST00000570606 JDP2Q8WYK2 163 aa8.53□□□□□ -1.04
SMG6-204ENST00000570606 PLEKHF1Q96S99 279 aa8.53□□□□□ -1.04
SMG6-204ENST00000570606 LHX6Q9UPM6 363 aa8.53□□□□□ -1.04
SMG6-204ENST00000570606 ADGRG1Q9Y653 693 aa8.53□□□□□ -1.04
SMG6-204ENST00000570606 ERBB4Q15303 1308 aa8.53□□□□□ -1.04
SMG6-204ENST00000570606 UBN2Q6ZU65 1347 aa8.53□□□□□ -1.04
SMG6-204ENST00000570606 CNTNAP1P78357 1384 aa8.52□□□□□ -1.05
SMG6-204ENST00000570606 TRPM7Q96QT4 1865 aa8.52□□□□□ -1.05
SMG6-204ENST00000570606 PPEF1O14829 653 aaPredicted RBP8.52□□□□□ -1.05
SMG6-204ENST00000570606 EPHX2P34913 555 aa8.52□□□□□ -1.05
SMG6-204ENST00000570606 CLCN1P35523 988 aa8.52□□□□□ -1.05
SMG6-204ENST00000570606 EIF6P56537 245 aaKnown RBP8.52□□□□□ -1.05
SMG6-204ENST00000570606 FAM161AQ3B820 660 aa8.52□□□□□ -1.05
SMG6-204ENST00000570606 CRY2Q49AN0 593 aa8.52□□□□□ -1.05
SMG6-204ENST00000570606 PPP1R42Q7Z4L9 355 aa8.52□□□□□ -1.05
SMG6-204ENST00000570606 ZNF710Q8N1W2 664 aa8.52□□□□□ -1.05
SMG6-204ENST00000570606 RBM17Q96I25 401 aaKnown RBP8.52□□□□□ -1.05
SMG6-204ENST00000570606 PSMD1Q99460 953 aa8.52□□□□□ -1.05
SMG6-204ENST00000570606 GPCPD1Q9NPB8 672 aa8.52□□□□□ -1.05
SMG6-204ENST00000570606 SNED1Q8TER0 1413 aa8.52□□□□□ -1.05
SMG6-204ENST00000570606 COL4A5P29400 1685 aa8.52□□□□□ -1.05
SMG6-204ENST00000570606 PASKQ96RG2 1323 aa8.52□□□□□ -1.05
SMG6-204ENST00000570606 TMEM88BA6NKF7 163 aa8.51□□□□□ -1.05
SMG6-204ENST00000570606 TCERG1O14776 1098 aaKnown RBP8.51□□□□□ -1.05
SMG6-204ENST00000570606 NTSR2O95665 410 aa8.51□□□□□ -1.05
SMG6-204ENST00000570606 EIF2S2P20042 333 aaKnown RBP8.51□□□□□ -1.05
SMG6-204ENST00000570606 LMOD1P29536 600 aaPredicted RBP8.51□□□□□ -1.05
SMG6-204ENST00000570606 MDM2Q00987 491 aaPredicted RBP8.51□□□□□ -1.05
SMG6-204ENST00000570606 LMOD3Q0VAK6 560 aa8.51□□□□□ -1.05
SMG6-204ENST00000570606 PARP10Q53GL7 1025 aa8.51□□□□□ -1.05
SMG6-204ENST00000570606 SUSD4Q5VX71 490 aa8.51□□□□□ -1.05
SMG6-204ENST00000570606 CC2D2BQ6DHV5 1058 aa8.51□□□□□ -1.05
SMG6-204ENST00000570606 PNMA8AQ86V59 439 aaPredicted RBP8.51□□□□□ -1.05
SMG6-204ENST00000570606 GPC2Q8N158 579 aa8.51□□□□□ -1.05
SMG6-204ENST00000570606 LARGE2Q8N3Y3 721 aa8.51□□□□□ -1.05
SMG6-204ENST00000570606 TMX4Q9H1E5 349 aaPredicted RBP8.51□□□□□ -1.05
SMG6-204ENST00000570606 GOPCQ9HD26 462 aa8.51□□□□□ -1.05
SMG6-204ENST00000570606 GJA3Q9Y6H8 435 aa8.51□□□□□ -1.05
SMG6-204ENST00000570606 LTBP1Q14766 1721 aa8.51□□□□□ -1.05
SMG6-204ENST00000570606 FZD9O00144 591 aa8.5□□□□□ -1.05
SMG6-204ENST00000570606 OATP04181 439 aa8.5□□□□□ -1.05
SMG6-204ENST00000570606 PRSS12P56730 875 aa8.5□□□□□ -1.05
SMG6-204ENST00000570606 RIPK4P57078 832 aa8.5□□□□□ -1.05
SMG6-204ENST00000570606 NIM1KQ8IY84 436 aa8.5□□□□□ -1.05
SMG6-204ENST00000570606 PXYLP1Q8TE99 480 aa8.5□□□□□ -1.05
SMG6-204ENST00000570606 AIDAQ96BJ3 306 aa8.5□□□□□ -1.05
SMG6-204ENST00000570606 PPIP5K2O43314 1243 aa8.49□□□□□ -1.05
SMG6-204ENST00000570606 ANXA1P04083 346 aa8.49□□□□□ -1.05
SMG6-204ENST00000570606 HOXA10P31260 410 aaPredicted RBP8.49□□□□□ -1.05
SMG6-204ENST00000570606 RALBP1Q15311 655 aa8.49□□□□□ -1.05
SMG6-204ENST00000570606 GRIPAP1Q4V328 841 aa8.49□□□□□ -1.05
SMG6-204ENST00000570606 MAP1SQ66K74 1059 aaPredicted RBP8.49□□□□□ -1.05
SMG6-204ENST00000570606 SLC51AQ86UW1 340 aa8.49□□□□□ -1.05
SMG6-204ENST00000570606 ZNF34Q8IZ26 560 aa8.49□□□□□ -1.05
SMG6-204ENST00000570606 NECTIN2Q92692 538 aa8.49□□□□□ -1.05
SMG6-204ENST00000570606 CDCA7LQ96GN5 454 aa8.49□□□□□ -1.05
SMG6-204ENST00000570606 NLRP3Q96P20 1036 aa8.49□□□□□ -1.05
SMG6-204ENST00000570606 CRAMP1Q96RY5 1269 aa8.49□□□□□ -1.05
SMG6-204ENST00000570606 UTP14AQ9BVJ6 771 aaKnown RBP8.49□□□□□ -1.05
SMG6-204ENST00000570606 ABT1Q9ULW3 272 aaKnown RBP8.49□□□□□ -1.05
SMG6-204ENST00000570606 ABCC4O15439 1325 aa8.49□□□□□ -1.05
SMG6-204ENST00000570606 TAF1P21675 1872 aa8.49□□□□□ -1.05
SMG6-204ENST00000570606 DDX60Q8IY21 1712 aaKnown RBP8.49□□□□□ -1.05
SMG6-204ENST00000570606 COL9A1P20849 921 aa8.48□□□□□ -1.05
SMG6-204ENST00000570606 TMPOP42166 694 aaKnown RBP8.48□□□□□ -1.05
SMG6-204ENST00000570606 VEGFBP49765 207 aa8.48□□□□□ -1.05
SMG6-204ENST00000570606 AIMP1Q12904 312 aaKnown RBP8.48□□□□□ -1.05
SMG6-204ENST00000570606 AOC3Q16853 763 aa8.48□□□□□ -1.05
SMG6-204ENST00000570606 PROSER3Q2NL68 480 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms