RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 OAS3Q9Y6K5 1087 aaKnown RBP8.15□□□□□ -1.1
SCFD1-218ENST00000556256 FAM196BA6NMK8 535 aa8.14□□□□□ -1.11
SCFD1-218ENST00000556256 COBLO75128 1261 aa8.14□□□□□ -1.11
SCFD1-218ENST00000556256 TGFB1P01137 390 aa8.14□□□□□ -1.11
SCFD1-218ENST00000556256 TREML1Q86YW5 311 aa8.14□□□□□ -1.11
SCFD1-218ENST00000556256 DCAF11Q8TEB1 546 aa8.14□□□□□ -1.11
SCFD1-218ENST00000556256 PPP1R12CQ9BZL4 782 aa8.14□□□□□ -1.11
SCFD1-218ENST00000556256 TRIM33Q9UPN9 1127 aa8.14□□□□□ -1.11
SCFD1-218ENST00000556256 KCNMB2Q9Y691 235 aa8.14□□□□□ -1.11
SCFD1-218ENST00000556256 KIAA1324LA8MWY0 1029 aaPredicted RBP8.13□□□□□ -1.11
SCFD1-218ENST00000556256 GSC2O15499 205 aa8.13□□□□□ -1.11
SCFD1-218ENST00000556256 HOXD8P13378 290 aaPredicted RBP8.13□□□□□ -1.11
SCFD1-218ENST00000556256 TAL1P17542 331 aaPredicted RBP8.13□□□□□ -1.11
SCFD1-218ENST00000556256 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.13□□□□□ -1.11
SCFD1-218ENST00000556256 FNBP4Q8N3X1 1017 aaPredicted RBP8.13□□□□□ -1.11
SCFD1-218ENST00000556256 ARXQ96QS3 562 aa8.13□□□□□ -1.11
SCFD1-218ENST00000556256 RBSNQ9H1K0 784 aa8.13□□□□□ -1.11
SCFD1-218ENST00000556256 SOX18P35713 384 aa8.12□□□□□ -1.11
SCFD1-218ENST00000556256 GP2P55259 537 aaKnown RBP8.12□□□□□ -1.11
SCFD1-218ENST00000556256 GALNT11Q8NCW6 608 aa8.12□□□□□ -1.11
SCFD1-218ENST00000556256 VRTNQ9H8Y1 702 aa8.12□□□□□ -1.11
SCFD1-218ENST00000556256 PPME1Q9Y570 386 aa8.12□□□□□ -1.11
SCFD1-218ENST00000556256 ARMC10Q8N2F6 343 aa8.11□□□□□ -1.11
SCFD1-218ENST00000556256 MUC3BQ9H195 1237 aa8.11□□□□□ -1.11
SCFD1-218ENST00000556256 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.11□□□□□ -1.11
SCFD1-218ENST00000556256 DHX15O43143 795 aaKnown RBP8.1□□□□□ -1.11
SCFD1-218ENST00000556256 ADAMTS4O75173 837 aa8.1□□□□□ -1.11
SCFD1-218ENST00000556256 WISP1O95388 367 aa8.1□□□□□ -1.11
SCFD1-218ENST00000556256 COX20Q5RI15 118 aa8.1□□□□□ -1.11
SCFD1-218ENST00000556256 ZDHHC13Q8IUH4 622 aa8.1□□□□□ -1.11
SCFD1-218ENST00000556256 CACTIN-AS1Q8N1I8 211 aa8.1□□□□□ -1.11
SCFD1-218ENST00000556256 CLUAP1Q96AJ1 413 aa8.1□□□□□ -1.11
SCFD1-218ENST00000556256 LINC01387J3KSC0 135 aa8.09□□□□□ -1.11
SCFD1-218ENST00000556256 YBX3P16989 372 aaKnown RBP eCLIP8.09□□□□□ -1.11
SCFD1-218ENST00000556256 LMOD1P29536 600 aaPredicted RBP8.09□□□□□ -1.11
SCFD1-218ENST00000556256 NLRP13Q86W25 1043 aa8.09□□□□□ -1.11
SCFD1-218ENST00000556256 KCNK4Q9NYG8 393 aa8.09□□□□□ -1.11
SCFD1-218ENST00000556256 CD68P34810 354 aaPredicted RBP8.08□□□□□ -1.12
SCFD1-218ENST00000556256 NFIAQ12857 509 aa8.08□□□□□ -1.12
SCFD1-218ENST00000556256 CALR3Q96L12 384 aaKnown RBP8.08□□□□□ -1.12
SCFD1-218ENST00000556256 CEP41Q9BYV8 373 aa8.08□□□□□ -1.12
SCFD1-218ENST00000556256 TM4SF5O14894 197 aa8.07□□□□□ -1.12
SCFD1-218ENST00000556256 TRIP4Q15650 581 aaPredicted RBP8.07□□□□□ -1.12
SCFD1-218ENST00000556256 TXNDC11Q6PKC3 985 aa8.07□□□□□ -1.12
SCFD1-218ENST00000556256 PROSER2Q86WR7 435 aaPredicted RBP8.07□□□□□ -1.12
SCFD1-218ENST00000556256 TRIM42Q8IWZ5 723 aa8.07□□□□□ -1.12
SCFD1-218ENST00000556256 SPINK2P20155 84 aa8.06□□□□□ -1.12
SCFD1-218ENST00000556256 COL13A1Q5TAT6 717 aaPredicted RBP8.06□□□□□ -1.12
SCFD1-218ENST00000556256 INTS5Q6P9B9 1019 aaKnown RBP8.06□□□□□ -1.12
SCFD1-218ENST00000556256 ACAD11Q709F0 780 aa8.06□□□□□ -1.12
SCFD1-218ENST00000556256 ETFBKMTQ8IXQ9 262 aa8.06□□□□□ -1.12
SCFD1-218ENST00000556256 FAM200AQ8TCP9 573 aa8.06□□□□□ -1.12
SCFD1-218ENST00000556256 FAM46AQ96IP4 442 aaKnown RBP8.06□□□□□ -1.12
SCFD1-218ENST00000556256 C7orf69Q9H7B7 122 aa8.06□□□□□ -1.12
SCFD1-218ENST00000556256 RNF114Q9Y508 228 aa8.06□□□□□ -1.12
SCFD1-218ENST00000556256 HMX2A2RU54 273 aa8.05□□□□□ -1.12
SCFD1-218ENST00000556256 PRR19A6NJB7 356 aa8.05□□□□□ -1.12
SCFD1-218ENST00000556256 ATP11AP98196 1134 aa8.05□□□□□ -1.12
SCFD1-218ENST00000556256 FKBP5Q13451 457 aaPredicted RBP8.05□□□□□ -1.12
SCFD1-218ENST00000556256 RNF43Q68DV7 783 aa8.05□□□□□ -1.12
SCFD1-218ENST00000556256 KIAA1211Q6ZU35 1233 aa8.05□□□□□ -1.12
SCFD1-218ENST00000556256 OR13H1Q8NG92 308 aa8.05□□□□□ -1.12
SCFD1-218ENST00000556256 UTP4Q969X6 686 aaKnown RBP8.05□□□□□ -1.12
SCFD1-218ENST00000556256 LACRTQ9GZZ8 138 aa8.05□□□□□ -1.12
SCFD1-218ENST00000556256 CDC25BP30305 580 aa8.04□□□□□ -1.12
SCFD1-218ENST00000556256 GRIK1P39086 918 aa8.04□□□□□ -1.12
SCFD1-218ENST00000556256 UVSSAQ2YD98 709 aa8.04□□□□□ -1.12
SCFD1-218ENST00000556256 CEP135Q66GS9 1140 aa8.04□□□□□ -1.12
SCFD1-218ENST00000556256 ADAMTSL4Q6UY14 1074 aa8.04□□□□□ -1.12
SCFD1-218ENST00000556256 CDC27P30260 824 aa8.03□□□□□ -1.12
SCFD1-218ENST00000556256 HYAL2Q12891 473 aa8.03□□□□□ -1.12
SCFD1-218ENST00000556256 FAM26DQ5JW98 314 aa8.03□□□□□ -1.12
SCFD1-218ENST00000556256 DTX1Q86Y01 620 aa8.03□□□□□ -1.12
SCFD1-218ENST00000556256 MYRFLQ96LU7 910 aa8.03□□□□□ -1.12
SCFD1-218ENST00000556256 DBNDD2Q9BQY9 259 aa8.03□□□□□ -1.12
SCFD1-218ENST00000556256 CARD10Q9BWT7 1032 aa8.03□□□□□ -1.12
SCFD1-218ENST00000556256 SAP130Q9H0E3 1048 aa8.03□□□□□ -1.12
SCFD1-218ENST00000556256 ARID1BQ8NFD5 2236 aaPredicted RBP8.03□□□□□ -1.12
SCFD1-218ENST00000556256 UBAP1LF5GYI3 381 aa8.02□□□□□ -1.13
SCFD1-218ENST00000556256 FSCN2O14926 492 aa8.02□□□□□ -1.13
SCFD1-218ENST00000556256 DUOXA2Q1HG44 320 aa8.02□□□□□ -1.13
SCFD1-218ENST00000556256 SPACA7Q96KW9 195 aa8.02□□□□□ -1.13
SCFD1-218ENST00000556256 PRIMPOLQ96LW4 560 aa8.02□□□□□ -1.13
SCFD1-218ENST00000556256 DDX3YO15523 660 aaKnown RBP8.01□□□□□ -1.13
SCFD1-218ENST00000556256 SMNDC1O75940 238 aaKnown RBP eCLIP8.01□□□□□ -1.13
SCFD1-218ENST00000556256 WNT11O96014 354 aa8.01□□□□□ -1.13
SCFD1-218ENST00000556256 BRD2P25440 801 aaKnown RBP8.01□□□□□ -1.13
SCFD1-218ENST00000556256 CLEC10AQ8IUN9 316 aa8.01□□□□□ -1.13
SCFD1-218ENST00000556256 KLHL23Q8NBE8 558 aa8.01□□□□□ -1.13
SCFD1-218ENST00000556256 RASSF4Q9H2L5 321 aa8.01□□□□□ -1.13
SCFD1-218ENST00000556256 A6NJR5 290 aa8□□□□□ -1.13
SCFD1-218ENST00000556256 FAM20CQ8IXL6 584 aa8□□□□□ -1.13
SCFD1-218ENST00000556256 PIK3R5Q8WYR1 880 aa8□□□□□ -1.13
SCFD1-218ENST00000556256 FAM83CQ9BQN1 747 aa8□□□□□ -1.13
SCFD1-218ENST00000556256 SH2B1Q9NRF2 756 aaPredicted RBP8□□□□□ -1.13
SCFD1-218ENST00000556256 ADAM11O75078 769 aa7.99□□□□□ -1.13
SCFD1-218ENST00000556256 SCNN1AP37088 669 aa7.99□□□□□ -1.13
SCFD1-218ENST00000556256 CDCA8Q53HL2 280 aa7.99□□□□□ -1.13
SCFD1-218ENST00000556256 C16orf46Q6P387 395 aa7.99□□□□□ -1.13
SCFD1-218ENST00000556256 FOXD4L4Q8WXT5 416 aaPredicted RBP7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms