RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 ADAMTSL3P82987 1691 aa16.68■□□□□ 0.26
UBE3B-210ENST00000539599 NR1I2O75469 434 aa16.68■□□□□ 0.26
UBE3B-210ENST00000539599 GTF3C6Q969F1 213 aa16.68■□□□□ 0.26
UBE3B-210ENST00000539599 DNTTIP2Q5QJE6 756 aaKnown RBP16.67■□□□□ 0.26
UBE3B-210ENST00000539599 LEO1Q8WVC0 666 aaPredicted RBP16.67■□□□□ 0.26
UBE3B-210ENST00000539599 COL18A1P39060 1754 aa16.67■□□□□ 0.26
UBE3B-210ENST00000539599 MRC1P22897 1456 aa16.67■□□□□ 0.26
UBE3B-210ENST00000539599 ADORA1P30542 326 aa16.67■□□□□ 0.26
UBE3B-210ENST00000539599 HAND2P61296 217 aa16.67■□□□□ 0.26
UBE3B-210ENST00000539599 USPL1Q5W0Q7 1092 aa16.67■□□□□ 0.26
UBE3B-210ENST00000539599 ERCC4Q92889 916 aaPredicted RBP16.67■□□□□ 0.26
UBE3B-210ENST00000539599 PAG1Q9NWQ8 432 aa16.67■□□□□ 0.26
UBE3B-210ENST00000539599 JCADQ9P266 1359 aa16.67■□□□□ 0.26
UBE3B-210ENST00000539599 TPM2P07951 284 aa16.66■□□□□ 0.26
UBE3B-210ENST00000539599 FKBP4Q02790 459 aaKnown RBP eCLIP16.66■□□□□ 0.26
UBE3B-210ENST00000539599 PRDM11Q9NQV5 511 aa16.66■□□□□ 0.26
UBE3B-210ENST00000539599 STRCP1A6NGW2 1772 aa16.66■□□□□ 0.26
UBE3B-210ENST00000539599 KIAA2012Q0VF49 1180 aa16.66■□□□□ 0.26
UBE3B-210ENST00000539599 KBTBD3Q8NAB2 608 aa16.66■□□□□ 0.26
UBE3B-210ENST00000539599 NUP62CLQ9H1M0 184 aa16.66■□□□□ 0.26
UBE3B-210ENST00000539599 MRVI1Q9Y6F6 885 aa16.66■□□□□ 0.26
UBE3B-210ENST00000539599 GLI3P10071 1580 aa16.66■□□□□ 0.26
UBE3B-210ENST00000539599 M0R2C6 588 aa16.66■□□□□ 0.26
UBE3B-210ENST00000539599 BICD2Q8TD16 824 aa16.66■□□□□ 0.26
UBE3B-210ENST00000539599 KCNF1Q9H3M0 494 aa16.66■□□□□ 0.26
UBE3B-210ENST00000539599 PYCARDQ9ULZ3 195 aa16.66■□□□□ 0.26
UBE3B-210ENST00000539599 A0A1B0GUL7 405 aa16.65■□□□□ 0.26
UBE3B-210ENST00000539599 H7C1W4 665 aa16.65■□□□□ 0.26
UBE3B-210ENST00000539599 CTDNEP1O95476 244 aa16.65■□□□□ 0.26
UBE3B-210ENST00000539599 FAM184AQ8NB25 1140 aa16.65■□□□□ 0.26
UBE3B-210ENST00000539599 FBXW7Q969H0 707 aa16.65■□□□□ 0.26
UBE3B-210ENST00000539599 CWC25Q9NXE8 425 aaPredicted RBP16.65■□□□□ 0.26
UBE3B-210ENST00000539599 GOLGA6L4A6NEF3 574 aa16.65■□□□□ 0.26
UBE3B-210ENST00000539599 H3BQV1 296 aa16.65■□□□□ 0.26
UBE3B-210ENST00000539599 TYRO3Q06418 890 aa16.65■□□□□ 0.26
UBE3B-210ENST00000539599 SCARF1Q14162 830 aa16.65■□□□□ 0.26
UBE3B-210ENST00000539599 ANKRD1Q15327 319 aa16.65■□□□□ 0.26
UBE3B-210ENST00000539599 IFFO2Q5TF58 517 aa16.65■□□□□ 0.26
UBE3B-210ENST00000539599 OTUD7BQ6GQQ9 843 aa16.65■□□□□ 0.26
UBE3B-210ENST00000539599 FAM89AQ96GI7 184 aa16.65■□□□□ 0.26
UBE3B-210ENST00000539599 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.65■□□□□ 0.26
UBE3B-210ENST00000539599 HMG20BQ9P0W2 317 aa16.65■□□□□ 0.26
UBE3B-210ENST00000539599 ANO6Q4KMQ2 910 aa16.64■□□□□ 0.25
UBE3B-210ENST00000539599 ZCRB1Q8TBF4 217 aaKnown RBP16.64■□□□□ 0.25
UBE3B-210ENST00000539599 SPATA31A3Q5VYP0 1347 aa16.64■□□□□ 0.25
UBE3B-210ENST00000539599 MAST3O60307 1309 aa16.64■□□□□ 0.25
UBE3B-210ENST00000539599 RESTQ13127 1097 aa16.64■□□□□ 0.25
UBE3B-210ENST00000539599 TNS3Q68CZ2 1445 aa16.64■□□□□ 0.25
UBE3B-210ENST00000539599 TNMDQ9H2S6 317 aa16.64■□□□□ 0.25
UBE3B-210ENST00000539599 GJB4Q9NTQ9 266 aa16.64■□□□□ 0.25
UBE3B-210ENST00000539599 IFIT1P09914 478 aaKnown RBP16.63■□□□□ 0.25
UBE3B-210ENST00000539599 MAP3K11Q16584 847 aa16.63■□□□□ 0.25
UBE3B-210ENST00000539599 HSPD1P10809 573 aaKnown RBP16.63■□□□□ 0.25
UBE3B-210ENST00000539599 UVSSAQ2YD98 709 aa16.63■□□□□ 0.25
UBE3B-210ENST00000539599 TSGA10IPQ3SY00 556 aa16.63■□□□□ 0.25
UBE3B-210ENST00000539599 OSBP2Q969R2 916 aa16.63■□□□□ 0.25
UBE3B-210ENST00000539599 NRBP1Q9UHY1 535 aa16.63■□□□□ 0.25
UBE3B-210ENST00000539599 DENND2AQ9ULE3 1009 aa16.63■□□□□ 0.25
UBE3B-210ENST00000539599 U3KPZ7 1027 aaPredicted RBP16.63■□□□□ 0.25
UBE3B-210ENST00000539599 KIF1AQ12756 1690 aa16.63■□□□□ 0.25
UBE3B-210ENST00000539599 CCDC192P0DO97 292 aa16.62■□□□□ 0.25
UBE3B-210ENST00000539599 PDCP20941 246 aa16.62■□□□□ 0.25
UBE3B-210ENST00000539599 CSPP1Q1MSJ5 1256 aa16.62■□□□□ 0.25
UBE3B-210ENST00000539599 DNAJC25Q9H1X3 360 aa16.62■□□□□ 0.25
UBE3B-210ENST00000539599 KAT6BQ8WYB5 2073 aa16.62■□□□□ 0.25
UBE3B-210ENST00000539599 LETM1O95202 739 aaPredicted RBP16.62■□□□□ 0.25
UBE3B-210ENST00000539599 GPTP24298 496 aa16.62■□□□□ 0.25
UBE3B-210ENST00000539599 NOLC1Q14978 699 aaKnown RBP eCLIP16.62■□□□□ 0.25
UBE3B-210ENST00000539599 NKX2-3Q8TAU0 364 aa16.62■□□□□ 0.25
UBE3B-210ENST00000539599 PTPDC1A2A3K4 754 aa16.61■□□□□ 0.25
UBE3B-210ENST00000539599 E7EWF7 191 aa16.61■□□□□ 0.25
UBE3B-210ENST00000539599 NSUN7Q8NE18 718 aaKnown RBP16.61■□□□□ 0.25
UBE3B-210ENST00000539599 BCL11BQ9C0K0 894 aaPredicted RBP16.61■□□□□ 0.25
UBE3B-210ENST00000539599 CBX8Q9HC52 389 aa16.61■□□□□ 0.25
UBE3B-210ENST00000539599 EYA2O00167 538 aa16.61■□□□□ 0.25
UBE3B-210ENST00000539599 BRINP3Q76B58 766 aa16.61■□□□□ 0.25
UBE3B-210ENST00000539599 RRP9O43818 475 aaKnown RBP16.6■□□□□ 0.25
UBE3B-210ENST00000539599 PTGS1P23219 599 aa16.6■□□□□ 0.25
UBE3B-210ENST00000539599 LRMPQ12912 555 aa16.6■□□□□ 0.25
UBE3B-210ENST00000539599 MCM5P33992 734 aa16.6■□□□□ 0.25
UBE3B-210ENST00000539599 KRT32Q14532 448 aa16.6■□□□□ 0.25
UBE3B-210ENST00000539599 WASHC4Q2M389 1173 aa16.6■□□□□ 0.25
UBE3B-210ENST00000539599 ASAP1Q9ULH1 1129 aa16.6■□□□□ 0.25
UBE3B-210ENST00000539599 PIBF1Q8WXW3 757 aa16.6■□□□□ 0.25
UBE3B-210ENST00000539599 GOLPH3LQ9H4A5 285 aa16.6■□□□□ 0.25
UBE3B-210ENST00000539599 LAMA4Q16363 1823 aa16.6■□□□□ 0.25
UBE3B-210ENST00000539599 FOXP2O15409 715 aa16.59■□□□□ 0.25
UBE3B-210ENST00000539599 ZMYM1Q5SVZ6 1142 aa16.59■□□□□ 0.25
UBE3B-210ENST00000539599 DHX32Q7L7V1 743 aaKnown RBP16.59■□□□□ 0.25
UBE3B-210ENST00000539599 PALLDQ8WX93 1383 aa16.59■□□□□ 0.25
UBE3B-210ENST00000539599 SH3TC1Q8TE82 1336 aa16.59■□□□□ 0.25
UBE3B-210ENST00000539599 FAM200AQ8TCP9 573 aa16.59■□□□□ 0.25
UBE3B-210ENST00000539599 UBE2Q2Q8WVN8 375 aa16.59■□□□□ 0.25
UBE3B-210ENST00000539599 USP28Q96RU2 1077 aa16.59■□□□□ 0.25
UBE3B-210ENST00000539599 SCAND2PQ9GZW5 306 aaPredicted RBP16.59■□□□□ 0.25
UBE3B-210ENST00000539599 ADD1P35611 737 aaKnown RBP16.58■□□□□ 0.25
UBE3B-210ENST00000539599 IL15P40933 162 aaPredicted RBP16.58■□□□□ 0.25
UBE3B-210ENST00000539599 CADPS2Q86UW7 1296 aa16.58■□□□□ 0.25
UBE3B-210ENST00000539599 DNAJC10Q8IXB1 793 aa16.58■□□□□ 0.25
UBE3B-210ENST00000539599 ALDH8A1Q9H2A2 487 aaPredicted RBP16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms