RNA–Protein interactions for RNA: ENST00000568548.5

VAC14-210, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 1 (best)

Gene VAC14, Length 2,945 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-210ENST00000568548 TIMM10P62072 90 aa20.23■□□□□ 0.83
VAC14-210ENST00000568548 RNF20Q5VTR2 975 aa20.23■□□□□ 0.83
VAC14-210ENST00000568548 TUBGCP6Q96RT7 1819 aa20.23■□□□□ 0.83
VAC14-210ENST00000568548 APOBRQ0VD83 1088 aa20.23■□□□□ 0.83
VAC14-210ENST00000568548 CCDC144BQ3MJ40 725 aa20.23■□□□□ 0.83
VAC14-210ENST00000568548 CCDC144CPQ8IYA2 1237 aa20.23■□□□□ 0.83
VAC14-210ENST00000568548 PDCL2Q8N4E4 241 aa20.23■□□□□ 0.83
VAC14-210ENST00000568548 PRIMPOLQ96LW4 560 aa20.23■□□□□ 0.83
VAC14-210ENST00000568548 USP42Q9H9J4 1324 aaKnown RBP20.23■□□□□ 0.83
VAC14-210ENST00000568548 ZNF335Q9H4Z2 1342 aaPredicted RBP20.23■□□□□ 0.83
VAC14-210ENST00000568548 NPHP1O15259 732 aa20.23■□□□□ 0.83
VAC14-210ENST00000568548 ALDH1L1O75891 902 aa20.23■□□□□ 0.83
VAC14-210ENST00000568548 CYP21A2P08686 494 aa20.23■□□□□ 0.83
VAC14-210ENST00000568548 FILIP1Q7Z7B0 1213 aa20.23■□□□□ 0.83
VAC14-210ENST00000568548 GPHNQ9NQX3 736 aaPredicted RBP20.23■□□□□ 0.83
VAC14-210ENST00000568548 HSP90AB3PQ58FF7 597 aa20.22■□□□□ 0.83
VAC14-210ENST00000568548 ZNF496Q96IT1 587 aaPredicted RBP20.22■□□□□ 0.83
VAC14-210ENST00000568548 NEK1Q96PY6 1258 aa20.22■□□□□ 0.83
VAC14-210ENST00000568548 STRCQ7RTU9 1775 aa20.22■□□□□ 0.83
VAC14-210ENST00000568548 HOXB7P09629 217 aa20.22■□□□□ 0.83
VAC14-210ENST00000568548 SPTLC3Q9NUV7 552 aa20.22■□□□□ 0.83
VAC14-210ENST00000568548 TRMT1Q9NXH9 659 aaKnown RBP20.22■□□□□ 0.83
VAC14-210ENST00000568548 NEURL1BA8MQ27 555 aa20.21■□□□□ 0.83
VAC14-210ENST00000568548 GOLGA6L6A8MZA4 724 aa20.21■□□□□ 0.83
VAC14-210ENST00000568548 DDX58O95786 925 aaKnown RBP20.21■□□□□ 0.83
VAC14-210ENST00000568548 NEXNQ0ZGT2 675 aa20.21■□□□□ 0.83
VAC14-210ENST00000568548 GCKRQ14397 625 aa20.21■□□□□ 0.83
VAC14-210ENST00000568548 GJB4Q9NTQ9 266 aa20.21■□□□□ 0.83
VAC14-210ENST00000568548 ZNF330Q9Y3S2 320 aaPredicted RBP20.21■□□□□ 0.83
VAC14-210ENST00000568548 GOLIM4O00461 696 aa20.2■□□□□ 0.82
VAC14-210ENST00000568548 TATP17735 454 aaPredicted RBP20.2■□□□□ 0.82
VAC14-210ENST00000568548 SCRN1Q12765 414 aa20.2■□□□□ 0.82
VAC14-210ENST00000568548 C11orf57Q6ZUT1 292 aaPredicted RBP20.2■□□□□ 0.82
VAC14-210ENST00000568548 STOX1Q6ZVD7 989 aa20.2■□□□□ 0.82
VAC14-210ENST00000568548 MTERF4Q7Z6M4 381 aaKnown RBP20.2■□□□□ 0.82
VAC14-210ENST00000568548 DDX21Q9NR30 783 aaKnown RBP eCLIP20.2■□□□□ 0.82
VAC14-210ENST00000568548 EPB41L2O43491 1005 aaKnown RBP20.2■□□□□ 0.82
VAC14-210ENST00000568548 CACTINQ8WUQ7 758 aaKnown RBP20.2■□□□□ 0.82
VAC14-210ENST00000568548 SNRKQ9NRH2 765 aa20.2■□□□□ 0.82
VAC14-210ENST00000568548 CLIP2Q9UDT6 1046 aa20.2■□□□□ 0.82
VAC14-210ENST00000568548 PDCP20941 246 aa20.19■□□□□ 0.82
VAC14-210ENST00000568548 TTLL5Q6EMB2 1281 aa20.19■□□□□ 0.82
VAC14-210ENST00000568548 ZNF790Q6PG37 636 aa20.19■□□□□ 0.82
VAC14-210ENST00000568548 ZNF594Q96JF6 807 aaPredicted RBP20.19■□□□□ 0.82
VAC14-210ENST00000568548 FMNL2Q96PY5 1086 aa20.19■□□□□ 0.82
VAC14-210ENST00000568548 SLAIN2Q9P270 581 aa20.19■□□□□ 0.82
VAC14-210ENST00000568548 COL18A1P39060 1754 aa20.19■□□□□ 0.82
VAC14-210ENST00000568548 A0A087WZG4 1122 aa20.19■□□□□ 0.82
VAC14-210ENST00000568548 USP27XA6NNY8 438 aa20.19■□□□□ 0.82
VAC14-210ENST00000568548 HAND2P61296 217 aa20.19■□□□□ 0.82
VAC14-210ENST00000568548 ISM2Q6H9L7 571 aa20.19■□□□□ 0.82
VAC14-210ENST00000568548 SCAND2PQ9GZW5 306 aaPredicted RBP20.19■□□□□ 0.82
VAC14-210ENST00000568548 OVOS2A0A0G2JMS6 1433 aa20.18■□□□□ 0.82
VAC14-210ENST00000568548 KCNB2Q92953 911 aa20.18■□□□□ 0.82
VAC14-210ENST00000568548 CHMP4AQ9BY43 222 aa20.18■□□□□ 0.82
VAC14-210ENST00000568548 PXDNLA1KZ92 1463 aa20.18■□□□□ 0.82
VAC14-210ENST00000568548 TNNI3KQ59H18 835 aa20.18■□□□□ 0.82
VAC14-210ENST00000568548 ANKRD13DQ6ZTN6 518 aa20.18■□□□□ 0.82
VAC14-210ENST00000568548 FPGT-TNNI3KV9GXZ4 949 aa20.18■□□□□ 0.82
VAC14-210ENST00000568548 TPD52L1Q16890 204 aaPredicted RBP20.17■□□□□ 0.82
VAC14-210ENST00000568548 ZNF75DP51815 510 aa20.17■□□□□ 0.82
VAC14-210ENST00000568548 PTPN12Q05209 780 aaKnown RBP20.17■□□□□ 0.82
VAC14-210ENST00000568548 ZSCAN25Q6NSZ9 544 aa20.17■□□□□ 0.82
VAC14-210ENST00000568548 LMBR1LQ6UX01 489 aa20.17■□□□□ 0.82
VAC14-210ENST00000568548 GTF3C6Q969F1 213 aa20.17■□□□□ 0.82
VAC14-210ENST00000568548 TNNT1P13805 278 aa20.16■□□□□ 0.82
VAC14-210ENST00000568548 PTPN21Q16825 1174 aa20.16■□□□□ 0.82
VAC14-210ENST00000568548 GOLPH3LQ9H4A5 285 aa20.16■□□□□ 0.82
VAC14-210ENST00000568548 CLSTN2Q9H4D0 955 aa20.16■□□□□ 0.82
VAC14-210ENST00000568548 MEGF6O75095 1541 aa20.16■□□□□ 0.82
VAC14-210ENST00000568548 CCAR1Q8IX12 1150 aaKnown RBP20.16■□□□□ 0.82
VAC14-210ENST00000568548 PHKG2P15735 406 aa20.16■□□□□ 0.82
VAC14-210ENST00000568548 BIN1O00499 593 aa20.15■□□□□ 0.82
VAC14-210ENST00000568548 POLR3DP05423 398 aaPredicted RBP20.15■□□□□ 0.82
VAC14-210ENST00000568548 USP28Q96RU2 1077 aa20.15■□□□□ 0.82
VAC14-210ENST00000568548 HIP1O00291 1037 aa20.15■□□□□ 0.82
VAC14-210ENST00000568548 ME1P48163 572 aa20.15■□□□□ 0.82
VAC14-210ENST00000568548 ANKRD1Q15327 319 aa20.15■□□□□ 0.82
VAC14-210ENST00000568548 CRYBG1Q9Y4K1 1723 aa20.14■□□□□ 0.82
VAC14-210ENST00000568548 RESTQ13127 1097 aa20.14■□□□□ 0.82
VAC14-210ENST00000568548 SMAP1Q8IYB5 467 aaPredicted RBP20.14■□□□□ 0.81
VAC14-210ENST00000568548 GOLGA6L19H0YKK7 550 aa20.13■□□□□ 0.81
VAC14-210ENST00000568548 CPDO75976 1380 aa20.13■□□□□ 0.81
VAC14-210ENST00000568548 IFNL2Q8IZJ0 200 aa20.13■□□□□ 0.81
VAC14-210ENST00000568548 SLC52A2Q9HAB3 445 aa20.13■□□□□ 0.81
VAC14-210ENST00000568548 A0A1B0GVL5 298 aa20.13■□□□□ 0.81
VAC14-210ENST00000568548 PTPDC1A2A3K4 754 aa20.13■□□□□ 0.81
VAC14-210ENST00000568548 CTDNEP1O95476 244 aa20.13■□□□□ 0.81
VAC14-210ENST00000568548 ZSCAN20P17040 1043 aaPredicted RBP20.13■□□□□ 0.81
VAC14-210ENST00000568548 FKBP4Q02790 459 aaKnown RBP eCLIP20.13■□□□□ 0.81
VAC14-210ENST00000568548 PRDM11Q9NQV5 511 aa20.13■□□□□ 0.81
VAC14-210ENST00000568548 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.13■□□□□ 0.812e-7■■□□□ 13.3
VAC14-210ENST00000568548 HEG1Q9ULI3 1381 aa20.12■□□□□ 0.81
VAC14-210ENST00000568548 MED23Q9ULK4 1368 aa20.12■□□□□ 0.81
VAC14-210ENST00000568548 ZNF609O15014 1411 aa20.12■□□□□ 0.81
VAC14-210ENST00000568548 KDM6AO15550 1401 aaPredicted RBP20.12■□□□□ 0.81
VAC14-210ENST00000568548 SIPA1L3O60292 1781 aaPredicted RBP20.12■□□□□ 0.81
VAC14-210ENST00000568548 BECN2A8MW95 431 aa20.12■□□□□ 0.81
VAC14-210ENST00000568548 STK11IPQ8N1F8 1099 aa20.12■□□□□ 0.81
VAC14-210ENST00000568548 DDX19AQ9NUU7 478 aaKnown RBP20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms