RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 TMC4Q7Z404 712 aa13.18□□□□□ -0.3
UBFD1-205ENST00000566136 TRPC6Q9Y210 931 aa13.18□□□□□ -0.3
UBFD1-205ENST00000566136 METP08581 1390 aa13.17□□□□□ -0.3
UBFD1-205ENST00000566136 TREHO43280 583 aa13.17□□□□□ -0.3
UBFD1-205ENST00000566136 SPDYE1Q8NFV5 336 aaPredicted RBP13.17□□□□□ -0.3
UBFD1-205ENST00000566136 SNTG2Q9NY99 539 aa13.17□□□□□ -0.3
UBFD1-205ENST00000566136 NEXMIFQ5QGS0 1516 aa13.17□□□□□ -0.3
UBFD1-205ENST00000566136 SETBP1Q9Y6X0 1596 aa13.17□□□□□ -0.3
UBFD1-205ENST00000566136 NCOA3Q9Y6Q9 1424 aa13.17□□□□□ -0.3
UBFD1-205ENST00000566136 MYOM2P54296 1465 aa13.17□□□□□ -0.3
UBFD1-205ENST00000566136 CDC45O75419 566 aa13.17□□□□□ -0.3
UBFD1-205ENST00000566136 FGAP02671 866 aa13.17□□□□□ -0.3
UBFD1-205ENST00000566136 CDCA7LQ96GN5 454 aa13.17□□□□□ -0.3
UBFD1-205ENST00000566136 EPAS1Q99814 870 aa13.17□□□□□ -0.3
UBFD1-205ENST00000566136 CENPOQ9BU64 300 aa13.17□□□□□ -0.3
UBFD1-205ENST00000566136 AVENQ9NQS1 362 aaPredicted RBP13.17□□□□□ -0.3
UBFD1-205ENST00000566136 KIAA1210Q9ULL0 1709 aa13.16□□□□□ -0.3
UBFD1-205ENST00000566136 ATF4P18848 351 aaPredicted RBP13.16□□□□□ -0.3
UBFD1-205ENST00000566136 FMR1Q06787 632 aaKnown RBP eCLIP13.16□□□□□ -0.36e-7■■□□□ 13.9
UBFD1-205ENST00000566136 SIM2Q14190 667 aaPredicted RBP13.16□□□□□ -0.3
UBFD1-205ENST00000566136 NFE2L2Q16236 605 aa13.16□□□□□ -0.3
UBFD1-205ENST00000566136 C21orf62-AS1Q17RA5 79 aa13.16□□□□□ -0.3
UBFD1-205ENST00000566136 TUSC1Q2TAM9 212 aa13.16□□□□□ -0.3
UBFD1-205ENST00000566136 PLEKHG4Q58EX7 1191 aa13.16□□□□□ -0.3
UBFD1-205ENST00000566136 TAS1R3Q7RTX0 852 aa13.16□□□□□ -0.3
UBFD1-205ENST00000566136 C19orf44Q9H6X5 657 aa13.16□□□□□ -0.3
UBFD1-205ENST00000566136 EGFL7Q9UHF1 273 aa13.16□□□□□ -0.3
UBFD1-205ENST00000566136 NR1H3Q13133 447 aa13.16□□□□□ -0.3
UBFD1-205ENST00000566136 IPO4Q8TEX9 1081 aaKnown RBP13.16□□□□□ -0.3
UBFD1-205ENST00000566136 MYOM1P52179 1685 aa13.16□□□□□ -0.3
UBFD1-205ENST00000566136 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.16□□□□□ -0.3
UBFD1-205ENST00000566136 IFT172Q9UG01 1749 aa13.16□□□□□ -0.3
UBFD1-205ENST00000566136 ATF3P18847 181 aa13.15□□□□□ -0.3
UBFD1-205ENST00000566136 PPP2R1AP30153 589 aa13.15□□□□□ -0.3
UBFD1-205ENST00000566136 SOX11P35716 441 aa13.15□□□□□ -0.3
UBFD1-205ENST00000566136 DAB2P98082 770 aa13.15□□□□□ -0.3
UBFD1-205ENST00000566136 NKX2-3Q8TAU0 364 aa13.15□□□□□ -0.3
UBFD1-205ENST00000566136 ARNT2Q9HBZ2 717 aa13.15□□□□□ -0.3
UBFD1-205ENST00000566136 SRA1Q9HD15 236 aaKnown RBP13.15□□□□□ -0.3
UBFD1-205ENST00000566136 ENAMQ9NRM1 1142 aa13.15□□□□□ -0.3
UBFD1-205ENST00000566136 METTL5Q9NRN9 209 aaKnown RBP13.15□□□□□ -0.3
UBFD1-205ENST00000566136 HOMER2Q9NSB8 354 aa13.15□□□□□ -0.3
UBFD1-205ENST00000566136 PDZRN3Q9UPQ7 1066 aa13.15□□□□□ -0.3
UBFD1-205ENST00000566136 CHMP4BP1P59074 171 aa13.15□□□□□ -0.3
UBFD1-205ENST00000566136 IFRD1O00458 451 aaPredicted RBP13.14□□□□□ -0.31
UBFD1-205ENST00000566136 RGS17Q9UGC6 210 aaPredicted RBP13.14□□□□□ -0.31
UBFD1-205ENST00000566136 BLMP54132 1417 aaPredicted RBP13.14□□□□□ -0.31
UBFD1-205ENST00000566136 SCGB1D2O95969 90 aa13.14□□□□□ -0.31
UBFD1-205ENST00000566136 BRD3Q15059 726 aa13.14□□□□□ -0.31
UBFD1-205ENST00000566136 XRN1Q8IZH2 1706 aaKnown RBP13.14□□□□□ -0.31
UBFD1-205ENST00000566136 PAF1Q8N7H5 531 aa13.14□□□□□ -0.31
UBFD1-205ENST00000566136 ZBTB3Q9H5J0 574 aa13.14□□□□□ -0.31
UBFD1-205ENST00000566136 ADAMTS8Q9UP79 889 aa13.14□□□□□ -0.31
UBFD1-205ENST00000566136 PHLPP1O60346 1717 aa13.13□□□□□ -0.31
UBFD1-205ENST00000566136 PRSS47A8MTI9 375 aa13.13□□□□□ -0.31
UBFD1-205ENST00000566136 MZF1P28698 734 aaPredicted RBP13.13□□□□□ -0.31
UBFD1-205ENST00000566136 ICE2Q659A1 982 aa13.13□□□□□ -0.31
UBFD1-205ENST00000566136 SKAP1Q86WV1 359 aa13.13□□□□□ -0.31
UBFD1-205ENST00000566136 FTSJ3Q8IY81 847 aaKnown RBP13.13□□□□□ -0.31
UBFD1-205ENST00000566136 GPR182O15218 404 aa13.13□□□□□ -0.31
UBFD1-205ENST00000566136 FKBP4Q02790 459 aaKnown RBP eCLIP13.13□□□□□ -0.31
UBFD1-205ENST00000566136 LILRB2Q8N423 598 aa13.13□□□□□ -0.31
UBFD1-205ENST00000566136 RCAN3Q9UKA8 241 aa13.13□□□□□ -0.31
UBFD1-205ENST00000566136 ASXL1Q8IXJ9 1541 aa13.12□□□□□ -0.31
UBFD1-205ENST00000566136 NPHP1O15259 732 aa13.12□□□□□ -0.31
UBFD1-205ENST00000566136 RRP1P56182 461 aaKnown RBP13.12□□□□□ -0.31
UBFD1-205ENST00000566136 APBA2Q99767 749 aa13.12□□□□□ -0.31
UBFD1-205ENST00000566136 ZHX3Q9H4I2 956 aa13.12□□□□□ -0.31
UBFD1-205ENST00000566136 OATP04181 439 aa13.12□□□□□ -0.31
UBFD1-205ENST00000566136 VIL1P09327 827 aaKnown RBP13.12□□□□□ -0.31
UBFD1-205ENST00000566136 ETFBP38117 255 aa13.12□□□□□ -0.31
UBFD1-205ENST00000566136 EHHADHQ08426 723 aa13.12□□□□□ -0.31
UBFD1-205ENST00000566136 TOMM20Q15388 145 aa13.12□□□□□ -0.31
UBFD1-205ENST00000566136 MICALL2Q8IY33 904 aa13.12□□□□□ -0.31
UBFD1-205ENST00000566136 CCDC87Q9NVE4 849 aa13.12□□□□□ -0.31
UBFD1-205ENST00000566136 TRAK1Q9UPV9 953 aa13.12□□□□□ -0.31
UBFD1-205ENST00000566136 SHTN1A0MZ66 631 aa13.11□□□□□ -0.31
UBFD1-205ENST00000566136 MASP1P48740 699 aa13.11□□□□□ -0.31
UBFD1-205ENST00000566136 GOLGA2Q08379 1002 aa13.11□□□□□ -0.31
UBFD1-205ENST00000566136 RASA3Q14644 834 aa13.11□□□□□ -0.31
UBFD1-205ENST00000566136 SWI5Q1ZZU3 235 aa13.11□□□□□ -0.31
UBFD1-205ENST00000566136 CCDC96Q2M329 555 aa13.11□□□□□ -0.31
UBFD1-205ENST00000566136 CEP63Q96MT8 703 aa13.11□□□□□ -0.31
UBFD1-205ENST00000566136 NAP1L4Q99733 375 aaKnown RBP13.11□□□□□ -0.31
UBFD1-205ENST00000566136 CYLDQ9NQC7 956 aa13.11□□□□□ -0.31
UBFD1-205ENST00000566136 NRXN1Q9ULB1 1477 aa13.11□□□□□ -0.31
UBFD1-205ENST00000566136 F6X3S4 739 aa13.11□□□□□ -0.31
UBFD1-205ENST00000566136 PRPF3O43395 683 aaKnown RBP13.11□□□□□ -0.31
UBFD1-205ENST00000566136 TSPAN6O43657 245 aa13.11□□□□□ -0.31
UBFD1-205ENST00000566136 TMEM132EQ6IEE7 984 aa13.11□□□□□ -0.31
UBFD1-205ENST00000566136 SLC4A10Q6U841 1118 aa13.11□□□□□ -0.31
UBFD1-205ENST00000566136 SFI1A8K8P3 1242 aa13.1□□□□□ -0.31
UBFD1-205ENST00000566136 ALDH1L1O75891 902 aa13.1□□□□□ -0.31
UBFD1-205ENST00000566136 CDC27P30260 824 aa13.1□□□□□ -0.31
UBFD1-205ENST00000566136 FKBP5Q13451 457 aaPredicted RBP13.1□□□□□ -0.31
UBFD1-205ENST00000566136 WDR43Q15061 677 aaKnown RBP eCLIP13.1□□□□□ -0.31
UBFD1-205ENST00000566136 CNTN3Q9P232 1028 aa13.1□□□□□ -0.31
UBFD1-205ENST00000566136 LZTS1Q9Y250 596 aa13.1□□□□□ -0.31
UBFD1-205ENST00000566136 POU3F3P20264 500 aaPredicted RBP13.1□□□□□ -0.31
UBFD1-205ENST00000566136 PAK2Q13177 524 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms