RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 SCAND2PQ9GZW5 306 aaPredicted RBP18.05■□□□□ 0.48
CNOT9-208ENST00000542068 ZSCAN25Q6NSZ9 544 aa18.05■□□□□ 0.48
CNOT9-208ENST00000542068 GOLIM4O00461 696 aa18.04■□□□□ 0.48
CNOT9-208ENST00000542068 EVA1CP58658 441 aa18.04■□□□□ 0.48
CNOT9-208ENST00000542068 FMNL2Q96PY5 1086 aa18.04■□□□□ 0.48
CNOT9-208ENST00000542068 BECN2A8MW95 431 aa18.04■□□□□ 0.48
CNOT9-208ENST00000542068 FKBP4Q02790 459 aaKnown RBP eCLIP18.04■□□□□ 0.48
CNOT9-208ENST00000542068 SLIT1O75093 1534 aa18.04■□□□□ 0.48
CNOT9-208ENST00000542068 CYP27B1O15528 508 aa18.03■□□□□ 0.48
CNOT9-208ENST00000542068 TPM3P06753 285 aa18.03■□□□□ 0.48
CNOT9-208ENST00000542068 GTF2F1P35269 517 aaKnown RBP eCLIP18.03■□□□□ 0.48
CNOT9-208ENST00000542068 HSP90AB3PQ58FF7 597 aa18.03■□□□□ 0.48
CNOT9-208ENST00000542068 TAF7LQ5H9L4 462 aa18.03■□□□□ 0.48
CNOT9-208ENST00000542068 CLSTN2Q9H4D0 955 aa18.03■□□□□ 0.48
CNOT9-208ENST00000542068 PDIA6Q15084 440 aa18.03■□□□□ 0.48
CNOT9-208ENST00000542068 TTLL7Q6ZT98 887 aa18.03■□□□□ 0.48
CNOT9-208ENST00000542068 C11orf57Q6ZUT1 292 aaPredicted RBP18.03■□□□□ 0.48
CNOT9-208ENST00000542068 RAB11FIP4Q86YS3 637 aa18.03■□□□□ 0.48
CNOT9-208ENST00000542068 NCOA5Q9HCD5 579 aaKnown RBP18.03■□□□□ 0.48
CNOT9-208ENST00000542068 USP27XA6NNY8 438 aa18.02■□□□□ 0.48
CNOT9-208ENST00000542068 CCDC112Q8NEF3 446 aa18.02■□□□□ 0.48
CNOT9-208ENST00000542068 METTL22Q9BUU2 404 aaPredicted RBP18.02■□□□□ 0.48
CNOT9-208ENST00000542068 XRN1Q8IZH2 1706 aaKnown RBP18.02■□□□□ 0.48
CNOT9-208ENST00000542068 DMTNQ08495 405 aa18.02■□□□□ 0.47
CNOT9-208ENST00000542068 DBNLQ9UJU6 430 aaKnown RBP18.02■□□□□ 0.47
CNOT9-208ENST00000542068 ANKRD1Q15327 319 aa18.01■□□□□ 0.47
CNOT9-208ENST00000542068 NEK1Q96PY6 1258 aa18.01■□□□□ 0.47
CNOT9-208ENST00000542068 DDX19AQ9NUU7 478 aaKnown RBP18.01■□□□□ 0.47
CNOT9-208ENST00000542068 NCBP1Q09161 790 aaKnown RBP18.01■□□□□ 0.47
CNOT9-208ENST00000542068 CCAR1Q8IX12 1150 aaKnown RBP18.01■□□□□ 0.47
CNOT9-208ENST00000542068 ADGRL3Q9HAR2 1447 aa18.01■□□□□ 0.47
CNOT9-208ENST00000542068 HIP1O00291 1037 aa18■□□□□ 0.47
CNOT9-208ENST00000542068 TAF5LO75529 589 aa18■□□□□ 0.47
CNOT9-208ENST00000542068 APOBRQ0VD83 1088 aa18■□□□□ 0.47
CNOT9-208ENST00000542068 WASHC4Q2M389 1173 aa18■□□□□ 0.47
CNOT9-208ENST00000542068 ZNF771Q7L3S4 317 aaPredicted RBP18■□□□□ 0.47
CNOT9-208ENST00000542068 TOPAZ1Q8N9V7 1692 aa18■□□□□ 0.47
CNOT9-208ENST00000542068 RGPD1P0DJD0 1748 aa18■□□□□ 0.47
CNOT9-208ENST00000542068 A0A0G2JLW4 131 aa17.99■□□□□ 0.47
CNOT9-208ENST00000542068 ME1P48163 572 aa17.99■□□□□ 0.47
CNOT9-208ENST00000542068 USP42Q9H9J4 1324 aaKnown RBP17.99■□□□□ 0.47
CNOT9-208ENST00000542068 NPHP4O75161 1426 aaPredicted RBP17.99■□□□□ 0.47
CNOT9-208ENST00000542068 OTUD7BQ6GQQ9 843 aa17.99■□□□□ 0.47
CNOT9-208ENST00000542068 FER1L4A9Z1Z3 1794 aa17.99■□□□□ 0.47
CNOT9-208ENST00000542068 NWD1Q149M9 1564 aa17.99■□□□□ 0.47
CNOT9-208ENST00000542068 A0A0U1RQG5 324 aaPredicted RBP17.99■□□□□ 0.47
CNOT9-208ENST00000542068 GPTP24298 496 aa17.99■□□□□ 0.47
CNOT9-208ENST00000542068 TNNI3KQ59H18 835 aa17.99■□□□□ 0.47
CNOT9-208ENST00000542068 ISM2Q6H9L7 571 aa17.99■□□□□ 0.47
CNOT9-208ENST00000542068 FPGT-TNNI3KV9GXZ4 949 aa17.99■□□□□ 0.47
CNOT9-208ENST00000542068 HAND2P61296 217 aa17.98■□□□□ 0.47
CNOT9-208ENST00000542068 FMN2Q9NZ56 1722 aa17.98■□□□□ 0.47
CNOT9-208ENST00000542068 BIN1O00499 593 aa17.98■□□□□ 0.47
CNOT9-208ENST00000542068 SCRN1Q12765 414 aa17.97■□□□□ 0.47
CNOT9-208ENST00000542068 CEP135Q66GS9 1140 aa17.97■□□□□ 0.47
CNOT9-208ENST00000542068 DCAF5Q96JK2 942 aa17.97■□□□□ 0.47
CNOT9-208ENST00000542068 TMEM94Q12767 1356 aa17.97■□□□□ 0.47
CNOT9-208ENST00000542068 FAM208AQ9UK61 1670 aaKnown RBP17.97■□□□□ 0.47
CNOT9-208ENST00000542068 SKILP12757 684 aa17.97■□□□□ 0.47
CNOT9-208ENST00000542068 MTX1Q13505 466 aa17.97■□□□□ 0.47
CNOT9-208ENST00000542068 GTF3C6Q969F1 213 aa17.97■□□□□ 0.47
CNOT9-208ENST00000542068 TUBGCP6Q96RT7 1819 aa17.97■□□□□ 0.47
CNOT9-208ENST00000542068 CYP21A2P08686 494 aa17.97■□□□□ 0.47
CNOT9-208ENST00000542068 CCDC73Q6ZRK6 1079 aa17.97■□□□□ 0.47
CNOT9-208ENST00000542068 PTPN12Q05209 780 aaKnown RBP17.96■□□□□ 0.47
CNOT9-208ENST00000542068 RESTQ13127 1097 aa17.96■□□□□ 0.47
CNOT9-208ENST00000542068 PLA2G4DQ86XP0 818 aa17.96■□□□□ 0.47
CNOT9-208ENST00000542068 GOLPH3LQ9H4A5 285 aa17.96■□□□□ 0.47
CNOT9-208ENST00000542068 ELP1O95163 1332 aa17.96■□□□□ 0.47
CNOT9-208ENST00000542068 KCNB2Q92953 911 aa17.96■□□□□ 0.47
CNOT9-208ENST00000542068 SDF4Q9BRK5 362 aa17.96■□□□□ 0.47
CNOT9-208ENST00000542068 NALCNQ8IZF0 1738 aa17.96■□□□□ 0.46
CNOT9-208ENST00000542068 KINO60870 393 aaKnown RBP17.96■□□□□ 0.46
CNOT9-208ENST00000542068 LRRC24Q50LG9 513 aa17.96■□□□□ 0.46
CNOT9-208ENST00000542068 AOPEPQ8N6M6 819 aa17.96■□□□□ 0.46
CNOT9-208ENST00000542068 USP28Q96RU2 1077 aa17.96■□□□□ 0.46
CNOT9-208ENST00000542068 PXDNLA1KZ92 1463 aa17.95■□□□□ 0.46
CNOT9-208ENST00000542068 FSIP1Q8NA03 581 aa17.95■□□□□ 0.46
CNOT9-208ENST00000542068 TDRD7Q8NHU6 1098 aaKnown RBP17.95■□□□□ 0.46
CNOT9-208ENST00000542068 STK11IPQ8N1F8 1099 aa17.95■□□□□ 0.46
CNOT9-208ENST00000542068 ANKRD7Q92527 254 aa17.95■□□□□ 0.46
CNOT9-208ENST00000542068 CCDC69A6NI79 296 aa17.94■□□□□ 0.46
CNOT9-208ENST00000542068 SMTNL1A8MU46 457 aa17.94■□□□□ 0.46
CNOT9-208ENST00000542068 PUS3Q9BZE2 481 aaKnown RBP17.94■□□□□ 0.46
CNOT9-208ENST00000542068 GPHNQ9NQX3 736 aaPredicted RBP17.94■□□□□ 0.46
CNOT9-208ENST00000542068 A0A1B0GVL5 298 aa17.94■□□□□ 0.46
CNOT9-208ENST00000542068 POLR3DP05423 398 aaPredicted RBP17.94■□□□□ 0.46
CNOT9-208ENST00000542068 PTPN14Q15678 1187 aa17.94■□□□□ 0.46
CNOT9-208ENST00000542068 FAM89AQ96GI7 184 aa17.94■□□□□ 0.46
CNOT9-208ENST00000542068 CFAP45Q9UL16 551 aa17.94■□□□□ 0.46
CNOT9-208ENST00000542068 COL15A1P39059 1388 aa17.94■□□□□ 0.46
CNOT9-208ENST00000542068 PTPDC1A2A3K4 754 aa17.94■□□□□ 0.46
CNOT9-208ENST00000542068 ZRSR1Q15695 479 aaKnown RBP17.94■□□□□ 0.46
CNOT9-208ENST00000542068 PTPN21Q16825 1174 aa17.94■□□□□ 0.46
CNOT9-208ENST00000542068 STOX1Q6ZVD7 989 aa17.94■□□□□ 0.46
CNOT9-208ENST00000542068 ZCRB1Q8TBF4 217 aaKnown RBP17.94■□□□□ 0.46
CNOT9-208ENST00000542068 ZNF215Q9UL58 517 aaPredicted RBP17.94■□□□□ 0.46
CNOT9-208ENST00000542068 SMC2O95347 1197 aa17.93■□□□□ 0.46
CNOT9-208ENST00000542068 IFIT1P09914 478 aaKnown RBP17.93■□□□□ 0.46
CNOT9-208ENST00000542068 SF3A1Q15459 793 aaKnown RBP17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms