RNA–Protein interactions for RNA: ENST00000493551.1

CLIP4-212, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 3

Gene CLIP4, Length 627 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-212ENST00000493551 GRIK1P39086 918 aa7.91□□□□□ -1.14
CLIP4-212ENST00000493551 MCM6Q14566 821 aa7.91□□□□□ -1.14
CLIP4-212ENST00000493551 INTS5Q6P9B9 1019 aaKnown RBP7.91□□□□□ -1.14
CLIP4-212ENST00000493551 WWC1Q8IX03 1113 aa7.91□□□□□ -1.14
CLIP4-212ENST00000493551 SCG3Q8WXD2 468 aaKnown RBP7.91□□□□□ -1.14
CLIP4-212ENST00000493551 GRIN2BQ13224 1484 aa7.91□□□□□ -1.14
CLIP4-212ENST00000493551 CUX1P39880 1505 aa7.9□□□□□ -1.14
CLIP4-212ENST00000493551 SYNJ2O15056 1496 aa7.9□□□□□ -1.14
CLIP4-212ENST00000493551 MAGI1Q96QZ7 1491 aaPredicted RBP7.9□□□□□ -1.14
CLIP4-212ENST00000493551 SPINK2P20155 84 aa7.9□□□□□ -1.14
CLIP4-212ENST00000493551 TARSP26639 723 aaKnown RBP7.9□□□□□ -1.14
CLIP4-212ENST00000493551 IDH3AP50213 366 aa7.9□□□□□ -1.14
CLIP4-212ENST00000493551 NRLP54845 237 aa7.9□□□□□ -1.14
CLIP4-212ENST00000493551 IFT43Q96FT9 208 aa7.9□□□□□ -1.14
CLIP4-212ENST00000493551 COG6Q9Y2V7 657 aa7.9□□□□□ -1.14
CLIP4-212ENST00000493551 HFE2Q6ZVN8 426 aa7.89□□□□□ -1.15
CLIP4-212ENST00000493551 ZDHHC13Q8IUH4 622 aa7.89□□□□□ -1.15
CLIP4-212ENST00000493551 DHX15O43143 795 aaKnown RBP7.88□□□□□ -1.15
CLIP4-212ENST00000493551 SASH3O75995 380 aa7.88□□□□□ -1.15
CLIP4-212ENST00000493551 ARSDP51689 593 aa7.88□□□□□ -1.15
CLIP4-212ENST00000493551 AGGF1Q8N302 714 aaeCLIP7.88□□□□□ -1.15
CLIP4-212ENST00000493551 ZNF594Q96JF6 807 aaPredicted RBP7.88□□□□□ -1.15
CLIP4-212ENST00000493551 MKRN1Q9UHC7 482 aaKnown RBP7.88□□□□□ -1.15
CLIP4-212ENST00000493551 PBRM1Q86U86 1689 aa7.88□□□□□ -1.15
CLIP4-212ENST00000493551 ADAMTS4O75173 837 aa7.87□□□□□ -1.15
CLIP4-212ENST00000493551 DKK1O94907 266 aa7.87□□□□□ -1.15
CLIP4-212ENST00000493551 NFIAQ12857 509 aa7.87□□□□□ -1.15
CLIP4-212ENST00000493551 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.87□□□□□ -1.15
CLIP4-212ENST00000493551 PLD4Q96BZ4 506 aa7.87□□□□□ -1.15
CLIP4-212ENST00000493551 ATP9BO43861 1147 aa7.86□□□□□ -1.15
CLIP4-212ENST00000493551 SETDB1Q15047 1291 aa7.86□□□□□ -1.15
CLIP4-212ENST00000493551 GDF6Q6KF10 455 aaPredicted RBP7.86□□□□□ -1.15
CLIP4-212ENST00000493551 DTX1Q86Y01 620 aa7.86□□□□□ -1.15
CLIP4-212ENST00000493551 IL22RA1Q8N6P7 574 aa7.86□□□□□ -1.15
CLIP4-212ENST00000493551 TLR7Q9NYK1 1049 aaKnown RBP7.86□□□□□ -1.15
CLIP4-212ENST00000493551 WNT11O96014 354 aa7.85□□□□□ -1.15
CLIP4-212ENST00000493551 UVSSAQ2YD98 709 aa7.85□□□□□ -1.15
CLIP4-212ENST00000493551 UBL7Q96S82 380 aaPredicted RBP7.85□□□□□ -1.15
CLIP4-212ENST00000493551 CEP41Q9BYV8 373 aa7.85□□□□□ -1.15
CLIP4-212ENST00000493551 GHRHP01286 108 aa7.84□□□□□ -1.15
CLIP4-212ENST00000493551 SEC13P55735 322 aa7.84□□□□□ -1.15
CLIP4-212ENST00000493551 CACTIN-AS1Q8N1I8 211 aa7.84□□□□□ -1.15
CLIP4-212ENST00000493551 ARMC10Q8N2F6 343 aa7.84□□□□□ -1.15
CLIP4-212ENST00000493551 DBNDD2Q9BQY9 259 aa7.84□□□□□ -1.15
CLIP4-212ENST00000493551 MUC3BQ9H195 1237 aa7.84□□□□□ -1.15
CLIP4-212ENST00000493551 RBSNQ9H1K0 784 aa7.84□□□□□ -1.15
CLIP4-212ENST00000493551 KLK14Q9P0G3 267 aa7.84□□□□□ -1.15
CLIP4-212ENST00000493551 WDR97A6NE52 1622 aa7.84□□□□□ -1.15
CLIP4-212ENST00000493551 CEP170Q5SW79 1584 aa7.84□□□□□ -1.15
CLIP4-212ENST00000493551 LOC102724428A0A0B4J2F2 783 aa7.83□□□□□ -1.16
CLIP4-212ENST00000493551 RASA1P20936 1047 aa7.83□□□□□ -1.16
CLIP4-212ENST00000493551 SIK1P57059 783 aa7.83□□□□□ -1.16
CLIP4-212ENST00000493551 UTP4Q969X6 686 aaKnown RBP7.83□□□□□ -1.16
CLIP4-212ENST00000493551 UCN2Q96RP3 112 aa7.83□□□□□ -1.16
CLIP4-212ENST00000493551 KRTAP4-9Q9BYQ8 210 aa7.83□□□□□ -1.16
CLIP4-212ENST00000493551 J3QW42 95 aa7.82□□□□□ -1.16
CLIP4-212ENST00000493551 MICAL2O94851 1124 aa7.82□□□□□ -1.16
CLIP4-212ENST00000493551 EGFRP00533 1210 aa7.82□□□□□ -1.16
CLIP4-212ENST00000493551 PSAPP07602 524 aa7.82□□□□□ -1.16
CLIP4-212ENST00000493551 FAM69CQ0P6D2 419 aa7.82□□□□□ -1.16
CLIP4-212ENST00000493551 RNF43Q68DV7 783 aa7.82□□□□□ -1.16
CLIP4-212ENST00000493551 C7orf69Q9H7B7 122 aa7.82□□□□□ -1.16
CLIP4-212ENST00000493551 ADGRE2Q9UHX3 823 aa7.82□□□□□ -1.16
CLIP4-212ENST00000493551 GRIN2AQ12879 1464 aa7.81□□□□□ -1.16
CLIP4-212ENST00000493551 TTBK1Q5TCY1 1321 aaPredicted RBP7.81□□□□□ -1.16
CLIP4-212ENST00000493551 KIF13AQ9H1H9 1805 aa7.81□□□□□ -1.16
CLIP4-212ENST00000493551 PRR19A6NJB7 356 aa7.81□□□□□ -1.16
CLIP4-212ENST00000493551 IGFBP4P22692 258 aa7.81□□□□□ -1.16
CLIP4-212ENST00000493551 JAG1P78504 1218 aa7.81□□□□□ -1.16
CLIP4-212ENST00000493551 DGKZQ13574 1117 aa7.81□□□□□ -1.16
CLIP4-212ENST00000493551 ADAMTS19Q8TE59 1207 aa7.81□□□□□ -1.16
CLIP4-212ENST00000493551 HOXD8P13378 290 aaPredicted RBP7.8□□□□□ -1.16
CLIP4-212ENST00000493551 SOX18P35713 384 aa7.8□□□□□ -1.16
CLIP4-212ENST00000493551 NSUN5Q96P11 429 aaKnown RBP7.8□□□□□ -1.16
CLIP4-212ENST00000493551 HINFPQ9BQA5 517 aa7.8□□□□□ -1.16
CLIP4-212ENST00000493551 PPME1Q9Y570 386 aa7.8□□□□□ -1.16
CLIP4-212ENST00000493551 ABCA5Q8WWZ7 1642 aa7.8□□□□□ -1.16
CLIP4-212ENST00000493551 ACAD11Q709F0 780 aa7.79□□□□□ -1.16
CLIP4-212ENST00000493551 TRIM42Q8IWZ5 723 aa7.79□□□□□ -1.16
CLIP4-212ENST00000493551 RTCBQ9Y3I0 505 aaKnown RBP7.79□□□□□ -1.16
CLIP4-212ENST00000493551 ADAMTS12P58397 1594 aa7.79□□□□□ -1.16
CLIP4-212ENST00000493551 HMX2A2RU54 273 aa7.78□□□□□ -1.16
CLIP4-212ENST00000493551 XYLBO75191 536 aa7.78□□□□□ -1.16
CLIP4-212ENST00000493551 WISP1O95388 367 aa7.78□□□□□ -1.16
CLIP4-212ENST00000493551 GALNT11Q8NCW6 608 aa7.78□□□□□ -1.16
CLIP4-212ENST00000493551 FAM46AQ96IP4 442 aaKnown RBP7.78□□□□□ -1.16
CLIP4-212ENST00000493551 MYRFLQ96LU7 910 aa7.78□□□□□ -1.16
CLIP4-212ENST00000493551 TRIM33Q9UPN9 1127 aa7.78□□□□□ -1.16
CLIP4-212ENST00000493551 PRG4Q92954 1404 aaPredicted RBP7.78□□□□□ -1.16
CLIP4-212ENST00000493551 POM121CA8CG34 1229 aa7.77□□□□□ -1.17
CLIP4-212ENST00000493551 MMP20O60882 483 aa7.77□□□□□ -1.17
CLIP4-212ENST00000493551 CD68P34810 354 aaPredicted RBP7.77□□□□□ -1.17
CLIP4-212ENST00000493551 QTRT2Q9H974 415 aaKnown RBP7.77□□□□□ -1.17
CLIP4-212ENST00000493551 ABCA10Q8WWZ4 1543 aa7.77□□□□□ -1.17
CLIP4-212ENST00000493551 LGR5O75473 907 aa7.76□□□□□ -1.17
CLIP4-212ENST00000493551 C11orf91Q3C1V1 193 aa7.76□□□□□ -1.17
CLIP4-212ENST00000493551 HDGFL1Q5TGJ6 251 aa7.76□□□□□ -1.17
CLIP4-212ENST00000493551 TSPOAP1O95153 1857 aa7.76□□□□□ -1.17
CLIP4-212ENST00000493551 NUP160Q12769 1436 aa7.76□□□□□ -1.17
CLIP4-212ENST00000493551 KDM6BO15054 1643 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms