RNA–Protein interactions for RNA: ENST00000515421.1

CDV3-209, Transcript of CDV3 homolog, humanhuman

TSL 3 BASIC

Gene CDV3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDV3-209ENST00000515421 CASZ1Q86V15 1759 aa11.09□□□□□ -0.63
CDV3-209ENST00000515421 CGNL1Q0VF96 1302 aa11.09□□□□□ -0.63
CDV3-209ENST00000515421 ST20-MTHFSA0A0A6YYL1 179 aa11.09□□□□□ -0.63
CDV3-209ENST00000515421 POTEMA6NI47 508 aa11.09□□□□□ -0.63
CDV3-209ENST00000515421 POLD1P28340 1107 aa11.09□□□□□ -0.63
CDV3-209ENST00000515421 HOXC9P31274 260 aa11.09□□□□□ -0.63
CDV3-209ENST00000515421 SEC13P55735 322 aa11.09□□□□□ -0.63
CDV3-209ENST00000515421 RETREG3Q86VR2 466 aa11.09□□□□□ -0.63
CDV3-209ENST00000515421 SYMPKQ92797 1274 aaKnown RBP11.09□□□□□ -0.63
CDV3-209ENST00000515421 RNF34Q969K3 372 aa11.09□□□□□ -0.63
CDV3-209ENST00000515421 TESK2Q96S53 571 aa11.09□□□□□ -0.63
CDV3-209ENST00000515421 METTL14Q9HCE5 456 aaKnown RBP11.09□□□□□ -0.63
CDV3-209ENST00000515421 MRS2Q9HD23 443 aa11.09□□□□□ -0.63
CDV3-209ENST00000515421 NOD1Q9Y239 953 aa11.09□□□□□ -0.63
CDV3-209ENST00000515421 MAP3K19Q56UN5 1328 aa11.08□□□□□ -0.64
CDV3-209ENST00000515421 NHSQ6T4R5 1651 aa11.08□□□□□ -0.64
CDV3-209ENST00000515421 RTL1A6NKG5 1358 aa11.08□□□□□ -0.64
CDV3-209ENST00000515421 DKK1O94907 266 aa11.08□□□□□ -0.64
CDV3-209ENST00000515421 TMF1P82094 1093 aa11.08□□□□□ -0.64
CDV3-209ENST00000515421 FANCCQ00597 558 aa11.08□□□□□ -0.64
CDV3-209ENST00000515421 ZCRB1Q8TBF4 217 aaKnown RBP11.08□□□□□ -0.64
CDV3-209ENST00000515421 LTV1Q96GA3 475 aaPredicted RBP11.08□□□□□ -0.64
CDV3-209ENST00000515421 RBCK1Q9BYM8 510 aa11.08□□□□□ -0.64
CDV3-209ENST00000515421 IQSEC3Q9UPP2 1182 aaPredicted RBP11.08□□□□□ -0.64
CDV3-209ENST00000515421 RBM19Q9Y4C8 960 aaKnown RBP11.08□□□□□ -0.64
CDV3-209ENST00000515421 ANKRD36BQ8N2N9 1353 aa11.07□□□□□ -0.64
CDV3-209ENST00000515421 LYPD8Q6UX82 237 aa11.07□□□□□ -0.64
CDV3-209ENST00000515421 SYTL4Q96C24 671 aaPredicted RBP11.07□□□□□ -0.64
CDV3-209ENST00000515421 GMLQ99445 158 aa11.07□□□□□ -0.64
CDV3-209ENST00000515421 LRRC4BQ9NT99 713 aa11.07□□□□□ -0.64
CDV3-209ENST00000515421 SMG6Q86US8 1419 aaKnown RBP11.06□□□□□ -0.64
CDV3-209ENST00000515421 FMR1Q06787 632 aaKnown RBP eCLIP11.06□□□□□ -0.64
CDV3-209ENST00000515421 FUT2Q10981 343 aa11.06□□□□□ -0.64
CDV3-209ENST00000515421 ZNF827Q17R98 1081 aa11.06□□□□□ -0.64
CDV3-209ENST00000515421 TRAF7Q6Q0C0 670 aa11.06□□□□□ -0.64
CDV3-209ENST00000515421 RAPGEF4Q8WZA2 1011 aa11.06□□□□□ -0.64
CDV3-209ENST00000515421 GPATCH3Q96I76 525 aa11.06□□□□□ -0.64
CDV3-209ENST00000515421 TFCP2L1Q9NZI6 479 aa11.06□□□□□ -0.64
CDV3-209ENST00000515421 SEPT3Q9UH03 358 aa11.06□□□□□ -0.64
CDV3-209ENST00000515421 COLQQ9Y215 455 aaPredicted RBP11.06□□□□□ -0.64
CDV3-209ENST00000515421 PPME1Q9Y570 386 aa11.06□□□□□ -0.64
CDV3-209ENST00000515421 IGBP1P78318 339 aa11.05□□□□□ -0.64
CDV3-209ENST00000515421 TMC7Q7Z402 723 aa11.05□□□□□ -0.64
CDV3-209ENST00000515421 KIF24Q5T7B8 1368 aa11.05□□□□□ -0.64
CDV3-209ENST00000515421 RGPD5Q99666 1765 aa11.05□□□□□ -0.64
CDV3-209ENST00000515421 hCG_2014768A0A024R1R8 64 aa11.04□□□□□ -0.64
CDV3-209ENST00000515421 SMAPO00193 183 aa11.04□□□□□ -0.64
CDV3-209ENST00000515421 FYB1O15117 783 aa11.04□□□□□ -0.64
CDV3-209ENST00000515421 SEC24BO95487 1268 aa11.04□□□□□ -0.64
CDV3-209ENST00000515421 MTMR3Q13615 1198 aa11.04□□□□□ -0.64
CDV3-209ENST00000515421 GPR162Q16538 588 aa11.04□□□□□ -0.64
CDV3-209ENST00000515421 PTPROQ16827 1216 aa11.04□□□□□ -0.64
CDV3-209ENST00000515421 SOGA3Q5TF21 947 aa11.04□□□□□ -0.64
CDV3-209ENST00000515421 ZNF784Q8NCA9 323 aaPredicted RBP11.04□□□□□ -0.64
CDV3-209ENST00000515421 SPACA7Q96KW9 195 aa11.04□□□□□ -0.64
CDV3-209ENST00000515421 MYOM1P52179 1685 aa11.03□□□□□ -0.64
CDV3-209ENST00000515421 FAM208AQ9UK61 1670 aaKnown RBP11.03□□□□□ -0.64
CDV3-209ENST00000515421 PAPPAQ13219 1627 aa11.03□□□□□ -0.64
CDV3-209ENST00000515421 USP47Q96K76 1375 aa11.03□□□□□ -0.64
CDV3-209ENST00000515421 TREHO43280 583 aa11.03□□□□□ -0.64
CDV3-209ENST00000515421 PTCD1O75127 700 aaKnown RBP11.03□□□□□ -0.64
CDV3-209ENST00000515421 PRPF40AO75400 957 aaKnown RBP11.03□□□□□ -0.64
CDV3-209ENST00000515421 TATP17735 454 aaPredicted RBP11.03□□□□□ -0.64
CDV3-209ENST00000515421 RBL2Q08999 1139 aa11.03□□□□□ -0.64
CDV3-209ENST00000515421 POTEGQ6S5H5 508 aa11.03□□□□□ -0.64
CDV3-209ENST00000515421 TMC4Q7Z404 712 aa11.03□□□□□ -0.64
CDV3-209ENST00000515421 FLAD1Q8NFF5 587 aa11.03□□□□□ -0.64
CDV3-209ENST00000515421 KCNB2Q92953 911 aa11.03□□□□□ -0.64
CDV3-209ENST00000515421 PIF1Q9H611 641 aa11.03□□□□□ -0.64
CDV3-209ENST00000515421 BCL2L12Q9HB09 334 aa11.03□□□□□ -0.64
CDV3-209ENST00000515421 PARP2Q9UGN5 583 aa11.03□□□□□ -0.64
CDV3-209ENST00000515421 CCNL1Q9UK58 526 aaPredicted RBP11.03□□□□□ -0.64
CDV3-209ENST00000515421 KIAA1024Q9UPX6 916 aa11.03□□□□□ -0.64
CDV3-209ENST00000515421 INSRP06213 1382 aa11.02□□□□□ -0.65
CDV3-209ENST00000515421 PNPLA7Q6ZV29 1317 aa11.02□□□□□ -0.65
CDV3-209ENST00000515421 PCDH11XQ9BZA7 1347 aa11.02□□□□□ -0.65
CDV3-209ENST00000515421 PCDH11YQ9BZA8 1340 aa11.02□□□□□ -0.65
CDV3-209ENST00000515421 ZBTB7BO15156 539 aaPredicted RBP11.02□□□□□ -0.65
CDV3-209ENST00000515421 SORBS3O60504 671 aa11.02□□□□□ -0.65
CDV3-209ENST00000515421 ZNF76P36508 570 aa11.02□□□□□ -0.65
CDV3-209ENST00000515421 ATP6V1AP38606 617 aa11.02□□□□□ -0.65
CDV3-209ENST00000515421 NBPF6Q5VWK0 638 aa11.02□□□□□ -0.65
CDV3-209ENST00000515421 NLGN1Q8N2Q7 840 aa11.02□□□□□ -0.65
CDV3-209ENST00000515421 NBPF4Q96M43 638 aa11.02□□□□□ -0.65
CDV3-209ENST00000515421 ACBD3Q9H3P7 528 aa11.02□□□□□ -0.65
CDV3-209ENST00000515421 ZSWIM4Q9H7M6 989 aa11.02□□□□□ -0.65
CDV3-209ENST00000515421 GPSM3Q9Y4H4 160 aa11.02□□□□□ -0.65
CDV3-209ENST00000515421 LTN1O94822 1766 aa11.02□□□□□ -0.65
CDV3-209ENST00000515421 DNAJA1P31689 397 aaKnown RBP11.01□□□□□ -0.65
CDV3-209ENST00000515421 RRS1Q15050 365 aaKnown RBP11.01□□□□□ -0.65
CDV3-209ENST00000515421 CCDC181Q5TID7 509 aa11.01□□□□□ -0.65
CDV3-209ENST00000515421 MKNK1Q9BUB5 465 aa11.01□□□□□ -0.65
CDV3-209ENST00000515421 GGNBP2Q9H3C7 697 aa11.01□□□□□ -0.65
CDV3-209ENST00000515421 RIPOR2Q9Y4F9 1068 aa11.01□□□□□ -0.65
CDV3-209ENST00000515421 PCDHB9Q9Y5E1 797 aa11.01□□□□□ -0.65
CDV3-209ENST00000515421 NSD2O96028 1365 aa11□□□□□ -0.65
CDV3-209ENST00000515421 FLT4P35916 1363 aa11□□□□□ -0.65
CDV3-209ENST00000515421 GRIN3BO60391 1043 aa11□□□□□ -0.65
CDV3-209ENST00000515421 LDHBP07195 334 aaKnown RBP11□□□□□ -0.65
CDV3-209ENST00000515421 IBSPP21815 317 aaPredicted RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms