RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 CAMTA1Q9Y6Y1 1673 aa8.99□□□□□ -0.97
ATXN3-249ENST00000564606 ERBB3P21860 1342 aa8.99□□□□□ -0.97
ATXN3-249ENST00000564606 SH3TC1Q8TE82 1336 aa8.99□□□□□ -0.97
ATXN3-249ENST00000564606 SETD1BQ9UPS6 1966 aaKnown RBP8.99□□□□□ -0.97
ATXN3-249ENST00000564606 RGPD8O14715 1765 aaPredicted RBP8.99□□□□□ -0.97
ATXN3-249ENST00000564606 ABCC12Q96J65 1359 aa8.99□□□□□ -0.97
ATXN3-249ENST00000564606 MRC1P22897 1456 aa8.98□□□□□ -0.97
ATXN3-249ENST00000564606 MAP4K4O95819 1239 aaPredicted RBP8.98□□□□□ -0.97
ATXN3-249ENST00000564606 CSB-PGBD3P0DP91 1061 aa8.98□□□□□ -0.97
ATXN3-249ENST00000564606 IL15P40933 162 aaPredicted RBP8.98□□□□□ -0.97
ATXN3-249ENST00000564606 NOLC1Q14978 699 aaKnown RBP eCLIP8.98□□□□□ -0.97
ATXN3-249ENST00000564606 RABL6Q3YEC7 729 aaPredicted RBP8.98□□□□□ -0.97
ATXN3-249ENST00000564606 CPLX2Q6PUV4 134 aaKnown RBP8.98□□□□□ -0.97
ATXN3-249ENST00000564606 POTEHQ6S545 545 aa8.98□□□□□ -0.97
ATXN3-249ENST00000564606 PROSER2Q86WR7 435 aaPredicted RBP8.98□□□□□ -0.97
ATXN3-249ENST00000564606 PDCL2Q8N4E4 241 aa8.98□□□□□ -0.97
ATXN3-249ENST00000564606 BICD2Q8TD16 824 aa8.98□□□□□ -0.97
ATXN3-249ENST00000564606 SUCLG2Q96I99 432 aa8.98□□□□□ -0.97
ATXN3-249ENST00000564606 HAUS7Q99871 368 aa8.98□□□□□ -0.97
ATXN3-249ENST00000564606 LARP6Q9BRS8 491 aaKnown RBP8.98□□□□□ -0.97
ATXN3-249ENST00000564606 NOL10Q9BSC4 688 aaKnown RBP8.98□□□□□ -0.97
ATXN3-249ENST00000564606 WDR70Q9NW82 654 aa8.98□□□□□ -0.97
ATXN3-249ENST00000564606 JCADQ9P266 1359 aa8.98□□□□□ -0.97
ATXN3-249ENST00000564606 MED23Q9ULK4 1368 aa8.98□□□□□ -0.97
ATXN3-249ENST00000564606 MARF1Q9Y4F3 1742 aaKnown RBP8.97□□□□□ -0.97
ATXN3-249ENST00000564606 CCP110O43303 1012 aa8.97□□□□□ -0.97
ATXN3-249ENST00000564606 CIAO1O76071 339 aa8.97□□□□□ -0.97
ATXN3-249ENST00000564606 PHKG2P15735 406 aa8.97□□□□□ -0.97
ATXN3-249ENST00000564606 CDC25BP30305 580 aa8.97□□□□□ -0.97
ATXN3-249ENST00000564606 CABP4P57796 275 aa8.97□□□□□ -0.97
ATXN3-249ENST00000564606 DNM1Q05193 864 aaKnown RBP8.97□□□□□ -0.97
ATXN3-249ENST00000564606 AIMP1Q12904 312 aaKnown RBP8.97□□□□□ -0.97
ATXN3-249ENST00000564606 MFSD10Q14728 455 aa8.97□□□□□ -0.97
ATXN3-249ENST00000564606 ME3Q16798 604 aa8.97□□□□□ -0.97
ATXN3-249ENST00000564606 TNNI3KQ59H18 835 aa8.97□□□□□ -0.97
ATXN3-249ENST00000564606 CCDC158Q5M9N0 1113 aa8.97□□□□□ -0.97
ATXN3-249ENST00000564606 DHX32Q7L7V1 743 aaKnown RBP8.97□□□□□ -0.97
ATXN3-249ENST00000564606 DRC7Q8IY82 874 aa8.97□□□□□ -0.97
ATXN3-249ENST00000564606 KBTBD3Q8NAB2 608 aa8.97□□□□□ -0.97
ATXN3-249ENST00000564606 MYRIPQ8NFW9 859 aa8.97□□□□□ -0.97
ATXN3-249ENST00000564606 GTF3C6Q969F1 213 aa8.97□□□□□ -0.97
ATXN3-249ENST00000564606 CCDC34Q96HJ3 373 aa8.97□□□□□ -0.97
ATXN3-249ENST00000564606 BOLA2Q9H3K6 86 aa8.97□□□□□ -0.97
ATXN3-249ENST00000564606 SPTLC3Q9NUV7 552 aa8.97□□□□□ -0.97
ATXN3-249ENST00000564606 ANO10Q9NW15 660 aa8.97□□□□□ -0.97
ATXN3-249ENST00000564606 NLRP2Q9NX02 1062 aa8.97□□□□□ -0.97
ATXN3-249ENST00000564606 PAXBP1Q9Y5B6 917 aa8.97□□□□□ -0.97
ATXN3-249ENST00000564606 FPGT-TNNI3KV9GXZ4 949 aa8.97□□□□□ -0.97
ATXN3-249ENST00000564606 PALLDQ8WX93 1383 aa8.97□□□□□ -0.97
ATXN3-249ENST00000564606 BECN2A8MW95 431 aa8.96□□□□□ -0.98
ATXN3-249ENST00000564606 ERVV-2B6SEH9 535 aa8.96□□□□□ -0.98
ATXN3-249ENST00000564606 MYO1BO43795 1136 aa8.96□□□□□ -0.98
ATXN3-249ENST00000564606 KINO60870 393 aaKnown RBP8.96□□□□□ -0.98
ATXN3-249ENST00000564606 SASH1O94885 1247 aa8.96□□□□□ -0.98
ATXN3-249ENST00000564606 HCLS1P14317 486 aaPredicted RBP8.96□□□□□ -0.98
ATXN3-249ENST00000564606 GTF2F1P35269 517 aaKnown RBP eCLIP8.96□□□□□ -0.98
ATXN3-249ENST00000564606 PTH1RQ03431 593 aa8.96□□□□□ -0.98
ATXN3-249ENST00000564606 SYCP1Q15431 976 aa8.96□□□□□ -0.98
ATXN3-249ENST00000564606 COPS6Q7L5N1 327 aa8.96□□□□□ -0.98
ATXN3-249ENST00000564606 FBXL16Q8N461 479 aa8.96□□□□□ -0.98
ATXN3-249ENST00000564606 JMYQ8N9B5 988 aa8.96□□□□□ -0.98
ATXN3-249ENST00000564606 CCDC191Q8NCU4 936 aa8.96□□□□□ -0.98
ATXN3-249ENST00000564606 XAGE3Q8WTP9 111 aa8.96□□□□□ -0.98
ATXN3-249ENST00000564606 EAF2Q96CJ1 260 aaPredicted RBP8.96□□□□□ -0.98
ATXN3-249ENST00000564606 ZNF274Q96GC6 653 aaPredicted RBP8.96□□□□□ -0.98
ATXN3-249ENST00000564606 MYD88Q99836 296 aa8.96□□□□□ -0.98
ATXN3-249ENST00000564606 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.96□□□□□ -0.98
ATXN3-249ENST00000564606 CCDC8Q9H0W5 538 aaPredicted RBP8.96□□□□□ -0.98
ATXN3-249ENST00000564606 CLSTN2Q9H4D0 955 aa8.96□□□□□ -0.98
ATXN3-249ENST00000564606 CWC25Q9NXE8 425 aaPredicted RBP8.96□□□□□ -0.98
ATXN3-249ENST00000564606 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.96□□□□□ -0.98
ATXN3-249ENST00000564606 ADAMTS7Q9UKP4 1686 aa8.96□□□□□ -0.98
ATXN3-249ENST00000564606 WDR19Q8NEZ3 1342 aa8.96□□□□□ -0.98
ATXN3-249ENST00000564606 A0A087WZG4 1122 aa8.95□□□□□ -0.98
ATXN3-249ENST00000564606 GADD45BO75293 160 aaPredicted RBP8.95□□□□□ -0.98
ATXN3-249ENST00000564606 TAF5LO75529 589 aa8.95□□□□□ -0.98
ATXN3-249ENST00000564606 GABBR2O75899 941 aa8.95□□□□□ -0.98
ATXN3-249ENST00000564606 CDKL5O76039 1030 aa8.95□□□□□ -0.98
ATXN3-249ENST00000564606 GSDMDP57764 484 aa8.95□□□□□ -0.98
ATXN3-249ENST00000564606 IRX5P78411 483 aaPredicted RBP8.95□□□□□ -0.98
ATXN3-249ENST00000564606 XPCQ01831 940 aaPredicted RBP8.95□□□□□ -0.98
ATXN3-249ENST00000564606 TYRO3Q06418 890 aa8.95□□□□□ -0.98
ATXN3-249ENST00000564606 TTF1Q15361 905 aaPredicted RBP8.95□□□□□ -0.98
ATXN3-249ENST00000564606 STX1AQ16623 288 aa8.95□□□□□ -0.98
ATXN3-249ENST00000564606 CWF19L2Q2TBE0 894 aaKnown RBP8.95□□□□□ -0.98
ATXN3-249ENST00000564606 HSP90AB3PQ58FF7 597 aa8.95□□□□□ -0.98
ATXN3-249ENST00000564606 ASTLQ6HA08 431 aaPredicted RBP8.95□□□□□ -0.98
ATXN3-249ENST00000564606 LRRC59Q96AG4 307 aaKnown RBP8.95□□□□□ -0.98
ATXN3-249ENST00000564606 HOOK1Q9UJC3 728 aaKnown RBP8.95□□□□□ -0.98
ATXN3-249ENST00000564606 TPCN1Q9ULQ1 816 aa8.95□□□□□ -0.98
ATXN3-249ENST00000564606 PCDH11XQ9BZA7 1347 aa8.95□□□□□ -0.98
ATXN3-249ENST00000564606 PCDH11YQ9BZA8 1340 aa8.95□□□□□ -0.98
ATXN3-249ENST00000564606 PFKFB2O60825 505 aa8.94□□□□□ -0.98
ATXN3-249ENST00000564606 TRDNQ13061 729 aa8.94□□□□□ -0.98
ATXN3-249ENST00000564606 E2F4Q16254 413 aa8.94□□□□□ -0.98
ATXN3-249ENST00000564606 IMMTQ16891 758 aaKnown RBP8.94□□□□□ -0.98
ATXN3-249ENST00000564606 GORABQ5T7V8 394 aa8.94□□□□□ -0.98
ATXN3-249ENST00000564606 RBM43Q6ZSC3 357 aaKnown RBP8.94□□□□□ -0.98
ATXN3-249ENST00000564606 BRAPQ7Z569 592 aa8.94□□□□□ -0.98
ATXN3-249ENST00000564606 CEP57L1Q8IYX8 460 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms