RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 EGFRP00533 1210 aa7.43□□□□□ -1.22
HMGB1P36-201ENST00000487709 IGLV1-40P01703 118 aa7.43□□□□□ -1.22
HMGB1P36-201ENST00000487709 WEE1P30291 646 aa7.43□□□□□ -1.22
HMGB1P36-201ENST00000487709 Q6ZS46 218 aa7.43□□□□□ -1.22
HMGB1P36-201ENST00000487709 PPP1R12CQ9BZL4 782 aa7.43□□□□□ -1.22
HMGB1P36-201ENST00000487709 SRA1Q9HD15 236 aaKnown RBP7.43□□□□□ -1.22
HMGB1P36-201ENST00000487709 TIMELESSQ9UNS1 1208 aa7.43□□□□□ -1.22
HMGB1P36-201ENST00000487709 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.42□□□□□ -1.22
HMGB1P36-201ENST00000487709 PROSER2Q86WR7 435 aaPredicted RBP7.42□□□□□ -1.22
HMGB1P36-201ENST00000487709 MAP4K3Q8IVH8 894 aa7.42□□□□□ -1.22
HMGB1P36-201ENST00000487709 DCAF11Q8TEB1 546 aa7.42□□□□□ -1.22
HMGB1P36-201ENST00000487709 UBL7Q96S82 380 aaPredicted RBP7.42□□□□□ -1.22
HMGB1P36-201ENST00000487709 VRTNQ9H8Y1 702 aa7.42□□□□□ -1.22
HMGB1P36-201ENST00000487709 STOML1Q9UBI4 398 aa7.42□□□□□ -1.22
HMGB1P36-201ENST00000487709 KCNMB2Q9Y691 235 aa7.42□□□□□ -1.22
HMGB1P36-201ENST00000487709 OAS3Q9Y6K5 1087 aaKnown RBP7.42□□□□□ -1.22
HMGB1P36-201ENST00000487709 KRTAP4-8A0A0G2JLE6 195 aa7.41□□□□□ -1.22
HMGB1P36-201ENST00000487709 GSC2O15499 205 aa7.41□□□□□ -1.22
HMGB1P36-201ENST00000487709 COBLO75128 1261 aa7.41□□□□□ -1.22
HMGB1P36-201ENST00000487709 LMOD1P29536 600 aaPredicted RBP7.41□□□□□ -1.22
HMGB1P36-201ENST00000487709 TXKP42681 527 aa7.41□□□□□ -1.22
HMGB1P36-201ENST00000487709 TXNDC11Q6PKC3 985 aa7.41□□□□□ -1.22
HMGB1P36-201ENST00000487709 CALR3Q96L12 384 aaKnown RBP7.41□□□□□ -1.22
HMGB1P36-201ENST00000487709 ARXQ96QS3 562 aa7.41□□□□□ -1.22
HMGB1P36-201ENST00000487709 PPME1Q9Y570 386 aa7.41□□□□□ -1.22
HMGB1P36-201ENST00000487709 LINC01387J3KSC0 135 aa7.4□□□□□ -1.22
HMGB1P36-201ENST00000487709 WISP1O95388 367 aa7.4□□□□□ -1.22
HMGB1P36-201ENST00000487709 CDC25BP30305 580 aa7.4□□□□□ -1.22
HMGB1P36-201ENST00000487709 SOX18P35713 384 aa7.4□□□□□ -1.22
HMGB1P36-201ENST00000487709 GP2P55259 537 aaKnown RBP7.4□□□□□ -1.22
HMGB1P36-201ENST00000487709 ACAD11Q709F0 780 aa7.4□□□□□ -1.22
HMGB1P36-201ENST00000487709 GALNT11Q8NCW6 608 aa7.4□□□□□ -1.22
HMGB1P36-201ENST00000487709 LACRTQ9GZZ8 138 aa7.4□□□□□ -1.22
HMGB1P36-201ENST00000487709 KIAA1324LA8MWY0 1029 aaPredicted RBP7.39□□□□□ -1.23
HMGB1P36-201ENST00000487709 DHX15O43143 795 aaKnown RBP7.39□□□□□ -1.23
HMGB1P36-201ENST00000487709 TAL1P17542 331 aaPredicted RBP7.39□□□□□ -1.23
HMGB1P36-201ENST00000487709 HOXD8P13378 290 aaPredicted RBP7.38□□□□□ -1.23
HMGB1P36-201ENST00000487709 TRIP4Q15650 581 aaPredicted RBP7.38□□□□□ -1.23
HMGB1P36-201ENST00000487709 COX20Q5RI15 118 aa7.38□□□□□ -1.23
HMGB1P36-201ENST00000487709 ARMC10Q8N2F6 343 aa7.38□□□□□ -1.23
HMGB1P36-201ENST00000487709 FNBP4Q8N3X1 1017 aaPredicted RBP7.38□□□□□ -1.23
HMGB1P36-201ENST00000487709 UTP4Q969X6 686 aaKnown RBP7.38□□□□□ -1.23
HMGB1P36-201ENST00000487709 CARD10Q9BWT7 1032 aa7.38□□□□□ -1.23
HMGB1P36-201ENST00000487709 MUC3BQ9H195 1237 aa7.38□□□□□ -1.23
HMGB1P36-201ENST00000487709 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.38□□□□□ -1.23
HMGB1P36-201ENST00000487709 ATP11AP98196 1134 aa7.37□□□□□ -1.23
HMGB1P36-201ENST00000487709 FKBP5Q13451 457 aaPredicted RBP7.37□□□□□ -1.23
HMGB1P36-201ENST00000487709 NLRP13Q86W25 1043 aa7.37□□□□□ -1.23
HMGB1P36-201ENST00000487709 ZDHHC13Q8IUH4 622 aa7.37□□□□□ -1.23
HMGB1P36-201ENST00000487709 ETFBKMTQ8IXQ9 262 aa7.37□□□□□ -1.23
HMGB1P36-201ENST00000487709 FMNL2Q96PY5 1086 aa7.37□□□□□ -1.23
HMGB1P36-201ENST00000487709 CEP41Q9BYV8 373 aa7.37□□□□□ -1.23
HMGB1P36-201ENST00000487709 C7orf69Q9H7B7 122 aa7.37□□□□□ -1.23
HMGB1P36-201ENST00000487709 KCNK4Q9NYG8 393 aa7.37□□□□□ -1.23
HMGB1P36-201ENST00000487709 ADAMTS4O75173 837 aa7.36□□□□□ -1.23
HMGB1P36-201ENST00000487709 CD68P34810 354 aaPredicted RBP7.36□□□□□ -1.23
HMGB1P36-201ENST00000487709 NFIAQ12857 509 aa7.36□□□□□ -1.23
HMGB1P36-201ENST00000487709 COL13A1Q5TAT6 717 aaPredicted RBP7.36□□□□□ -1.23
HMGB1P36-201ENST00000487709 TRIM42Q8IWZ5 723 aa7.36□□□□□ -1.23
HMGB1P36-201ENST00000487709 FAM200AQ8TCP9 573 aa7.36□□□□□ -1.23
HMGB1P36-201ENST00000487709 RNF114Q9Y508 228 aa7.36□□□□□ -1.23
HMGB1P36-201ENST00000487709 HMX2A2RU54 273 aa7.35□□□□□ -1.23
HMGB1P36-201ENST00000487709 UBAP1LF5GYI3 381 aa7.35□□□□□ -1.23
HMGB1P36-201ENST00000487709 YBX3P16989 372 aaKnown RBP eCLIP7.35□□□□□ -1.23
HMGB1P36-201ENST00000487709 CEP135Q66GS9 1140 aa7.35□□□□□ -1.23
HMGB1P36-201ENST00000487709 CACTIN-AS1Q8N1I8 211 aa7.35□□□□□ -1.23
HMGB1P36-201ENST00000487709 PRIMPOLQ96LW4 560 aa7.35□□□□□ -1.23
HMGB1P36-201ENST00000487709 SPINK2P20155 84 aa7.34□□□□□ -1.23
HMGB1P36-201ENST00000487709 CDC27P30260 824 aa7.34□□□□□ -1.23
HMGB1P36-201ENST00000487709 GRIK1P39086 918 aa7.34□□□□□ -1.23
HMGB1P36-201ENST00000487709 CDCA8Q53HL2 280 aa7.34□□□□□ -1.23
HMGB1P36-201ENST00000487709 SPACA7Q96KW9 195 aa7.34□□□□□ -1.23
HMGB1P36-201ENST00000487709 SAP130Q9H0E3 1048 aa7.34□□□□□ -1.23
HMGB1P36-201ENST00000487709 A6NJR5 290 aa7.33□□□□□ -1.24
HMGB1P36-201ENST00000487709 SMNDC1O75940 238 aaKnown RBP eCLIP7.33□□□□□ -1.24
HMGB1P36-201ENST00000487709 HYAL2Q12891 473 aa7.33□□□□□ -1.24
HMGB1P36-201ENST00000487709 DUOXA2Q1HG44 320 aa7.33□□□□□ -1.24
HMGB1P36-201ENST00000487709 UVSSAQ2YD98 709 aa7.33□□□□□ -1.24
HMGB1P36-201ENST00000487709 OR13H1Q8NG92 308 aa7.33□□□□□ -1.24
HMGB1P36-201ENST00000487709 DDX3YO15523 660 aaKnown RBP7.32□□□□□ -1.24
HMGB1P36-201ENST00000487709 PRMT3O60678 531 aa7.32□□□□□ -1.24
HMGB1P36-201ENST00000487709 SCNN1AP37088 669 aa7.32□□□□□ -1.24
HMGB1P36-201ENST00000487709 FAM26DQ5JW98 314 aa7.32□□□□□ -1.24
HMGB1P36-201ENST00000487709 RNF43Q68DV7 783 aa7.32□□□□□ -1.24
HMGB1P36-201ENST00000487709 ADAMTSL4Q6UY14 1074 aa7.32□□□□□ -1.24
HMGB1P36-201ENST00000487709 KIAA1211Q6ZU35 1233 aa7.32□□□□□ -1.24
HMGB1P36-201ENST00000487709 UBASH3BQ8TF42 649 aa7.32□□□□□ -1.24
HMGB1P36-201ENST00000487709 FAM46AQ96IP4 442 aaKnown RBP7.32□□□□□ -1.24
HMGB1P36-201ENST00000487709 MYRFLQ96LU7 910 aa7.32□□□□□ -1.24
HMGB1P36-201ENST00000487709 DBNDD2Q9BQY9 259 aa7.32□□□□□ -1.24
HMGB1P36-201ENST00000487709 ZMYND15Q9H091 742 aa7.32□□□□□ -1.24
HMGB1P36-201ENST00000487709 RASSF4Q9H2L5 321 aa7.32□□□□□ -1.24
HMGB1P36-201ENST00000487709 FSCN2O14926 492 aa7.31□□□□□ -1.24
HMGB1P36-201ENST00000487709 RFX1P22670 979 aa7.31□□□□□ -1.24
HMGB1P36-201ENST00000487709 BRD2P25440 801 aaKnown RBP7.31□□□□□ -1.24
HMGB1P36-201ENST00000487709 FAM117BQ6P1L5 589 aa7.31□□□□□ -1.24
HMGB1P36-201ENST00000487709 C16orf46Q6P387 395 aa7.31□□□□□ -1.24
HMGB1P36-201ENST00000487709 INTS5Q6P9B9 1019 aaKnown RBP7.31□□□□□ -1.24
HMGB1P36-201ENST00000487709 FOXD4L4Q8WXT5 416 aaPredicted RBP7.31□□□□□ -1.24
HMGB1P36-201ENST00000487709 KCNF1Q9H3M0 494 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms