RNA–Protein interactions for RNA: ENST00000545354.1

UBE4A-203, Transcript of ubiquitination factor E4A, humanhuman

TSL 2 BASIC

Gene UBE4A, Length 2,149 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-203ENST00000545354 FOXK1P85037 733 aa5.95□□□□□ -1.46
UBE4A-203ENST00000545354 PTPROQ16827 1216 aa5.95□□□□□ -1.46
UBE4A-203ENST00000545354 CCDC184Q52MB2 194 aa5.95□□□□□ -1.46
UBE4A-203ENST00000545354 CCDC122Q5T0U0 273 aa5.95□□□□□ -1.46
UBE4A-203ENST00000545354 NUTM2GQ5VZR2 741 aa5.95□□□□□ -1.46
UBE4A-203ENST00000545354 GBP7Q8N8V2 638 aaPredicted RBP5.95□□□□□ -1.46
UBE4A-203ENST00000545354 TRIML1Q8N9V2 468 aa5.95□□□□□ -1.46
UBE4A-203ENST00000545354 GOLGA5Q8TBA6 731 aa5.95□□□□□ -1.46
UBE4A-203ENST00000545354 TRIM52Q96A61 297 aa5.95□□□□□ -1.46
UBE4A-203ENST00000545354 RUNDC1Q96C34 613 aa5.95□□□□□ -1.46
UBE4A-203ENST00000545354 DDX11Q96FC9 970 aa5.95□□□□□ -1.46
UBE4A-203ENST00000545354 VMP1Q96GC9 406 aa5.95□□□□□ -1.46
UBE4A-203ENST00000545354 FAXDC2Q96IV6 333 aa5.95□□□□□ -1.46
UBE4A-203ENST00000545354 DHRS1Q96LJ7 313 aa5.95□□□□□ -1.46
UBE4A-203ENST00000545354 NACA2Q9H009 215 aa5.95□□□□□ -1.46
UBE4A-203ENST00000545354 GPCPD1Q9NPB8 672 aa5.95□□□□□ -1.46
UBE4A-203ENST00000545354 TMEM98Q9Y2Y6 226 aa5.95□□□□□ -1.46
UBE4A-203ENST00000545354 RNF123Q5XPI4 1314 aa5.95□□□□□ -1.46
UBE4A-203ENST00000545354 GOLGA6L10A0A0M3HER8 536 aa5.95□□□□□ -1.46
UBE4A-203ENST00000545354 HOXA2O43364 376 aa5.95□□□□□ -1.46
UBE4A-203ENST00000545354 MYO1BO43795 1136 aa5.95□□□□□ -1.46
UBE4A-203ENST00000545354 ZBED4O75132 1171 aa5.95□□□□□ -1.46
UBE4A-203ENST00000545354 SLC34A2O95436 690 aa5.95□□□□□ -1.46
UBE4A-203ENST00000545354 MMEP08473 750 aa5.95□□□□□ -1.46
UBE4A-203ENST00000545354 CCNCP24863 283 aa5.95□□□□□ -1.46
UBE4A-203ENST00000545354 ERCC5P28715 1186 aaPredicted RBP5.95□□□□□ -1.46
UBE4A-203ENST00000545354 HOXA10P31260 410 aaPredicted RBP5.95□□□□□ -1.46
UBE4A-203ENST00000545354 MCM4P33991 863 aa5.95□□□□□ -1.46
UBE4A-203ENST00000545354 PIK3CAP42336 1068 aa5.95□□□□□ -1.46
UBE4A-203ENST00000545354 COX10Q12887 443 aa5.95□□□□□ -1.46
UBE4A-203ENST00000545354 EIF4A2Q14240 407 aaKnown RBP5.95□□□□□ -1.46
UBE4A-203ENST00000545354 MUM1Q2TAK8 710 aa5.95□□□□□ -1.46
UBE4A-203ENST00000545354 PREPLQ4J6C6 727 aaPredicted RBP5.95□□□□□ -1.46
UBE4A-203ENST00000545354 NAIF1Q69YI7 327 aaPredicted RBP5.95□□□□□ -1.46
UBE4A-203ENST00000545354 SRLQ86TD4 932 aa5.95□□□□□ -1.46
UBE4A-203ENST00000545354 RSPH3Q86UC2 560 aa5.95□□□□□ -1.46
UBE4A-203ENST00000545354 DZIP1Q86YF9 867 aaKnown RBP5.95□□□□□ -1.46
UBE4A-203ENST00000545354 ERC1Q8IUD2 1116 aa5.95□□□□□ -1.46
UBE4A-203ENST00000545354 C10orf67Q8IYJ2 551 aa5.95□□□□□ -1.46
UBE4A-203ENST00000545354 SAMD14Q8IZD0 417 aaPredicted RBP5.95□□□□□ -1.46
UBE4A-203ENST00000545354 IQUBQ8NA54 791 aa5.95□□□□□ -1.46
UBE4A-203ENST00000545354 ZNF483Q8TF39 744 aaPredicted RBP5.95□□□□□ -1.46
UBE4A-203ENST00000545354 FRS2Q8WU20 508 aa5.95□□□□□ -1.46
UBE4A-203ENST00000545354 TEKT4Q8WW24 435 aa5.95□□□□□ -1.46
UBE4A-203ENST00000545354 TRIM11Q96F44 468 aa5.95□□□□□ -1.46
UBE4A-203ENST00000545354 NAF1Q96HR8 494 aaKnown RBP5.95□□□□□ -1.46
UBE4A-203ENST00000545354 SCLT1Q96NL6 688 aa5.95□□□□□ -1.46
UBE4A-203ENST00000545354 CRISPLD2Q9H0B8 497 aa5.95□□□□□ -1.46
UBE4A-203ENST00000545354 PIK3R4Q99570 1358 aa5.94□□□□□ -1.46
UBE4A-203ENST00000545354 CTIFO43310 598 aaKnown RBP5.94□□□□□ -1.46
UBE4A-203ENST00000545354 FMNL1O95466 1100 aaPredicted RBP5.94□□□□□ -1.46
UBE4A-203ENST00000545354 EMP3P54852 163 aa5.94□□□□□ -1.46
UBE4A-203ENST00000545354 RBM6P78332 1123 aaKnown RBP5.94□□□□□ -1.46
UBE4A-203ENST00000545354 FAM160A1Q05DH4 1040 aa5.94□□□□□ -1.46
UBE4A-203ENST00000545354 BIRC3Q13489 604 aa5.94□□□□□ -1.46
UBE4A-203ENST00000545354 SAFB2Q14151 953 aaKnown RBP eCLIP5.94□□□□□ -1.46
UBE4A-203ENST00000545354 IQCB1Q15051 598 aa5.94□□□□□ -1.46
UBE4A-203ENST00000545354 KIF4BQ2VIQ3 1234 aa5.94□□□□□ -1.46
UBE4A-203ENST00000545354 SND1Q7KZF4 910 aaKnown RBP eCLIP5.94□□□□□ -1.46
UBE4A-203ENST00000545354 RNF168Q8IYW5 571 aaPredicted RBP5.94□□□□□ -1.46
UBE4A-203ENST00000545354 ARL6IP6Q8N6S5 226 aa5.94□□□□□ -1.46
UBE4A-203ENST00000545354 PAF1Q8N7H5 531 aa5.94□□□□□ -1.46
UBE4A-203ENST00000545354 ATRIPQ8WXE1 791 aa5.94□□□□□ -1.46
UBE4A-203ENST00000545354 RNPC3Q96LT9 517 aaKnown RBP5.94□□□□□ -1.46
UBE4A-203ENST00000545354 MAP3K14Q99558 947 aa5.94□□□□□ -1.46
UBE4A-203ENST00000545354 IFT57Q9NWB7 429 aa5.94□□□□□ -1.46
UBE4A-203ENST00000545354 MYO6Q9UM54 1294 aa5.94□□□□□ -1.46
UBE4A-203ENST00000545354 PLEKHG2Q9H7P9 1386 aa5.94□□□□□ -1.46
UBE4A-203ENST00000545354 PDLIM1O00151 329 aa5.93□□□□□ -1.46
UBE4A-203ENST00000545354 CHL1O00533 1208 aa5.93□□□□□ -1.46
UBE4A-203ENST00000545354 ERC2O15083 957 aa5.93□□□□□ -1.46
UBE4A-203ENST00000545354 OPA1O60313 960 aa5.93□□□□□ -1.46
UBE4A-203ENST00000545354 BBOX1O75936 387 aa5.93□□□□□ -1.46
UBE4A-203ENST00000545354 PSME1Q06323 249 aa5.93□□□□□ -1.46
UBE4A-203ENST00000545354 DSG2Q14126 1118 aa5.93□□□□□ -1.46
UBE4A-203ENST00000545354 MAPRE1Q15691 268 aaKnown RBP5.93□□□□□ -1.46
UBE4A-203ENST00000545354 NFE2L2Q16236 605 aa5.93□□□□□ -1.46
UBE4A-203ENST00000545354 GBP6Q6ZN66 633 aa5.93□□□□□ -1.46
UBE4A-203ENST00000545354 SPATA21Q7Z572 469 aa5.93□□□□□ -1.46
UBE4A-203ENST00000545354 ATP11CQ8NB49 1132 aa5.93□□□□□ -1.46
UBE4A-203ENST00000545354 GABPB2Q8TAK5 448 aaPredicted RBP5.93□□□□□ -1.46
UBE4A-203ENST00000545354 PIBF1Q8WXW3 757 aa5.93□□□□□ -1.46
UBE4A-203ENST00000545354 KCNB2Q92953 911 aa5.93□□□□□ -1.46
UBE4A-203ENST00000545354 GPATCH3Q96I76 525 aa5.93□□□□□ -1.46
UBE4A-203ENST00000545354 RUFY1Q96T51 708 aa5.93□□□□□ -1.46
UBE4A-203ENST00000545354 SLKQ9H2G2 1235 aaPredicted RBP5.93□□□□□ -1.46
UBE4A-203ENST00000545354 POLKQ9UBT6 870 aa5.93□□□□□ -1.46
UBE4A-203ENST00000545354 CTNNA3Q9UI47 895 aa5.93□□□□□ -1.46
UBE4A-203ENST00000545354 DIS3Q9Y2L1 958 aaKnown RBP5.93□□□□□ -1.46
UBE4A-203ENST00000545354 NPC1L1Q9UHC9 1359 aa5.93□□□□□ -1.46
UBE4A-203ENST00000545354 SOS1Q07889 1333 aaPredicted RBP5.93□□□□□ -1.46
UBE4A-203ENST00000545354 EVC2Q86UK5 1308 aa5.93□□□□□ -1.46
UBE4A-203ENST00000545354 NCKAP5LQ9HCH0 1330 aa5.93□□□□□ -1.46
UBE4A-203ENST00000545354 GAPVD1Q14C86 1478 aa5.93□□□□□ -1.46
UBE4A-203ENST00000545354 H7C1W4 665 aa5.93□□□□□ -1.46
UBE4A-203ENST00000545354 TGFB3P10600 412 aa5.93□□□□□ -1.46
UBE4A-203ENST00000545354 NEK2P51955 445 aa5.93□□□□□ -1.46
UBE4A-203ENST00000545354 PKN1Q16512 942 aa5.93□□□□□ -1.46
UBE4A-203ENST00000545354 FXNQ16595 210 aa5.93□□□□□ -1.46
UBE4A-203ENST00000545354 SFMBT2Q5VUG0 894 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms