RNA–Protein interactions for RNA: ENST00000479099.2

RC3H1-204, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-204ENST00000479099 PCGF6Q9BYE7 350 aa7.71□□□□□ -1.18
RC3H1-204ENST00000479099 NDFIP2Q9NV92 336 aa7.71□□□□□ -1.18
RC3H1-204ENST00000479099 TMEM229AB2RXF0 380 aa7.7□□□□□ -1.18
RC3H1-204ENST00000479099 K7ELQ4 463 aaPredicted RBP7.7□□□□□ -1.18
RC3H1-204ENST00000479099 PPP1R12AO14974 1030 aaPredicted RBP7.7□□□□□ -1.18
RC3H1-204ENST00000479099 TREHO43280 583 aa7.7□□□□□ -1.18
RC3H1-204ENST00000479099 PRMT3O60678 531 aa7.7□□□□□ -1.18
RC3H1-204ENST00000479099 FGRP09769 529 aa7.7□□□□□ -1.18
RC3H1-204ENST00000479099 MCCP23508 829 aa7.7□□□□□ -1.18
RC3H1-204ENST00000479099 AMPD3Q01432 767 aa7.7□□□□□ -1.18
RC3H1-204ENST00000479099 NCOA4Q13772 614 aa7.7□□□□□ -1.18
RC3H1-204ENST00000479099 SUZ12Q15022 739 aaKnown RBP7.7□□□□□ -1.18
RC3H1-204ENST00000479099 EML3Q32P44 896 aa7.7□□□□□ -1.18
RC3H1-204ENST00000479099 PLEKHG4Q58EX7 1191 aa7.7□□□□□ -1.18
RC3H1-204ENST00000479099 FIGNL1Q6PIW4 674 aa7.7□□□□□ -1.18
RC3H1-204ENST00000479099 ABHD17AQ96GS6 310 aa7.7□□□□□ -1.18
RC3H1-204ENST00000479099 SCYL1Q96KG9 808 aa7.7□□□□□ -1.18
RC3H1-204ENST00000479099 C8orf48Q96LL4 319 aa7.7□□□□□ -1.18
RC3H1-204ENST00000479099 SLC4A9Q96Q91 983 aa7.7□□□□□ -1.18
RC3H1-204ENST00000479099 DUSP9Q99956 384 aaKnown RBP7.7□□□□□ -1.18
RC3H1-204ENST00000479099 VTI1BQ9UEU0 232 aa7.7□□□□□ -1.18
RC3H1-204ENST00000479099 COMMD10Q9Y6G5 202 aa7.7□□□□□ -1.18
RC3H1-204ENST00000479099 BNIP3LO60238 219 aa7.69□□□□□ -1.18
RC3H1-204ENST00000479099 LDHBP07195 334 aaKnown RBP7.69□□□□□ -1.18
RC3H1-204ENST00000479099 BMP4P12644 408 aa7.69□□□□□ -1.18
RC3H1-204ENST00000479099 ATP4AP20648 1035 aa7.69□□□□□ -1.18
RC3H1-204ENST00000479099 FGFR3P22607 806 aa7.69□□□□□ -1.18
RC3H1-204ENST00000479099 MTFR1Q15390 333 aa7.69□□□□□ -1.18
RC3H1-204ENST00000479099 NLRP8Q86W28 1048 aa7.69□□□□□ -1.18
RC3H1-204ENST00000479099 VPS37DQ86XT2 251 aa7.69□□□□□ -1.18
RC3H1-204ENST00000479099 CNPY4Q8N129 248 aa7.69□□□□□ -1.18
RC3H1-204ENST00000479099 GOLGA6L1Q8N7Z2 621 aa7.69□□□□□ -1.18
RC3H1-204ENST00000479099 GALNT6Q8NCL4 622 aa7.69□□□□□ -1.18
RC3H1-204ENST00000479099 SENP7Q9BQF6 1050 aa7.69□□□□□ -1.18
RC3H1-204ENST00000479099 QTRT2Q9H974 415 aaKnown RBP7.69□□□□□ -1.18
RC3H1-204ENST00000479099 SERTAD1Q9UHV2 236 aa7.69□□□□□ -1.18
RC3H1-204ENST00000479099 A6NJY4 79 aa7.68□□□□□ -1.18
RC3H1-204ENST00000479099 CDK2AP1O14519 115 aa7.68□□□□□ -1.18
RC3H1-204ENST00000479099 WDHD1O75717 1129 aaPredicted RBP7.68□□□□□ -1.18
RC3H1-204ENST00000479099 SERINC3Q13530 473 aa7.68□□□□□ -1.18
RC3H1-204ENST00000479099 NBPF1Q3BBV0 1214 aa7.68□□□□□ -1.18
RC3H1-204ENST00000479099 NBPF6Q5VWK0 638 aa7.68□□□□□ -1.18
RC3H1-204ENST00000479099 CCSAPQ6IQ19 270 aaPredicted RBP7.68□□□□□ -1.18
RC3H1-204ENST00000479099 ZNF295-AS1Q8N0V1 137 aa7.68□□□□□ -1.18
RC3H1-204ENST00000479099 OGFOD1Q8N543 542 aa7.68□□□□□ -1.18
RC3H1-204ENST00000479099 MKL1Q969V6 931 aa7.68□□□□□ -1.18
RC3H1-204ENST00000479099 RELTQ969Z4 430 aa7.68□□□□□ -1.18
RC3H1-204ENST00000479099 AIDAQ96BJ3 306 aa7.68□□□□□ -1.18
RC3H1-204ENST00000479099 DCAF5Q96JK2 942 aa7.68□□□□□ -1.18
RC3H1-204ENST00000479099 RNPC3Q96LT9 517 aaKnown RBP7.68□□□□□ -1.18
RC3H1-204ENST00000479099 NBPF4Q96M43 638 aa7.68□□□□□ -1.18
RC3H1-204ENST00000479099 DNAAF2Q9NVR5 837 aaKnown RBP7.68□□□□□ -1.18
RC3H1-204ENST00000479099 DDX41Q9UJV9 622 aaKnown RBP7.68□□□□□ -1.18
RC3H1-204ENST00000479099 NOD1Q9Y239 953 aa7.68□□□□□ -1.18
RC3H1-204ENST00000479099 PCDHGA11Q9Y5H2 935 aa7.68□□□□□ -1.18
RC3H1-204ENST00000479099 SHISA8B8ZZ34 492 aa7.67□□□□□ -1.18
RC3H1-204ENST00000479099 EXOC5O00471 708 aa7.67□□□□□ -1.18
RC3H1-204ENST00000479099 C2CD2LO14523 706 aa7.67□□□□□ -1.18
RC3H1-204ENST00000479099 VIL1P09327 827 aaKnown RBP7.67□□□□□ -1.18
RC3H1-204ENST00000479099 PSMD2Q13200 908 aa7.67□□□□□ -1.18
RC3H1-204ENST00000479099 UBE4AQ14139 1066 aa7.67□□□□□ -1.18
RC3H1-204ENST00000479099 C1orf229Q6ZS94 237 aaPredicted RBP7.67□□□□□ -1.18
RC3H1-204ENST00000479099 ZNF654Q8IZM8 581 aa7.67□□□□□ -1.18
RC3H1-204ENST00000479099 EDARADDQ8WWZ3 215 aa7.67□□□□□ -1.18
RC3H1-204ENST00000479099 PRIMPOLQ96LW4 560 aa7.67□□□□□ -1.18
RC3H1-204ENST00000479099 ZCCHC2Q9C0B9 1178 aaKnown RBP7.67□□□□□ -1.18
RC3H1-204ENST00000479099 PCDHGC4Q9Y5F7 938 aa7.67□□□□□ -1.18
RC3H1-204ENST00000479099 BACH1O14867 736 aa7.66□□□□□ -1.18
RC3H1-204ENST00000479099 TATP17735 454 aaPredicted RBP7.66□□□□□ -1.18
RC3H1-204ENST00000479099 EVA1CP58658 441 aa7.66□□□□□ -1.18
RC3H1-204ENST00000479099 CTBSQ01459 385 aa7.66□□□□□ -1.18
RC3H1-204ENST00000479099 DSC3Q14574 896 aa7.66□□□□□ -1.18
RC3H1-204ENST00000479099 ODR4Q5SWX8 454 aa7.66□□□□□ -1.18
RC3H1-204ENST00000479099 SLCO4C1Q6ZQN7 724 aa7.66□□□□□ -1.18
RC3H1-204ENST00000479099 ZDHHC3Q9NYG2 299 aa7.66□□□□□ -1.18
RC3H1-204ENST00000479099 SEPT3Q9UH03 358 aa7.66□□□□□ -1.18
RC3H1-204ENST00000479099 MKL2Q9ULH7 1088 aa7.66□□□□□ -1.18
RC3H1-204ENST00000479099 TTF2Q9UNY4 1162 aaKnown RBP7.66□□□□□ -1.18
RC3H1-204ENST00000479099 LOC100996750A0A140TA64 210 aa7.65□□□□□ -1.18
RC3H1-204ENST00000479099 A0A1W2PNR3 127 aa7.65□□□□□ -1.18
RC3H1-204ENST00000479099 ATXN7O15265 892 aaPredicted RBP7.65□□□□□ -1.18
RC3H1-204ENST00000479099 DKK1O94907 266 aa7.65□□□□□ -1.18
RC3H1-204ENST00000479099 SNRPNP63162 240 aaKnown RBP7.65□□□□□ -1.18
RC3H1-204ENST00000479099 RACK1P63244 317 aaKnown RBP7.65□□□□□ -1.18
RC3H1-204ENST00000479099 GTF2IP78347 998 aa7.65□□□□□ -1.18
RC3H1-204ENST00000479099 CLDN10P78369 228 aa7.65□□□□□ -1.18
RC3H1-204ENST00000479099 MTMR3Q13615 1198 aa7.65□□□□□ -1.18
RC3H1-204ENST00000479099 PLA2G4EQ3MJ16 856 aa7.65□□□□□ -1.18
RC3H1-204ENST00000479099 ARSJQ5FYB0 599 aaPredicted RBP7.65□□□□□ -1.18
RC3H1-204ENST00000479099 PRPF38AQ8NAV1 312 aaKnown RBP7.65□□□□□ -1.18
RC3H1-204ENST00000479099 ZNF594Q96JF6 807 aaPredicted RBP7.65□□□□□ -1.18
RC3H1-204ENST00000479099 KRTAP4-6Q9BYQ5 205 aa7.65□□□□□ -1.18
RC3H1-204ENST00000479099 RNF19AQ9NV58 838 aa7.65□□□□□ -1.18
RC3H1-204ENST00000479099 CABP1Q9NZU7 370 aa7.65□□□□□ -1.18
RC3H1-204ENST00000479099 TCEAL9Q9UHQ7 104 aa7.65□□□□□ -1.18
RC3H1-204ENST00000479099 GGA1Q9UJY5 639 aa7.65□□□□□ -1.18
RC3H1-204ENST00000479099 CCDC189A1A4V9 331 aa7.64□□□□□ -1.19
RC3H1-204ENST00000479099 ARAFP10398 606 aa7.64□□□□□ -1.19
RC3H1-204ENST00000479099 GYS2P54840 703 aa7.64□□□□□ -1.19
RC3H1-204ENST00000479099 WDR78Q5VTH9 848 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms