RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 DTWD1Q8N5C7 304 aa7.04□□□□□ -1.28
ATXN3-227ENST00000554491 WFDC12Q8WWY7 111 aa7.04□□□□□ -1.28
ATXN3-227ENST00000554491 ZNF777Q9ULD5 760 aaPredicted RBP7.04□□□□□ -1.28
ATXN3-227ENST00000554491 J3QW42 95 aa7.03□□□□□ -1.28
ATXN3-227ENST00000554491 XYLBO75191 536 aa7.03□□□□□ -1.28
ATXN3-227ENST00000554491 EIF2AK2P19525 551 aaKnown RBP7.03□□□□□ -1.28
ATXN3-227ENST00000554491 NOS3P29474 1203 aa7.03□□□□□ -1.28
ATXN3-227ENST00000554491 COX20Q5RI15 118 aa7.03□□□□□ -1.28
ATXN3-227ENST00000554491 TREML1Q86YW5 311 aa7.03□□□□□ -1.28
ATXN3-227ENST00000554491 CMTR1Q8N1G2 835 aaKnown RBP7.03□□□□□ -1.28
ATXN3-227ENST00000554491 TTC9Q92623 222 aa7.03□□□□□ -1.28
ATXN3-227ENST00000554491 PRIMPOLQ96LW4 560 aa7.03□□□□□ -1.28
ATXN3-227ENST00000554491 C11orf16Q9NQ32 467 aa7.03□□□□□ -1.28
ATXN3-227ENST00000554491 TLR7Q9NYK1 1049 aaKnown RBP7.03□□□□□ -1.28
ATXN3-227ENST00000554491 EGFRP00533 1210 aa7.02□□□□□ -1.29
ATXN3-227ENST00000554491 RFX1P22670 979 aa7.02□□□□□ -1.29
ATXN3-227ENST00000554491 NRLP54845 237 aa7.02□□□□□ -1.29
ATXN3-227ENST00000554491 NOVA2Q9UNW9 492 aaKnown RBP7.02□□□□□ -1.29
ATXN3-227ENST00000554491 KCNMB2Q9Y691 235 aa7.02□□□□□ -1.29
ATXN3-227ENST00000554491 TARBP1Q13395 1621 aaKnown RBP7.01□□□□□ -1.29
ATXN3-227ENST00000554491 SYNJ1O43426 1573 aa7.01□□□□□ -1.29
ATXN3-227ENST00000554491 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.01□□□□□ -1.29
ATXN3-227ENST00000554491 PRMT3O60678 531 aa7.01□□□□□ -1.29
ATXN3-227ENST00000554491 MMP20O60882 483 aa7.01□□□□□ -1.29
ATXN3-227ENST00000554491 FAM26DQ5JW98 314 aa7.01□□□□□ -1.29
ATXN3-227ENST00000554491 IGF2-ASQ6U949 168 aa7.01□□□□□ -1.29
ATXN3-227ENST00000554491 PLD4Q96BZ4 506 aa7.01□□□□□ -1.29
ATXN3-227ENST00000554491 MEGF10Q96KG7 1140 aa7.01□□□□□ -1.29
ATXN3-227ENST00000554491 NSUN5Q96P11 429 aaKnown RBP7.01□□□□□ -1.29
ATXN3-227ENST00000554491 KRTAP9-2Q9BYQ4 174 aa7.01□□□□□ -1.29
ATXN3-227ENST00000554491 SAP130Q9H0E3 1048 aa7.01□□□□□ -1.29
ATXN3-227ENST00000554491 TOPBP1Q92547 1522 aa7.01□□□□□ -1.29
ATXN3-227ENST00000554491 DLL1O00548 723 aa7□□□□□ -1.29
ATXN3-227ENST00000554491 ETFBKMTQ8IXQ9 262 aa7□□□□□ -1.29
ATXN3-227ENST00000554491 ZMIZ1Q9ULJ6 1067 aa7□□□□□ -1.29
ATXN3-227ENST00000554491 LOC102724428A0A0B4J2F2 783 aa6.99□□□□□ -1.29
ATXN3-227ENST00000554491 ARID4AP29374 1257 aaPredicted RBP6.99□□□□□ -1.29
ATXN3-227ENST00000554491 SIK1P57059 783 aa6.99□□□□□ -1.29
ATXN3-227ENST00000554491 LRP8Q14114 963 aa6.99□□□□□ -1.29
ATXN3-227ENST00000554491 TRIP4Q15650 581 aaPredicted RBP6.99□□□□□ -1.29
ATXN3-227ENST00000554491 OCLNQ16625 522 aa6.99□□□□□ -1.29
ATXN3-227ENST00000554491 GDF6Q6KF10 455 aaPredicted RBP6.99□□□□□ -1.29
ATXN3-227ENST00000554491 CAPN12Q6ZSI9 719 aa6.99□□□□□ -1.29
ATXN3-227ENST00000554491 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.99□□□□□ -1.29
ATXN3-227ENST00000554491 KRTAP9-6A0A140TA67 174 aa6.98□□□□□ -1.29
ATXN3-227ENST00000554491 HYAL3O43820 417 aaPredicted RBP6.98□□□□□ -1.29
ATXN3-227ENST00000554491 ALX3O95076 343 aa6.98□□□□□ -1.29
ATXN3-227ENST00000554491 PSAPP07602 524 aa6.98□□□□□ -1.29
ATXN3-227ENST00000554491 FAM69CQ0P6D2 419 aa6.98□□□□□ -1.29
ATXN3-227ENST00000554491 IL22RA1Q8N6P7 574 aa6.98□□□□□ -1.29
ATXN3-227ENST00000554491 STK32AQ8WU08 396 aa6.98□□□□□ -1.29
ATXN3-227ENST00000554491 ERCC6L2Q5T890 1561 aa6.98□□□□□ -1.29
ATXN3-227ENST00000554491 DNMBPQ6XZF7 1577 aa6.98□□□□□ -1.29
ATXN3-227ENST00000554491 NBPF11Q86T75 865 aa6.97□□□□□ -1.29
ATXN3-227ENST00000554491 TRIM33Q9UPN9 1127 aa6.97□□□□□ -1.29
ATXN3-227ENST00000554491 AQRO60306 1485 aaKnown RBP eCLIP6.97□□□□□ -1.29
ATXN3-227ENST00000554491 GAPVD1Q14C86 1478 aa6.97□□□□□ -1.29
ATXN3-227ENST00000554491 ACIN1Q9UKV3 1341 aaKnown RBP6.97□□□□□ -1.29
ATXN3-227ENST00000554491 GHRHP01286 108 aa6.96□□□□□ -1.3
ATXN3-227ENST00000554491 SWI5Q1ZZU3 235 aa6.96□□□□□ -1.3
ATXN3-227ENST00000554491 MKNK1Q9BUB5 465 aa6.96□□□□□ -1.3
ATXN3-227ENST00000554491 AKTIPQ9H8T0 292 aa6.96□□□□□ -1.3
ATXN3-227ENST00000554491 WDR97A6NE52 1622 aa6.95□□□□□ -1.3
ATXN3-227ENST00000554491 TNFRSF10BO14763 440 aa6.95□□□□□ -1.3
ATXN3-227ENST00000554491 HOXD8P13378 290 aaPredicted RBP6.95□□□□□ -1.3
ATXN3-227ENST00000554491 SOX18P35713 384 aa6.95□□□□□ -1.3
ATXN3-227ENST00000554491 SETDB1Q15047 1291 aa6.95□□□□□ -1.3
ATXN3-227ENST00000554491 C16orf46Q6P387 395 aa6.95□□□□□ -1.3
ATXN3-227ENST00000554491 BCL11AQ9H165 835 aa6.95□□□□□ -1.3
ATXN3-227ENST00000554491 SNAPC4Q5SXM2 1469 aa6.94□□□□□ -1.3
ATXN3-227ENST00000554491 NAA30Q147X3 362 aaPredicted RBP6.94□□□□□ -1.3
ATXN3-227ENST00000554491 COL13A1Q5TAT6 717 aaPredicted RBP6.94□□□□□ -1.3
ATXN3-227ENST00000554491 PRR23CQ6ZRP0 262 aa6.94□□□□□ -1.3
ATXN3-227ENST00000554491 NLRP13Q86W25 1043 aa6.94□□□□□ -1.3
ATXN3-227ENST00000554491 DZIP1LQ8IYY4 767 aaKnown RBP6.94□□□□□ -1.3
ATXN3-227ENST00000554491 TOP2AP11388 1531 aaKnown RBP6.94□□□□□ -1.3
ATXN3-227ENST00000554491 ABCC8Q09428 1581 aa6.94□□□□□ -1.3
ATXN3-227ENST00000554491 HECW2Q9P2P5 1572 aa6.94□□□□□ -1.3
ATXN3-227ENST00000554491 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.93□□□□□ -1.3
ATXN3-227ENST00000554491 F8W735 103 aaPredicted RBP6.93□□□□□ -1.3
ATXN3-227ENST00000554491 BRD2P25440 801 aaKnown RBP6.93□□□□□ -1.3
ATXN3-227ENST00000554491 AGGF1Q8N302 714 aaeCLIP6.93□□□□□ -1.3
ATXN3-227ENST00000554491 MRPL18Q9H0U6 180 aaKnown RBP6.93□□□□□ -1.3
ATXN3-227ENST00000554491 KDM6BO15054 1643 aa6.92□□□□□ -1.3
ATXN3-227ENST00000554491 UBAP1LF5GYI3 381 aa6.92□□□□□ -1.3
ATXN3-227ENST00000554491 EIF5BO60841 1220 aaKnown RBP6.92□□□□□ -1.3
ATXN3-227ENST00000554491 SRPK2P78362 688 aaKnown RBP6.92□□□□□ -1.3
ATXN3-227ENST00000554491 ATP11AP98196 1134 aa6.92□□□□□ -1.3
ATXN3-227ENST00000554491 ELOAQ14241 798 aaKnown RBP6.92□□□□□ -1.3
ATXN3-227ENST00000554491 ADAMTSL4Q6UY14 1074 aa6.92□□□□□ -1.3
ATXN3-227ENST00000554491 TMEM130Q8N3G9 435 aa6.92□□□□□ -1.3
ATXN3-227ENST00000554491 RBSNQ9H1K0 784 aa6.92□□□□□ -1.3
ATXN3-227ENST00000554491 RNF112Q9ULX5 631 aa6.92□□□□□ -1.3
ATXN3-227ENST00000554491 MAGI1Q96QZ7 1491 aaPredicted RBP6.92□□□□□ -1.3
ATXN3-227ENST00000554491 ZBTB39O15060 712 aa6.91□□□□□ -1.3
ATXN3-227ENST00000554491 GALNT11Q8NCW6 608 aa6.91□□□□□ -1.3
ATXN3-227ENST00000554491 OR13H1Q8NG92 308 aa6.91□□□□□ -1.3
ATXN3-227ENST00000554491 PIK3R5Q8WYR1 880 aa6.91□□□□□ -1.3
ATXN3-227ENST00000554491 COL26A1Q96A83 441 aa6.91□□□□□ -1.3
ATXN3-227ENST00000554491 CXXC1Q9P0U4 656 aaPredicted RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms