RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 FGD5Q6ZNL6 1462 aa7.69□□□□□ -1.18
RTF1-203ENST00000473214 FAM196BA6NMK8 535 aa7.69□□□□□ -1.18
RTF1-203ENST00000473214 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.69□□□□□ -1.18
RTF1-203ENST00000473214 PPP1R12AO14974 1030 aaPredicted RBP7.69□□□□□ -1.18
RTF1-203ENST00000473214 BDNFP23560 247 aa7.69□□□□□ -1.18
RTF1-203ENST00000473214 FANCCQ00597 558 aa7.69□□□□□ -1.18
RTF1-203ENST00000473214 LMOD3Q0VAK6 560 aa7.69□□□□□ -1.18
RTF1-203ENST00000473214 NFE2L2Q16236 605 aa7.69□□□□□ -1.18
RTF1-203ENST00000473214 CFHR5Q9BXR6 569 aa7.69□□□□□ -1.18
RTF1-203ENST00000473214 OXCT2Q9BYC2 517 aaPredicted RBP7.69□□□□□ -1.18
RTF1-203ENST00000473214 ARHGEF10LQ9HCE6 1279 aa7.69□□□□□ -1.18
RTF1-203ENST00000473214 JADE2Q9NQC1 790 aa7.69□□□□□ -1.18
RTF1-203ENST00000473214 METTL5Q9NRN9 209 aaKnown RBP7.69□□□□□ -1.18
RTF1-203ENST00000473214 GEMIN8Q9NWZ8 242 aaKnown RBP7.69□□□□□ -1.18
RTF1-203ENST00000473214 WDR97A6NE52 1622 aa7.69□□□□□ -1.18
RTF1-203ENST00000473214 PBRM1Q86U86 1689 aa7.69□□□□□ -1.18
RTF1-203ENST00000473214 GRIN2BQ13224 1484 aa7.68□□□□□ -1.18
RTF1-203ENST00000473214 USP17L3A6NCW0 530 aa7.68□□□□□ -1.18
RTF1-203ENST00000473214 USP17L4A6NCW7 530 aa7.68□□□□□ -1.18
RTF1-203ENST00000473214 ZNF500O60304 480 aaPredicted RBP7.68□□□□□ -1.18
RTF1-203ENST00000473214 ICMTO60725 284 aa7.68□□□□□ -1.18
RTF1-203ENST00000473214 P4HBP07237 508 aaKnown RBP7.68□□□□□ -1.18
RTF1-203ENST00000473214 PDGFRBP09619 1106 aa7.68□□□□□ -1.18
RTF1-203ENST00000473214 XRCC5P13010 732 aaKnown RBP7.68□□□□□ -1.18
RTF1-203ENST00000473214 COL8A1P27658 744 aa7.68□□□□□ -1.18
RTF1-203ENST00000473214 MAP2K3P46734 347 aa7.68□□□□□ -1.18
RTF1-203ENST00000473214 NR1H3Q13133 447 aa7.68□□□□□ -1.18
RTF1-203ENST00000473214 SAFB2Q14151 953 aaKnown RBP eCLIP7.68□□□□□ -1.18
RTF1-203ENST00000473214 CRTC2Q53ET0 693 aaPredicted RBP7.68□□□□□ -1.18
RTF1-203ENST00000473214 ODR4Q5SWX8 454 aa7.68□□□□□ -1.18
RTF1-203ENST00000473214 USP17L2Q6R6M4 530 aa7.68□□□□□ -1.18
RTF1-203ENST00000473214 USP17L1Q7RTZ2 530 aa7.68□□□□□ -1.18
RTF1-203ENST00000473214 ALYREFQ86V81 257 aaKnown RBP7.68□□□□□ -1.18
RTF1-203ENST00000473214 PPARGC1BQ86YN6 1023 aaKnown RBP7.68□□□□□ -1.18
RTF1-203ENST00000473214 KRTAP9-2Q9BYQ4 174 aa7.68□□□□□ -1.18
RTF1-203ENST00000473214 SWAP70Q9UH65 585 aa7.68□□□□□ -1.18
RTF1-203ENST00000473214 MKL2Q9ULH7 1088 aa7.68□□□□□ -1.18
RTF1-203ENST00000473214 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.68□□□□□ -1.18
RTF1-203ENST00000473214 KDM6BO15054 1643 aa7.67□□□□□ -1.18
RTF1-203ENST00000473214 SHISA8B8ZZ34 492 aa7.67□□□□□ -1.18
RTF1-203ENST00000473214 ZNF76P36508 570 aa7.67□□□□□ -1.18
RTF1-203ENST00000473214 EVA1CP58658 441 aa7.67□□□□□ -1.18
RTF1-203ENST00000473214 LARP1Q6PKG0 1096 aaKnown RBP7.67□□□□□ -1.18
RTF1-203ENST00000473214 RINLQ6ZS11 566 aa7.67□□□□□ -1.18
RTF1-203ENST00000473214 RGL4Q8IZJ4 473 aa7.67□□□□□ -1.18
RTF1-203ENST00000473214 FAM161BQ96MY7 647 aa7.67□□□□□ -1.18
RTF1-203ENST00000473214 NAP1L4Q99733 375 aaKnown RBP7.67□□□□□ -1.18
RTF1-203ENST00000473214 INPP5FQ9Y2H2 1132 aa7.67□□□□□ -1.18
RTF1-203ENST00000473214 PCDHB11Q9Y5F2 797 aa7.67□□□□□ -1.18
RTF1-203ENST00000473214 ENPP3O14638 875 aa7.66□□□□□ -1.18
RTF1-203ENST00000473214 GNRH1P01148 92 aa7.66□□□□□ -1.18
RTF1-203ENST00000473214 PDE3BQ13370 1112 aa7.66□□□□□ -1.18
RTF1-203ENST00000473214 UBE4AQ14139 1066 aa7.66□□□□□ -1.18
RTF1-203ENST00000473214 C1orf229Q6ZS94 237 aaPredicted RBP7.66□□□□□ -1.18
RTF1-203ENST00000473214 ESYT1Q9BSJ8 1104 aa7.66□□□□□ -1.18
RTF1-203ENST00000473214 HRH3Q9Y5N1 445 aa7.66□□□□□ -1.18
RTF1-203ENST00000473214 ADGRL1O94910 1474 aa7.66□□□□□ -1.18
RTF1-203ENST00000473214 CUX1P39880 1505 aa7.66□□□□□ -1.18
RTF1-203ENST00000473214 DIP2BQ9P265 1576 aa7.66□□□□□ -1.18
RTF1-203ENST00000473214 PIK3CDO00329 1044 aa7.65□□□□□ -1.18
RTF1-203ENST00000473214 IL2RAP01589 272 aa7.65□□□□□ -1.18
RTF1-203ENST00000473214 HSP90AA1P07900 732 aaKnown RBP7.65□□□□□ -1.18
RTF1-203ENST00000473214 EIF4G2P78344 907 aaKnown RBP eCLIP7.65□□□□□ -1.18
RTF1-203ENST00000473214 UBAP2LQ14157 1087 aaKnown RBP7.65□□□□□ -1.18
RTF1-203ENST00000473214 SLFNL1Q499Z3 407 aa7.65□□□□□ -1.18
RTF1-203ENST00000473214 ZNF280DQ6N043 979 aa7.65□□□□□ -1.18
RTF1-203ENST00000473214 CNKSR1Q969H4 720 aa7.65□□□□□ -1.18
RTF1-203ENST00000473214 KLRG1Q96E93 195 aa7.65□□□□□ -1.18
RTF1-203ENST00000473214 C8orf48Q96LL4 319 aa7.65□□□□□ -1.18
RTF1-203ENST00000473214 CLSPNQ9HAW4 1339 aa7.65□□□□□ -1.18
RTF1-203ENST00000473214 VTI1BQ9UEU0 232 aa7.65□□□□□ -1.18
RTF1-203ENST00000473214 SFMBT1Q9UHJ3 866 aa7.65□□□□□ -1.18
RTF1-203ENST00000473214 TTF2Q9UNY4 1162 aaKnown RBP7.65□□□□□ -1.18
RTF1-203ENST00000473214 TSPOAP1O95153 1857 aa7.64□□□□□ -1.19
RTF1-203ENST00000473214 SHROOM2Q13796 1616 aa7.64□□□□□ -1.19
RTF1-203ENST00000473214 ABCC10Q5T3U5 1492 aa7.64□□□□□ -1.19
RTF1-203ENST00000473214 KRTAP9-6A0A140TA67 174 aa7.64□□□□□ -1.19
RTF1-203ENST00000473214 CALRP27797 417 aaKnown RBP7.64□□□□□ -1.19
RTF1-203ENST00000473214 ITGAEP38570 1179 aa7.64□□□□□ -1.19
RTF1-203ENST00000473214 AMPD3Q01432 767 aa7.64□□□□□ -1.19
RTF1-203ENST00000473214 CENPCQ03188 943 aa7.64□□□□□ -1.19
RTF1-203ENST00000473214 MAP9Q49MG5 647 aa7.64□□□□□ -1.19
RTF1-203ENST00000473214 C1orf216Q8TAB5 229 aa7.64□□□□□ -1.19
RTF1-203ENST00000473214 SECISBP2LQ93073 1101 aaKnown RBP7.64□□□□□ -1.19
RTF1-203ENST00000473214 IL17RAQ96F46 866 aa7.64□□□□□ -1.19
RTF1-203ENST00000473214 RAB6BQ9NRW1 208 aa7.64□□□□□ -1.19
RTF1-203ENST00000473214 PRKAB1Q9Y478 270 aa7.64□□□□□ -1.19
RTF1-203ENST00000473214 A0A1B0GTH6 734 aa7.63□□□□□ -1.19
RTF1-203ENST00000473214 USP17L5A8MUK1 530 aa7.63□□□□□ -1.19
RTF1-203ENST00000473214 C21orf2O43822 256 aa7.63□□□□□ -1.19
RTF1-203ENST00000473214 SKIP12755 728 aa7.63□□□□□ -1.19
RTF1-203ENST00000473214 RASA1P20936 1047 aa7.63□□□□□ -1.19
RTF1-203ENST00000473214 PTK7Q13308 1070 aa7.63□□□□□ -1.19
RTF1-203ENST00000473214 DEPDC4Q8N2C3 294 aa7.63□□□□□ -1.19
RTF1-203ENST00000473214 FRMD6Q96NE9 622 aa7.63□□□□□ -1.19
RTF1-203ENST00000473214 SLKQ9H2G2 1235 aaPredicted RBP7.63□□□□□ -1.19
RTF1-203ENST00000473214 ESF1Q9H501 851 aaKnown RBP7.63□□□□□ -1.19
RTF1-203ENST00000473214 RRAGCQ9HB90 399 aa7.63□□□□□ -1.19
RTF1-203ENST00000473214 GPAMQ9HCL2 828 aa7.63□□□□□ -1.19
RTF1-203ENST00000473214 TYW1Q9NV66 732 aaKnown RBP7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms