RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 TRIM33Q9UPN9 1127 aa6.63□□□□□ -1.35
ECHDC1-219ENST00000526299 FOXO3O43524 673 aa6.62□□□□□ -1.35
ECHDC1-219ENST00000526299 COBLO75128 1261 aa6.62□□□□□ -1.35
ECHDC1-219ENST00000526299 WEE1P30291 646 aa6.62□□□□□ -1.35
ECHDC1-219ENST00000526299 GP2P55259 537 aaKnown RBP6.62□□□□□ -1.35
ECHDC1-219ENST00000526299 SRA1Q9HD15 236 aaKnown RBP6.62□□□□□ -1.35
ECHDC1-219ENST00000526299 STOML1Q9UBI4 398 aa6.62□□□□□ -1.35
ECHDC1-219ENST00000526299 KCNMB2Q9Y691 235 aa6.62□□□□□ -1.35
ECHDC1-219ENST00000526299 FAM196BA6NMK8 535 aa6.61□□□□□ -1.35
ECHDC1-219ENST00000526299 KIAA1324LA8MWY0 1029 aaPredicted RBP6.61□□□□□ -1.35
ECHDC1-219ENST00000526299 ADAMTS4O75173 837 aa6.61□□□□□ -1.35
ECHDC1-219ENST00000526299 WISP1O95388 367 aa6.61□□□□□ -1.35
ECHDC1-219ENST00000526299 MAP4K3Q8IVH8 894 aa6.61□□□□□ -1.35
ECHDC1-219ENST00000526299 ARMC10Q8N2F6 343 aa6.61□□□□□ -1.35
ECHDC1-219ENST00000526299 GALNT11Q8NCW6 608 aa6.61□□□□□ -1.35
ECHDC1-219ENST00000526299 ARXQ96QS3 562 aa6.61□□□□□ -1.35
ECHDC1-219ENST00000526299 GSC2O15499 205 aa6.6□□□□□ -1.35
ECHDC1-219ENST00000526299 SOX18P35713 384 aa6.6□□□□□ -1.35
ECHDC1-219ENST00000526299 PPP1R12CQ9BZL4 782 aa6.6□□□□□ -1.35
ECHDC1-219ENST00000526299 RBSNQ9H1K0 784 aa6.6□□□□□ -1.35
ECHDC1-219ENST00000526299 PPME1Q9Y570 386 aa6.6□□□□□ -1.35
ECHDC1-219ENST00000526299 LINC01387J3KSC0 135 aa6.59□□□□□ -1.35
ECHDC1-219ENST00000526299 HOXD8P13378 290 aaPredicted RBP6.59□□□□□ -1.35
ECHDC1-219ENST00000526299 TXNDC11Q6PKC3 985 aa6.59□□□□□ -1.35
ECHDC1-219ENST00000526299 ZDHHC13Q8IUH4 622 aa6.59□□□□□ -1.35
ECHDC1-219ENST00000526299 DCAF11Q8TEB1 546 aa6.59□□□□□ -1.35
ECHDC1-219ENST00000526299 CLUAP1Q96AJ1 413 aa6.59□□□□□ -1.35
ECHDC1-219ENST00000526299 VRTNQ9H8Y1 702 aa6.59□□□□□ -1.35
ECHDC1-219ENST00000526299 KCNK4Q9NYG8 393 aa6.59□□□□□ -1.35
ECHDC1-219ENST00000526299 DHX15O43143 795 aaKnown RBP6.58□□□□□ -1.36
ECHDC1-219ENST00000526299 YBX3P16989 372 aaKnown RBP eCLIP6.58□□□□□ -1.36
ECHDC1-219ENST00000526299 COX20Q5RI15 118 aa6.58□□□□□ -1.36
ECHDC1-219ENST00000526299 ACAD11Q709F0 780 aa6.58□□□□□ -1.36
ECHDC1-219ENST00000526299 FNBP4Q8N3X1 1017 aaPredicted RBP6.58□□□□□ -1.36
ECHDC1-219ENST00000526299 LMOD1P29536 600 aaPredicted RBP6.57□□□□□ -1.36
ECHDC1-219ENST00000526299 CDC25BP30305 580 aa6.57□□□□□ -1.36
ECHDC1-219ENST00000526299 NFIAQ12857 509 aa6.57□□□□□ -1.36
ECHDC1-219ENST00000526299 TRIP4Q15650 581 aaPredicted RBP6.57□□□□□ -1.36
ECHDC1-219ENST00000526299 COL13A1Q5TAT6 717 aaPredicted RBP6.57□□□□□ -1.36
ECHDC1-219ENST00000526299 NLRP13Q86W25 1043 aa6.57□□□□□ -1.36
ECHDC1-219ENST00000526299 MUC3BQ9H195 1237 aa6.57□□□□□ -1.36
ECHDC1-219ENST00000526299 C7orf69Q9H7B7 122 aa6.57□□□□□ -1.36
ECHDC1-219ENST00000526299 RNF114Q9Y508 228 aa6.57□□□□□ -1.36
ECHDC1-219ENST00000526299 HMX2A2RU54 273 aa6.56□□□□□ -1.36
ECHDC1-219ENST00000526299 PRKCSHP14314 528 aaPredicted RBP6.56□□□□□ -1.36
ECHDC1-219ENST00000526299 SPINK2P20155 84 aa6.56□□□□□ -1.36
ECHDC1-219ENST00000526299 CD68P34810 354 aaPredicted RBP6.56□□□□□ -1.36
ECHDC1-219ENST00000526299 ATP11AP98196 1134 aa6.56□□□□□ -1.36
ECHDC1-219ENST00000526299 ADAMTSL4Q6UY14 1074 aa6.56□□□□□ -1.36
ECHDC1-219ENST00000526299 PROSER2Q86WR7 435 aaPredicted RBP6.56□□□□□ -1.36
ECHDC1-219ENST00000526299 TRIM42Q8IWZ5 723 aa6.56□□□□□ -1.36
ECHDC1-219ENST00000526299 ETFBKMTQ8IXQ9 262 aa6.56□□□□□ -1.36
ECHDC1-219ENST00000526299 CACTIN-AS1Q8N1I8 211 aa6.56□□□□□ -1.36
ECHDC1-219ENST00000526299 UTP4Q969X6 686 aaKnown RBP6.56□□□□□ -1.36
ECHDC1-219ENST00000526299 CARD10Q9BWT7 1032 aa6.56□□□□□ -1.36
ECHDC1-219ENST00000526299 LACRTQ9GZZ8 138 aa6.56□□□□□ -1.36
ECHDC1-219ENST00000526299 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.56□□□□□ -1.36
ECHDC1-219ENST00000526299 TM4SF5O14894 197 aa6.55□□□□□ -1.36
ECHDC1-219ENST00000526299 FKBP5Q13451 457 aaPredicted RBP6.55□□□□□ -1.36
ECHDC1-219ENST00000526299 CEP135Q66GS9 1140 aa6.55□□□□□ -1.36
ECHDC1-219ENST00000526299 KIAA1211Q6ZU35 1233 aa6.55□□□□□ -1.36
ECHDC1-219ENST00000526299 CALR3Q96L12 384 aaKnown RBP6.55□□□□□ -1.36
ECHDC1-219ENST00000526299 CEP41Q9BYV8 373 aa6.55□□□□□ -1.36
ECHDC1-219ENST00000526299 PRR19A6NJB7 356 aa6.54□□□□□ -1.36
ECHDC1-219ENST00000526299 CDC27P30260 824 aa6.54□□□□□ -1.36
ECHDC1-219ENST00000526299 GRIK1P39086 918 aa6.54□□□□□ -1.36
ECHDC1-219ENST00000526299 FAM26DQ5JW98 314 aa6.54□□□□□ -1.36
ECHDC1-219ENST00000526299 RNF43Q68DV7 783 aa6.54□□□□□ -1.36
ECHDC1-219ENST00000526299 INTS5Q6P9B9 1019 aaKnown RBP6.54□□□□□ -1.36
ECHDC1-219ENST00000526299 OR13H1Q8NG92 308 aa6.54□□□□□ -1.36
ECHDC1-219ENST00000526299 FAM46AQ96IP4 442 aaKnown RBP6.54□□□□□ -1.36
ECHDC1-219ENST00000526299 SAP130Q9H0E3 1048 aa6.54□□□□□ -1.36
ECHDC1-219ENST00000526299 DDX3YO15523 660 aaKnown RBP6.53□□□□□ -1.36
ECHDC1-219ENST00000526299 DTX1Q86Y01 620 aa6.53□□□□□ -1.36
ECHDC1-219ENST00000526299 FAM200AQ8TCP9 573 aa6.53□□□□□ -1.36
ECHDC1-219ENST00000526299 PRIMPOLQ96LW4 560 aa6.53□□□□□ -1.36
ECHDC1-219ENST00000526299 DBNDD2Q9BQY9 259 aa6.53□□□□□ -1.36
ECHDC1-219ENST00000526299 RASSF4Q9H2L5 321 aa6.53□□□□□ -1.36
ECHDC1-219ENST00000526299 UBAP1LF5GYI3 381 aa6.52□□□□□ -1.37
ECHDC1-219ENST00000526299 FSCN2O14926 492 aa6.52□□□□□ -1.37
ECHDC1-219ENST00000526299 HYAL2Q12891 473 aa6.52□□□□□ -1.37
ECHDC1-219ENST00000526299 DUOXA2Q1HG44 320 aa6.52□□□□□ -1.37
ECHDC1-219ENST00000526299 UVSSAQ2YD98 709 aa6.52□□□□□ -1.37
ECHDC1-219ENST00000526299 CDCA8Q53HL2 280 aa6.52□□□□□ -1.37
ECHDC1-219ENST00000526299 MYRFLQ96LU7 910 aa6.52□□□□□ -1.37
ECHDC1-219ENST00000526299 SH2B1Q9NRF2 756 aaPredicted RBP6.52□□□□□ -1.37
ECHDC1-219ENST00000526299 ARID1BQ8NFD5 2236 aaPredicted RBP6.52□□□□□ -1.37
ECHDC1-219ENST00000526299 A6NJR5 290 aa6.51□□□□□ -1.37
ECHDC1-219ENST00000526299 ADAM11O75078 769 aa6.51□□□□□ -1.37
ECHDC1-219ENST00000526299 SMNDC1O75940 238 aaKnown RBP eCLIP6.51□□□□□ -1.37
ECHDC1-219ENST00000526299 WNT11O96014 354 aa6.51□□□□□ -1.37
ECHDC1-219ENST00000526299 EPHA1P21709 976 aa6.51□□□□□ -1.37
ECHDC1-219ENST00000526299 BRD2P25440 801 aaKnown RBP6.51□□□□□ -1.37
ECHDC1-219ENST00000526299 FAM20CQ8IXL6 584 aa6.51□□□□□ -1.37
ECHDC1-219ENST00000526299 SHKBP1Q8TBC3 707 aa6.51□□□□□ -1.37
ECHDC1-219ENST00000526299 UBASH3BQ8TF42 649 aa6.51□□□□□ -1.37
ECHDC1-219ENST00000526299 FOXD4L4Q8WXT5 416 aaPredicted RBP6.51□□□□□ -1.37
ECHDC1-219ENST00000526299 SPACA7Q96KW9 195 aa6.51□□□□□ -1.37
ECHDC1-219ENST00000526299 SCNN1AP37088 669 aa6.5□□□□□ -1.37
ECHDC1-219ENST00000526299 CLEC10AQ8IUN9 316 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms