RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 LEO1Q8WVC0 666 aaPredicted RBP20.99■□□□□ 0.95
XRCC3-218ENST00000557439 FTOQ9C0B1 505 aaKnown RBP eCLIP20.99■□□□□ 0.95
XRCC3-218ENST00000557439 NUP62CLQ9H1M0 184 aa20.99■□□□□ 0.95
XRCC3-218ENST00000557439 PGBD1Q96JS3 809 aa20.99■□□□□ 0.95
XRCC3-218ENST00000557439 ARID3AQ99856 593 aa20.99■□□□□ 0.95
XRCC3-218ENST00000557439 NAP1L2Q9ULW6 460 aaPredicted RBP20.99■□□□□ 0.95
XRCC3-218ENST00000557439 CCT2P78371 535 aaKnown RBP20.98■□□□□ 0.95
XRCC3-218ENST00000557439 APOBRQ0VD83 1088 aa20.98■□□□□ 0.95
XRCC3-218ENST00000557439 KBTBD3Q8NAB2 608 aa20.98■□□□□ 0.95
XRCC3-218ENST00000557439 UBE2Q2Q8WVN8 375 aa20.98■□□□□ 0.95
XRCC3-218ENST00000557439 NCOA5Q9HCD5 579 aaKnown RBP20.98■□□□□ 0.95
XRCC3-218ENST00000557439 MRVI1Q9Y6F6 885 aa20.98■□□□□ 0.95
XRCC3-218ENST00000557439 GOLGA6L4A6NEF3 574 aa20.97■□□□□ 0.95
XRCC3-218ENST00000557439 NR1I2O75469 434 aa20.97■□□□□ 0.95
XRCC3-218ENST00000557439 TSC1Q92574 1164 aa20.97■□□□□ 0.95
XRCC3-218ENST00000557439 LMTK3Q96Q04 1460 aa20.97■□□□□ 0.95
XRCC3-218ENST00000557439 H7C1W4 665 aa20.97■□□□□ 0.95
XRCC3-218ENST00000557439 CCDC192P0DO97 292 aa20.97■□□□□ 0.95
XRCC3-218ENST00000557439 TYRO3Q06418 890 aa20.97■□□□□ 0.95
XRCC3-218ENST00000557439 MAP3K11Q16584 847 aa20.97■□□□□ 0.95
XRCC3-218ENST00000557439 PAG1Q9NWQ8 432 aa20.97■□□□□ 0.95
XRCC3-218ENST00000557439 U3KPZ7 1027 aaPredicted RBP20.97■□□□□ 0.95
XRCC3-218ENST00000557439 GLI3P10071 1580 aa20.97■□□□□ 0.95
XRCC3-218ENST00000557439 TTLL5Q6EMB2 1281 aa20.96■□□□□ 0.95
XRCC3-218ENST00000557439 ALDH8A1Q9H2A2 487 aaPredicted RBP20.96■□□□□ 0.95
XRCC3-218ENST00000557439 KRT32Q14532 448 aa20.96■□□□□ 0.95
XRCC3-218ENST00000557439 HSP90AB3PQ58FF7 597 aa20.96■□□□□ 0.95
XRCC3-218ENST00000557439 BICD2Q8TD16 824 aa20.96■□□□□ 0.95
XRCC3-218ENST00000557439 TNMDQ9H2S6 317 aa20.96■□□□□ 0.95
XRCC3-218ENST00000557439 H3BQV1 296 aa20.95■□□□□ 0.95
XRCC3-218ENST00000557439 GUCY1B3Q02153 619 aa20.95■□□□□ 0.95
XRCC3-218ENST00000557439 NOLC1Q14978 699 aaKnown RBP eCLIP20.95■□□□□ 0.95
XRCC3-218ENST00000557439 IFFO2Q5TF58 517 aa20.95■□□□□ 0.95
XRCC3-218ENST00000557439 KCNF1Q9H3M0 494 aa20.95■□□□□ 0.95
XRCC3-218ENST00000557439 CWC25Q9NXE8 425 aaPredicted RBP20.95■□□□□ 0.95
XRCC3-218ENST00000557439 RESTQ13127 1097 aa20.95■□□□□ 0.94
XRCC3-218ENST00000557439 ANO6Q4KMQ2 910 aa20.95■□□□□ 0.94
XRCC3-218ENST00000557439 TOM1L2Q6ZVM7 507 aa20.95■□□□□ 0.94
XRCC3-218ENST00000557439 GPHNQ9NQX3 736 aaPredicted RBP20.94■□□□□ 0.94
XRCC3-218ENST00000557439 PYCARDQ9ULZ3 195 aa20.94■□□□□ 0.94
XRCC3-218ENST00000557439 ELP1O95163 1332 aa20.94■□□□□ 0.94
XRCC3-218ENST00000557439 A0A087WWV3 80 aa20.94■□□□□ 0.94
XRCC3-218ENST00000557439 PIBF1Q8WXW3 757 aa20.94■□□□□ 0.94
XRCC3-218ENST00000557439 TNS3Q68CZ2 1445 aa20.94■□□□□ 0.94
XRCC3-218ENST00000557439 FAM177BA6PVY3 158 aa20.93■□□□□ 0.94
XRCC3-218ENST00000557439 CTDNEP1O95476 244 aa20.93■□□□□ 0.94
XRCC3-218ENST00000557439 SCAND2PQ9GZW5 306 aaPredicted RBP20.93■□□□□ 0.94
XRCC3-218ENST00000557439 STRCP1A6NGW2 1772 aa20.93■□□□□ 0.94
XRCC3-218ENST00000557439 A0A1B0GUL7 405 aa20.93■□□□□ 0.94
XRCC3-218ENST00000557439 LAMA4Q16363 1823 aa20.93■□□□□ 0.94
XRCC3-218ENST00000557439 SPATA31A3Q5VYP0 1347 aa20.93■□□□□ 0.94
XRCC3-218ENST00000557439 FKBP4Q02790 459 aaKnown RBP eCLIP20.92■□□□□ 0.94
XRCC3-218ENST00000557439 SASS6Q6UVJ0 657 aa20.92■□□□□ 0.94
XRCC3-218ENST00000557439 M0R2C6 588 aa20.92■□□□□ 0.94
XRCC3-218ENST00000557439 IFIT1P09914 478 aaKnown RBP20.92■□□□□ 0.94
XRCC3-218ENST00000557439 HSPD1P10809 573 aaKnown RBP20.92■□□□□ 0.94
XRCC3-218ENST00000557439 ADORA1P30542 326 aa20.92■□□□□ 0.94
XRCC3-218ENST00000557439 ZCRB1Q8TBF4 217 aaKnown RBP20.92■□□□□ 0.94
XRCC3-218ENST00000557439 CBX8Q9HC52 389 aa20.92■□□□□ 0.94
XRCC3-218ENST00000557439 PRDM11Q9NQV5 511 aa20.92■□□□□ 0.94
XRCC3-218ENST00000557439 MAST3O60307 1309 aa20.92■□□□□ 0.94
XRCC3-218ENST00000557439 TERF1P54274 439 aa20.92■□□□□ 0.94
XRCC3-218ENST00000557439 HAND2P61296 217 aa20.92■□□□□ 0.94
XRCC3-218ENST00000557439 RAB11FIP4Q86YS3 637 aa20.92■□□□□ 0.94
XRCC3-218ENST00000557439 NSUN7Q8NE18 718 aaKnown RBP20.92■□□□□ 0.94
XRCC3-218ENST00000557439 FAM200AQ8TCP9 573 aa20.92■□□□□ 0.94
XRCC3-218ENST00000557439 SH3TC1Q8TE82 1336 aa20.91■□□□□ 0.94
XRCC3-218ENST00000557439 PI16Q6UXB8 463 aa20.91■□□□□ 0.94
XRCC3-218ENST00000557439 DHX32Q7L7V1 743 aaKnown RBP20.91■□□□□ 0.94
XRCC3-218ENST00000557439 DNAJC25Q9H1X3 360 aa20.91■□□□□ 0.94
XRCC3-218ENST00000557439 PKD1L3Q7Z443 1732 aa20.9■□□□□ 0.94
XRCC3-218ENST00000557439 PTPDC1A2A3K4 754 aa20.9■□□□□ 0.94
XRCC3-218ENST00000557439 E7EWF7 191 aa20.9■□□□□ 0.94
XRCC3-218ENST00000557439 EYA2O00167 538 aa20.9■□□□□ 0.94
XRCC3-218ENST00000557439 HSPA2P54652 639 aa20.9■□□□□ 0.94
XRCC3-218ENST00000557439 ZMYM1Q5SVZ6 1142 aa20.9■□□□□ 0.94
XRCC3-218ENST00000557439 SYNE4Q8N205 404 aa20.9■□□□□ 0.94
XRCC3-218ENST00000557439 STRN4Q9NRL3 753 aa20.9■□□□□ 0.94
XRCC3-218ENST00000557439 PTGS1P23219 599 aa20.9■□□□□ 0.94
XRCC3-218ENST00000557439 OSBP2Q969R2 916 aa20.9■□□□□ 0.94
XRCC3-218ENST00000557439 ERCC4Q92889 916 aaPredicted RBP20.89■□□□□ 0.93
XRCC3-218ENST00000557439 CLSTN2Q9H4D0 955 aa20.89■□□□□ 0.93
XRCC3-218ENST00000557439 NRBP1Q9UHY1 535 aa20.89■□□□□ 0.93
XRCC3-218ENST00000557439 PFKFB2O60825 505 aa20.89■□□□□ 0.93
XRCC3-218ENST00000557439 IL15P40933 162 aaPredicted RBP20.89■□□□□ 0.93
XRCC3-218ENST00000557439 SCARF1Q14162 830 aa20.89■□□□□ 0.93
XRCC3-218ENST00000557439 PALLDQ8WX93 1383 aa20.88■□□□□ 0.93
XRCC3-218ENST00000557439 OTUD7BQ6GQQ9 843 aa20.88■□□□□ 0.93
XRCC3-218ENST00000557439 SMARCC2Q8TAQ2 1214 aa20.88■□□□□ 0.93
XRCC3-218ENST00000557439 FAM89AQ96GI7 184 aa20.88■□□□□ 0.93
XRCC3-218ENST00000557439 TAOK2Q9UL54 1235 aa20.88■□□□□ 0.93
XRCC3-218ENST00000557439 TJP1Q07157 1748 aa20.88■□□□□ 0.93
XRCC3-218ENST00000557439 ADD1P35611 737 aaKnown RBP20.88■□□□□ 0.93
XRCC3-218ENST00000557439 LAMB4A4D0S4 1761 aa20.87■□□□□ 0.93
XRCC3-218ENST00000557439 EXOSC10Q01780 885 aaKnown RBP20.87■□□□□ 0.93
XRCC3-218ENST00000557439 HELLSQ9NRZ9 838 aa20.87■□□□□ 0.93
XRCC3-218ENST00000557439 LRMPQ12912 555 aa20.87■□□□□ 0.93
XRCC3-218ENST00000557439 CADPS2Q86UW7 1296 aa20.87■□□□□ 0.93
XRCC3-218ENST00000557439 USP28Q96RU2 1077 aa20.87■□□□□ 0.93
XRCC3-218ENST00000557439 PCDH11XQ9BZA7 1347 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms