RNA–Protein interactions for RNA: ENST00000532881.5

SSH3-210, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 1 (best)

Gene SSH3, Length 2,587 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-210ENST00000532881 FAM184AQ8NB25 1140 aa17.65■□□□□ 0.42
SSH3-210ENST00000532881 GTF3C6Q969F1 213 aa17.65■□□□□ 0.42
SSH3-210ENST00000532881 ZNF142P52746 1687 aaPredicted RBP17.65■□□□□ 0.42
SSH3-210ENST00000532881 TOM1L2Q6ZVM7 507 aa17.65■□□□□ 0.42
SSH3-210ENST00000532881 MRVI1Q9Y6F6 885 aa17.65■□□□□ 0.42
SSH3-210ENST00000532881 MST1RQ04912 1400 aa17.65■□□□□ 0.42
SSH3-210ENST00000532881 NUP62CLQ9H1M0 184 aa17.64■□□□□ 0.41
SSH3-210ENST00000532881 GOLGA6L4A6NEF3 574 aa17.64■□□□□ 0.41
SSH3-210ENST00000532881 FKBP4Q02790 459 aaKnown RBP eCLIP17.64■□□□□ 0.41
SSH3-210ENST00000532881 ANKRD1Q15327 319 aa17.64■□□□□ 0.41
SSH3-210ENST00000532881 UVSSAQ2YD98 709 aa17.64■□□□□ 0.41
SSH3-210ENST00000532881 ERCC4Q92889 916 aaPredicted RBP17.64■□□□□ 0.41
SSH3-210ENST00000532881 KCNF1Q9H3M0 494 aa17.64■□□□□ 0.41
SSH3-210ENST00000532881 PAG1Q9NWQ8 432 aa17.64■□□□□ 0.41
SSH3-210ENST00000532881 LETM1O95202 739 aaPredicted RBP17.63■□□□□ 0.41
SSH3-210ENST00000532881 HAND2P61296 217 aa17.63■□□□□ 0.41
SSH3-210ENST00000532881 PI16Q6UXB8 463 aa17.63■□□□□ 0.41
SSH3-210ENST00000532881 KBTBD3Q8NAB2 608 aa17.63■□□□□ 0.41
SSH3-210ENST00000532881 STRN4Q9NRL3 753 aa17.63■□□□□ 0.41
SSH3-210ENST00000532881 PYCARDQ9ULZ3 195 aa17.63■□□□□ 0.41
SSH3-210ENST00000532881 ALS2Q96Q42 1657 aa17.63■□□□□ 0.41
SSH3-210ENST00000532881 H3BQV1 296 aa17.63■□□□□ 0.41
SSH3-210ENST00000532881 H7C1W4 665 aa17.63■□□□□ 0.41
SSH3-210ENST00000532881 RRP9O43818 475 aaKnown RBP17.63■□□□□ 0.41
SSH3-210ENST00000532881 CTDNEP1O95476 244 aa17.63■□□□□ 0.41
SSH3-210ENST00000532881 ADORA1P30542 326 aa17.63■□□□□ 0.41
SSH3-210ENST00000532881 TYRO3Q06418 890 aa17.63■□□□□ 0.41
SSH3-210ENST00000532881 ANO6Q4KMQ2 910 aa17.63■□□□□ 0.41
SSH3-210ENST00000532881 IFFO2Q5TF58 517 aa17.63■□□□□ 0.41
SSH3-210ENST00000532881 BICD2Q8TD16 824 aa17.63■□□□□ 0.41
SSH3-210ENST00000532881 TNMDQ9H2S6 317 aa17.63■□□□□ 0.41
SSH3-210ENST00000532881 HMG20BQ9P0W2 317 aa17.63■□□□□ 0.41
SSH3-210ENST00000532881 JCADQ9P266 1359 aa17.63■□□□□ 0.41
SSH3-210ENST00000532881 NOLC1Q14978 699 aaKnown RBP eCLIP17.62■□□□□ 0.41
SSH3-210ENST00000532881 TSGA10IPQ3SY00 556 aa17.62■□□□□ 0.41
SSH3-210ENST00000532881 UBE2Q2Q8WVN8 375 aa17.62■□□□□ 0.41
SSH3-210ENST00000532881 CCDC192P0DO97 292 aa17.62■□□□□ 0.41
SSH3-210ENST00000532881 MAP3K11Q16584 847 aa17.62■□□□□ 0.41
SSH3-210ENST00000532881 CSPP1Q1MSJ5 1256 aa17.62■□□□□ 0.41
SSH3-210ENST00000532881 FBXW7Q969H0 707 aa17.62■□□□□ 0.41
SSH3-210ENST00000532881 CWC25Q9NXE8 425 aaPredicted RBP17.62■□□□□ 0.41
SSH3-210ENST00000532881 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.62■□□□□ 0.41
SSH3-210ENST00000532881 MRC1P22897 1456 aa17.62■□□□□ 0.41
SSH3-210ENST00000532881 ARFGEF2Q9Y6D5 1785 aa17.61■□□□□ 0.41
SSH3-210ENST00000532881 A0A1B0GUL7 405 aa17.61■□□□□ 0.41
SSH3-210ENST00000532881 M0R2C6 588 aa17.61■□□□□ 0.41
SSH3-210ENST00000532881 PDCP20941 246 aa17.61■□□□□ 0.41
SSH3-210ENST00000532881 MCM5P33992 734 aa17.61■□□□□ 0.41
SSH3-210ENST00000532881 NRBP1Q9UHY1 535 aa17.61■□□□□ 0.41
SSH3-210ENST00000532881 RESTQ13127 1097 aa17.61■□□□□ 0.41
SSH3-210ENST00000532881 OTUD7BQ6GQQ9 843 aa17.61■□□□□ 0.41
SSH3-210ENST00000532881 PRDM11Q9NQV5 511 aa17.61■□□□□ 0.41
SSH3-210ENST00000532881 IFIT1P09914 478 aaKnown RBP17.6■□□□□ 0.41
SSH3-210ENST00000532881 HSPD1P10809 573 aaKnown RBP17.6■□□□□ 0.41
SSH3-210ENST00000532881 SCARF1Q14162 830 aa17.6■□□□□ 0.41
SSH3-210ENST00000532881 FAM89AQ96GI7 184 aa17.6■□□□□ 0.41
SSH3-210ENST00000532881 GJB4Q9NTQ9 266 aa17.6■□□□□ 0.41
SSH3-210ENST00000532881 U3KPZ7 1027 aaPredicted RBP17.6■□□□□ 0.41
SSH3-210ENST00000532881 COL18A1P39060 1754 aa17.6■□□□□ 0.41
SSH3-210ENST00000532881 ZCRB1Q8TBF4 217 aaKnown RBP17.6■□□□□ 0.41
SSH3-210ENST00000532881 DNAJC25Q9H1X3 360 aa17.6■□□□□ 0.41
SSH3-210ENST00000532881 CBX8Q9HC52 389 aa17.6■□□□□ 0.41
SSH3-210ENST00000532881 OSBP2Q969R2 916 aa17.59■□□□□ 0.41
SSH3-210ENST00000532881 MAST3O60307 1309 aa17.59■□□□□ 0.41
SSH3-210ENST00000532881 E7EWF7 191 aa17.59■□□□□ 0.41
SSH3-210ENST00000532881 PTGS1P23219 599 aa17.59■□□□□ 0.41
SSH3-210ENST00000532881 NSUN7Q8NE18 718 aaKnown RBP17.59■□□□□ 0.41
SSH3-210ENST00000532881 PIBF1Q8WXW3 757 aa17.59■□□□□ 0.41
SSH3-210ENST00000532881 LRMPQ12912 555 aa17.58■□□□□ 0.41
SSH3-210ENST00000532881 KRT32Q14532 448 aa17.58■□□□□ 0.41
SSH3-210ENST00000532881 SCAND2PQ9GZW5 306 aaPredicted RBP17.58■□□□□ 0.41
SSH3-210ENST00000532881 DENND2AQ9ULE3 1009 aa17.58■□□□□ 0.41
SSH3-210ENST00000532881 ADAMTSL3P82987 1691 aa17.58■□□□□ 0.41
SSH3-210ENST00000532881 SPATA31A3Q5VYP0 1347 aa17.58■□□□□ 0.41
SSH3-210ENST00000532881 PTPDC1A2A3K4 754 aa17.58■□□□□ 0.4
SSH3-210ENST00000532881 BCL11BQ9C0K0 894 aaPredicted RBP17.58■□□□□ 0.4
SSH3-210ENST00000532881 ALDH8A1Q9H2A2 487 aaPredicted RBP17.58■□□□□ 0.4
SSH3-210ENST00000532881 EYA2O00167 538 aa17.57■□□□□ 0.4
SSH3-210ENST00000532881 DHX32Q7L7V1 743 aaKnown RBP17.57■□□□□ 0.4
SSH3-210ENST00000532881 NKX2-3Q8TAU0 364 aa17.57■□□□□ 0.4
SSH3-210ENST00000532881 FAM200AQ8TCP9 573 aa17.57■□□□□ 0.4
SSH3-210ENST00000532881 ELP1O95163 1332 aa17.57■□□□□ 0.4
SSH3-210ENST00000532881 STRCP1A6NGW2 1772 aa17.56■□□□□ 0.4
SSH3-210ENST00000532881 ADD1P35611 737 aaKnown RBP17.56■□□□□ 0.4
SSH3-210ENST00000532881 ZMYM1Q5SVZ6 1142 aa17.56■□□□□ 0.4
SSH3-210ENST00000532881 SASS6Q6UVJ0 657 aa17.56■□□□□ 0.4
SSH3-210ENST00000532881 GOLPH3LQ9H4A5 285 aa17.56■□□□□ 0.4
SSH3-210ENST00000532881 GLI3P10071 1580 aa17.56■□□□□ 0.4
SSH3-210ENST00000532881 GPTP24298 496 aa17.56■□□□□ 0.4
SSH3-210ENST00000532881 WASHC4Q2M389 1173 aa17.56■□□□□ 0.4
SSH3-210ENST00000532881 VSIG10Q8N0Z9 540 aa17.56■□□□□ 0.4
SSH3-210ENST00000532881 USP28Q96RU2 1077 aa17.56■□□□□ 0.4
SSH3-210ENST00000532881 FOXP2O15409 715 aa17.55■□□□□ 0.4
SSH3-210ENST00000532881 TNS3Q68CZ2 1445 aa17.55■□□□□ 0.4
SSH3-210ENST00000532881 SH3TC1Q8TE82 1336 aa17.55■□□□□ 0.4
SSH3-210ENST00000532881 IL15P40933 162 aaPredicted RBP17.55■□□□□ 0.4
SSH3-210ENST00000532881 EXOSC10Q01780 885 aaKnown RBP17.55■□□□□ 0.4
SSH3-210ENST00000532881 CLSTN2Q9H4D0 955 aa17.55■□□□□ 0.4
SSH3-210ENST00000532881 ASAP1Q9ULH1 1129 aa17.55■□□□□ 0.4
SSH3-210ENST00000532881 PFKFB2O60825 505 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms