RNA–Protein interactions for RNA: ENST00000559833.5

TRIP4-208, Transcript of thyroid hormone receptor interactor 4, human

TSL 3

Gene TRIP4, Length 636 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIP4-208	ENST00000559833	PDE4A	P27815	886 aa		11.5	□□□□□ -0.57
TRIP4-208	ENST00000559833	PROSER3	Q2NL68	480 aa		11.5	□□□□□ -0.57
TRIP4-208	ENST00000559833	RUNDC1	Q96C34	613 aa		11.5	□□□□□ -0.57
TRIP4-208	ENST00000559833	PSMD1	Q99460	953 aa		11.5	□□□□□ -0.57
TRIP4-208	ENST00000559833	ZBTB3	Q9H5J0	574 aa		11.5	□□□□□ -0.57
TRIP4-208	ENST00000559833	RYDEN	Q9NUL5	291 aa	Known RBP	11.5	□□□□□ -0.57
TRIP4-208	ENST00000559833	SCN4A	P35499	1836 aa		11.49	□□□□□ -0.57
TRIP4-208	ENST00000559833	FZD9	O00144	591 aa		11.49	□□□□□ -0.57
TRIP4-208	ENST00000559833	GPT	P24298	496 aa		11.49	□□□□□ -0.57
TRIP4-208	ENST00000559833	GTF2E1	P29083	439 aa	Predicted RBP	11.49	□□□□□ -0.57
TRIP4-208	ENST00000559833	LMOD3	Q0VAK6	560 aa		11.49	□□□□□ -0.57
TRIP4-208	ENST00000559833	CC2D2B	Q6DHV5	1058 aa		11.49	□□□□□ -0.57
TRIP4-208	ENST00000559833	CRAMP1	Q96RY5	1269 aa		11.49	□□□□□ -0.57
TRIP4-208	ENST00000559833	IRX2	Q9BZI1	471 aa	Predicted RBP	11.49	□□□□□ -0.57
TRIP4-208	ENST00000559833	ADAMTS8	Q9UP79	889 aa		11.49	□□□□□ -0.57
TRIP4-208	ENST00000559833	PARP10	Q53GL7	1025 aa		11.48	□□□□□ -0.57
TRIP4-208	ENST00000559833	SYNE4	Q8N205	404 aa		11.48	□□□□□ -0.57
TRIP4-208	ENST00000559833	NBPF3	Q9H094	633 aa		11.48	□□□□□ -0.57
TRIP4-208	ENST00000559833	PRKRIP1	Q9H875	184 aa	Predicted RBP	11.48	□□□□□ -0.57
TRIP4-208	ENST00000559833	ZNF277	Q9NRM2	450 aa	Predicted RBP	11.48	□□□□□ -0.57
TRIP4-208	ENST00000559833	ANXA1	P04083	346 aa		11.47	□□□□□ -0.57
TRIP4-208	ENST00000559833	EIF2S2	P20042	333 aa	Known RBP	11.47	□□□□□ -0.57
TRIP4-208	ENST00000559833	IARS	P41252	1262 aa	Known RBP	11.47	□□□□□ -0.57
TRIP4-208	ENST00000559833	GRIPAP1	Q4V328	841 aa		11.47	□□□□□ -0.57
TRIP4-208	ENST00000559833	COPS6	Q7L5N1	327 aa		11.47	□□□□□ -0.57
TRIP4-208	ENST00000559833	PPP1R42	Q7Z4L9	355 aa		11.47	□□□□□ -0.57
TRIP4-208	ENST00000559833	CCDC146	Q8IYE0	955 aa		11.47	□□□□□ -0.57
TRIP4-208	ENST00000559833	TAF1D	Q9H5J8	278 aa	Predicted RBP	11.47	□□□□□ -0.57
TRIP4-208	ENST00000559833	DDX21	Q9NR30	783 aa	Known RBP eCLIP	11.47	□□□□□ -0.57
TRIP4-208	ENST00000559833	ANKRD36C	Q5JPF3	1778 aa		11.46	□□□□□ -0.57
TRIP4-208	ENST00000559833	ADAMTSL1	Q8N6G6	1762 aa		11.46	□□□□□ -0.57
TRIP4-208	ENST00000559833	COL4A5	P29400	1685 aa		11.46	□□□□□ -0.57
TRIP4-208	ENST00000559833	RNF123	Q5XPI4	1314 aa		11.46	□□□□□ -0.57
TRIP4-208	ENST00000559833	ZNF541	Q9H0D2	1346 aa		11.46	□□□□□ -0.57
TRIP4-208	ENST00000559833	IQCA1L	A6NCM1	817 aa		11.46	□□□□□ -0.57
TRIP4-208	ENST00000559833	HOXB7	P09629	217 aa		11.46	□□□□□ -0.57
TRIP4-208	ENST00000559833	ZNF853	P0CG23	659 aa		11.46	□□□□□ -0.57
TRIP4-208	ENST00000559833	TCIRG1	Q13488	830 aa		11.46	□□□□□ -0.57
TRIP4-208	ENST00000559833	KRT24	Q2M2I5	525 aa		11.46	□□□□□ -0.57
TRIP4-208	ENST00000559833	NLRP10	Q86W26	655 aa		11.46	□□□□□ -0.57
TRIP4-208	ENST00000559833	PASK	Q96RG2	1323 aa		11.45	□□□□□ -0.58
TRIP4-208	ENST00000559833	ITGBL1	O95965	494 aa	Predicted RBP	11.45	□□□□□ -0.58
TRIP4-208	ENST00000559833	NEUROD2	Q15784	382 aa		11.45	□□□□□ -0.58
TRIP4-208	ENST00000559833	SLC51A	Q86UW1	340 aa		11.45	□□□□□ -0.58
TRIP4-208	ENST00000559833	GPC2	Q8N158	579 aa		11.45	□□□□□ -0.58
TRIP4-208	ENST00000559833	XAGE3	Q8WTP9	111 aa		11.45	□□□□□ -0.58
TRIP4-208	ENST00000559833	RPGR	Q92834	1020 aa	Known RBP	11.45	□□□□□ -0.58
TRIP4-208	ENST00000559833	RBM17	Q96I25	401 aa	Known RBP	11.45	□□□□□ -0.58
TRIP4-208	ENST00000559833	CFAP44	Q96MT7	982 aa		11.45	□□□□□ -0.58
TRIP4-208	ENST00000559833	NLRP3	Q96P20	1036 aa		11.45	□□□□□ -0.58
TRIP4-208	ENST00000559833	UTP14A	Q9BVJ6	771 aa	Known RBP	11.45	□□□□□ -0.58
TRIP4-208	ENST00000559833	LAMB2	P55268	1798 aa		11.44	□□□□□ -0.58
TRIP4-208	ENST00000559833	HSP90AB3P	Q58FF7	597 aa		11.44	□□□□□ -0.58
TRIP4-208	ENST00000559833	LDHD	Q86WU2	507 aa		11.44	□□□□□ -0.58
TRIP4-208	ENST00000559833	VPS33B	Q9H267	617 aa		11.44	□□□□□ -0.58
TRIP4-208	ENST00000559833	ATP6V0A2	Q9Y487	856 aa		11.44	□□□□□ -0.58
TRIP4-208	ENST00000559833	PPP1R3G	B7ZBB8	358 aa		11.43	□□□□□ -0.58
TRIP4-208	ENST00000559833	WDR43	Q15061	677 aa	Known RBP eCLIP	11.43	□□□□□ -0.58
TRIP4-208	ENST00000559833	ISCA1	Q9BUE6	129 aa		11.43	□□□□□ -0.58
TRIP4-208	ENST00000559833	RTFDC1	Q9BY42	306 aa	Predicted RBP	11.43	□□□□□ -0.58
TRIP4-208	ENST00000559833	HACL1	Q9UJ83	578 aa		11.43	□□□□□ -0.58
TRIP4-208	ENST00000559833	PCDHGA10	Q9Y5H3	936 aa		11.43	□□□□□ -0.58
TRIP4-208	ENST00000559833	ABCC4	O15439	1325 aa		11.42	□□□□□ -0.58
TRIP4-208	ENST00000559833	PPEF1	O14829	653 aa	Predicted RBP	11.42	□□□□□ -0.58
TRIP4-208	ENST00000559833	BBOX1	O75936	387 aa		11.42	□□□□□ -0.58
TRIP4-208	ENST00000559833	AIMP1	Q12904	312 aa	Known RBP	11.42	□□□□□ -0.58
TRIP4-208	ENST00000559833	TRIM28	Q13263	835 aa	Known RBP	11.42	□□□□□ -0.58
TRIP4-208	ENST00000559833	MFSD10	Q14728	455 aa		11.42	□□□□□ -0.58
TRIP4-208	ENST00000559833	SP8	Q8IXZ3	490 aa		11.42	□□□□□ -0.58
TRIP4-208	ENST00000559833	JDP2	Q8WYK2	163 aa		11.42	□□□□□ -0.58
TRIP4-208	ENST00000559833	NECTIN2	Q92692	538 aa		11.42	□□□□□ -0.58
TRIP4-208	ENST00000559833	LARP6	Q9BRS8	491 aa	Known RBP	11.42	□□□□□ -0.58
TRIP4-208	ENST00000559833	MBIP	Q9NS73	344 aa		11.42	□□□□□ -0.58
TRIP4-208	ENST00000559833	EMILIN3	Q9NT22	766 aa		11.42	□□□□□ -0.58
TRIP4-208	ENST00000559833	CHPF2	Q9P2E5	772 aa		11.42	□□□□□ -0.58
TRIP4-208	ENST00000559833	DBF4	Q9UBU7	674 aa	Predicted RBP	11.42	□□□□□ -0.58
TRIP4-208	ENST00000559833	RABGEF1	Q9UJ41	708 aa		11.42	□□□□□ -0.58
TRIP4-208	ENST00000559833	LTBP1	Q14766	1721 aa		11.42	□□□□□ -0.58
TRIP4-208	ENST00000559833	HCLS1	P14317	486 aa	Predicted RBP	11.41	□□□□□ -0.58
TRIP4-208	ENST00000559833	COL9A1	P20849	921 aa		11.41	□□□□□ -0.58
TRIP4-208	ENST00000559833	EPHX2	P34913	555 aa		11.41	□□□□□ -0.58
TRIP4-208	ENST00000559833	PROX2	Q3B8N5	592 aa		11.41	□□□□□ -0.58
TRIP4-208	ENST00000559833	HDGFL1	Q5TGJ6	251 aa		11.41	□□□□□ -0.58
TRIP4-208	ENST00000559833	PNMA8A	Q86V59	439 aa	Predicted RBP	11.41	□□□□□ -0.58
TRIP4-208	ENST00000559833	PLBD2	Q8NHP8	589 aa		11.41	□□□□□ -0.58
TRIP4-208	ENST00000559833	DDX27	Q96GQ7	796 aa	Known RBP	11.41	□□□□□ -0.58
TRIP4-208	ENST00000559833	DDX60	Q8IY21	1712 aa	Known RBP	11.4	□□□□□ -0.58
TRIP4-208	ENST00000559833	SH3TC1	Q8TE82	1336 aa		11.4	□□□□□ -0.58
TRIP4-208	ENST00000559833	APAF1	O14727	1248 aa		11.4	□□□□□ -0.58
TRIP4-208	ENST00000559833	GTPBP6	O43824	516 aa	Predicted RBP	11.4	□□□□□ -0.58
TRIP4-208	ENST00000559833	SCNN1D	P51172	638 aa		11.4	□□□□□ -0.58
TRIP4-208	ENST00000559833	MAP3K9	P80192	1104 aa		11.4	□□□□□ -0.58
TRIP4-208	ENST00000559833	SF3B3	Q15393	1217 aa	Known RBP	11.4	□□□□□ -0.58
TRIP4-208	ENST00000559833	DUSP27	Q5VZP5	1158 aa		11.4	□□□□□ -0.58
TRIP4-208	ENST00000559833	HYPK	Q9NX55	129 aa		11.4	□□□□□ -0.58
TRIP4-208	ENST00000559833	TRMT112	Q9UI30	125 aa	Known RBP	11.4	□□□□□ -0.58
TRIP4-208	ENST00000559833	LAS1L	Q9Y4W2	734 aa	Known RBP	11.4	□□□□□ -0.58
TRIP4-208	ENST00000559833	TAF1	P21675	1872 aa		11.39	□□□□□ -0.59
TRIP4-208	ENST00000559833	EIF6	P56537	245 aa	Known RBP	11.39	□□□□□ -0.59
TRIP4-208	ENST00000559833	COL13A1	Q5TAT6	717 aa	Predicted RBP	11.39	□□□□□ -0.59

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