RNA–Protein interactions for RNA: ENST00000493060.5

NVL-222, Transcript of nuclear VCP-like, human

TSL 2

Gene NVL, Length 639 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NVL-222	ENST00000493060	PSME4	Q14997	1843 aa		11.28	□□□□□ -0.6
NVL-222	ENST00000493060	ITGBL1	O95965	494 aa	Predicted RBP	11.28	□□□□□ -0.6
NVL-222	ENST00000493060	TAF7	Q15545	349 aa	Predicted RBP	11.28	□□□□□ -0.6
NVL-222	ENST00000493060	PCDHGA10	Q9Y5H3	936 aa		11.28	□□□□□ -0.6
NVL-222	ENST00000493060	UBN2	Q6ZU65	1347 aa		11.28	□□□□□ -0.6
NVL-222	ENST00000493060	FZD9	O00144	591 aa		11.27	□□□□□ -0.61
NVL-222	ENST00000493060	COL9A1	P20849	921 aa		11.27	□□□□□ -0.61
NVL-222	ENST00000493060	IARS	P41252	1262 aa	Known RBP	11.27	□□□□□ -0.61
NVL-222	ENST00000493060	HNRNPU	Q00839	825 aa	Known RBP eCLIP	11.27	□□□□□ -0.61
NVL-222	ENST00000493060	NUTM1	Q86Y26	1132 aa		11.27	□□□□□ -0.61
NVL-222	ENST00000493060	WNT2B	Q93097	391 aa		11.27	□□□□□ -0.61
NVL-222	ENST00000493060	RNF123	Q5XPI4	1314 aa		11.27	□□□□□ -0.61
NVL-222	ENST00000493060	FOXN1	O15353	648 aa		11.26	□□□□□ -0.61
NVL-222	ENST00000493060	TTLL7	Q6ZT98	887 aa		11.26	□□□□□ -0.61
NVL-222	ENST00000493060	RTKN2	Q8IZC4	609 aa		11.26	□□□□□ -0.61
NVL-222	ENST00000493060	FAM9B	Q8IZU0	186 aa		11.26	□□□□□ -0.61
NVL-222	ENST00000493060	MRPL50	Q8N5N7	158 aa	Known RBP	11.26	□□□□□ -0.61
NVL-222	ENST00000493060	PLEKHF1	Q96S99	279 aa		11.26	□□□□□ -0.61
NVL-222	ENST00000493060	PSMD1	Q99460	953 aa		11.26	□□□□□ -0.61
NVL-222	ENST00000493060	HACL1	Q9UJ83	578 aa		11.26	□□□□□ -0.61
NVL-222	ENST00000493060	MAP3K15	Q6ZN16	1313 aa		11.26	□□□□□ -0.61
NVL-222	ENST00000493060	SPEF2	Q9C093	1822 aa		11.25	□□□□□ -0.61
NVL-222	ENST00000493060	DUOX1	Q9NRD9	1551 aa		11.25	□□□□□ -0.61
NVL-222	ENST00000493060	CASP8AP2	Q9UKL3	1982 aa		11.25	□□□□□ -0.61
NVL-222	ENST00000493060	ERVV-1	B6SEH8	477 aa		11.25	□□□□□ -0.61
NVL-222	ENST00000493060	ALDH1B1	P30837	517 aa		11.25	□□□□□ -0.61
NVL-222	ENST00000493060	EPHX2	P34913	555 aa		11.25	□□□□□ -0.61
NVL-222	ENST00000493060	PROX2	Q3B8N5	592 aa		11.25	□□□□□ -0.61
NVL-222	ENST00000493060	EAPP	Q56P03	285 aa	Predicted RBP	11.25	□□□□□ -0.61
NVL-222	ENST00000493060	SYNE4	Q8N205	404 aa		11.25	□□□□□ -0.61
NVL-222	ENST00000493060	NGEF	Q8N5V2	710 aa		11.25	□□□□□ -0.61
NVL-222	ENST00000493060	THUMPD2	Q9BTF0	503 aa	Known RBP	11.25	□□□□□ -0.61
NVL-222	ENST00000493060	SCN9A	Q15858	1988 aa		11.25	□□□□□ -0.61
NVL-222	ENST00000493060	COL4A1	P02462	1669 aa		11.24	□□□□□ -0.61
NVL-222	ENST00000493060	TMEM88B	A6NKF7	163 aa		11.24	□□□□□ -0.61
NVL-222	ENST00000493060	HOXA10	P31260	410 aa	Predicted RBP	11.24	□□□□□ -0.61
NVL-222	ENST00000493060	VEGFB	P49765	207 aa		11.24	□□□□□ -0.61
NVL-222	ENST00000493060	EIF4A1	P60842	406 aa	Known RBP	11.24	□□□□□ -0.61
NVL-222	ENST00000493060	MAP1S	Q66K74	1059 aa	Predicted RBP	11.24	□□□□□ -0.61
NVL-222	ENST00000493060	GPC2	Q8N158	579 aa		11.24	□□□□□ -0.61
NVL-222	ENST00000493060	NYX	Q9GZU5	481 aa		11.24	□□□□□ -0.61
NVL-222	ENST00000493060	ZBTB3	Q9H5J0	574 aa		11.24	□□□□□ -0.61
NVL-222	ENST00000493060	MYH3	P11055	1940 aa		11.24	□□□□□ -0.61
NVL-222	ENST00000493060	PPP1R3G	B7ZBB8	358 aa		11.23	□□□□□ -0.61
NVL-222	ENST00000493060	NTSR2	O95665	410 aa		11.23	□□□□□ -0.61
NVL-222	ENST00000493060	MYL6B	P14649	208 aa		11.23	□□□□□ -0.61
NVL-222	ENST00000493060	GPT	P24298	496 aa		11.23	□□□□□ -0.61
NVL-222	ENST00000493060	GTF2E1	P29083	439 aa	Predicted RBP	11.23	□□□□□ -0.61
NVL-222	ENST00000493060	MAP3K9	P80192	1104 aa		11.23	□□□□□ -0.61
NVL-222	ENST00000493060	NFE2L2	Q16236	605 aa		11.23	□□□□□ -0.61
NVL-222	ENST00000493060	LRP10	Q7Z4F1	713 aa		11.23	□□□□□ -0.61
NVL-222	ENST00000493060	ZNF34	Q8IZ26	560 aa		11.23	□□□□□ -0.61
NVL-222	ENST00000493060	RRP7A	Q9Y3A4	280 aa	Known RBP	11.23	□□□□□ -0.61
NVL-222	ENST00000493060	GTF3C3	Q9Y5Q9	886 aa		11.23	□□□□□ -0.61
NVL-222	ENST00000493060	ZNF646	O15015	1829 aa	Predicted RBP	11.23	□□□□□ -0.61
NVL-222	ENST00000493060	SUSD4	Q5VX71	490 aa		11.22	□□□□□ -0.61
NVL-222	ENST00000493060	ZBED9	Q6R2W3	1325 aa		11.22	□□□□□ -0.61
NVL-222	ENST00000493060	KIF6	Q6ZMV9	814 aa		11.22	□□□□□ -0.61
NVL-222	ENST00000493060	PNMA8A	Q86V59	439 aa	Predicted RBP	11.22	□□□□□ -0.61
NVL-222	ENST00000493060	PNISR	Q8TF01	805 aa	Known RBP	11.22	□□□□□ -0.61
NVL-222	ENST00000493060	AKAP11	Q9UKA4	1901 aa		11.22	□□□□□ -0.61
NVL-222	ENST00000493060	TNRC18	O15417	2968 aa	Predicted RBP	11.21	□□□□□ -0.61
NVL-222	ENST00000493060	ERBB4	Q15303	1308 aa		11.21	□□□□□ -0.61
NVL-222	ENST00000493060	RASSF10	A6NK89	507 aa		11.21	□□□□□ -0.61
NVL-222	ENST00000493060	SCNN1D	P51172	638 aa		11.21	□□□□□ -0.61
NVL-222	ENST00000493060	CC2D2B	Q6DHV5	1058 aa		11.21	□□□□□ -0.61
NVL-222	ENST00000493060	GIGYF2	Q6Y7W6	1299 aa	Known RBP	11.21	□□□□□ -0.61
NVL-222	ENST00000493060	CNTROB	Q8N137	903 aa		11.21	□□□□□ -0.61
NVL-222	ENST00000493060	JDP2	Q8WYK2	163 aa		11.21	□□□□□ -0.61
NVL-222	ENST00000493060	RPGR	Q92834	1020 aa	Known RBP	11.21	□□□□□ -0.61
NVL-222	ENST00000493060	CRAMP1	Q96RY5	1269 aa		11.21	□□□□□ -0.61
NVL-222	ENST00000493060	PPEF1	O14829	653 aa	Predicted RBP	11.2	□□□□□ -0.62
NVL-222	ENST00000493060	NEFL	P07196	543 aa		11.2	□□□□□ -0.62
NVL-222	ENST00000493060	EPS15	P42566	896 aa		11.2	□□□□□ -0.62
NVL-222	ENST00000493060	FMR1	Q06787	632 aa	Known RBP eCLIP	11.2	□□□□□ -0.62
NVL-222	ENST00000493060	PDIA6	Q15084	440 aa		11.2	□□□□□ -0.62
NVL-222	ENST00000493060	PROSER3	Q2NL68	480 aa		11.2	□□□□□ -0.62
NVL-222	ENST00000493060	CCDC184	Q52MB2	194 aa		11.2	□□□□□ -0.62
NVL-222	ENST00000493060	NBPF3	Q9H094	633 aa		11.2	□□□□□ -0.62
NVL-222	ENST00000493060	PRDM10	Q9NQV6	1147 aa		11.2	□□□□□ -0.62
NVL-222	ENST00000493060	WBP1L	Q9NX94	342 aa		11.2	□□□□□ -0.62
NVL-222	ENST00000493060	GJA3	Q9Y6H8	435 aa		11.2	□□□□□ -0.62
NVL-222	ENST00000493060	ABCC4	O15439	1325 aa		11.19	□□□□□ -0.62
NVL-222	ENST00000493060	WDR33	Q9C0J8	1336 aa	Known RBP	11.19	□□□□□ -0.62
NVL-222	ENST00000493060	CTCF	P49711	727 aa	Predicted RBP	11.19	□□□□□ -0.62
NVL-222	ENST00000493060	LARGE2	Q8N3Y3	721 aa		11.19	□□□□□ -0.62
NVL-222	ENST00000493060	DDX21	Q9NR30	783 aa	Known RBP eCLIP	11.19	□□□□□ -0.62
NVL-222	ENST00000493060	RABGEF1	Q9UJ41	708 aa		11.19	□□□□□ -0.62
NVL-222	ENST00000493060	GOLGA8CP	A6NN73	597 aa		11.18	□□□□□ -0.62
NVL-222	ENST00000493060	TCERG1	O14776	1098 aa	Known RBP	11.18	□□□□□ -0.62
NVL-222	ENST00000493060	RGS20	O76081	388 aa		11.18	□□□□□ -0.62
NVL-222	ENST00000493060	ANXA1	P04083	346 aa		11.18	□□□□□ -0.62
NVL-222	ENST00000493060	NEFM	P07197	916 aa		11.18	□□□□□ -0.62
NVL-222	ENST00000493060	EIF6	P56537	245 aa	Known RBP	11.18	□□□□□ -0.62
NVL-222	ENST00000493060	WDR43	Q15061	677 aa	Known RBP eCLIP	11.18	□□□□□ -0.62
NVL-222	ENST00000493060	DEFB115	Q30KQ5	88 aa		11.18	□□□□□ -0.62
NVL-222	ENST00000493060	GRIPAP1	Q4V328	841 aa		11.18	□□□□□ -0.62
NVL-222	ENST00000493060	RBM17	Q96I25	401 aa	Known RBP	11.18	□□□□□ -0.62
NVL-222	ENST00000493060	MAPK8IP3	Q9UPT6	1336 aa		11.17	□□□□□ -0.62
NVL-222	ENST00000493060	HSPA8	P11142	646 aa	Known RBP	11.17	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms