RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 F13A1P00488 732 aa18.18■□□□□ 0.5
LMNB1-203ENST00000460265 MCMDC2Q4G0Z9 681 aa18.18■□□□□ 0.5
LMNB1-203ENST00000460265 VPS53Q5VIR6 699 aa18.18■□□□□ 0.5
LMNB1-203ENST00000460265 Q6ZUG5 572 aa18.18■□□□□ 0.5
LMNB1-203ENST00000460265 PAG1Q9NWQ8 432 aa18.18■□□□□ 0.5
LMNB1-203ENST00000460265 TAF6LQ9Y6J9 622 aa18.18■□□□□ 0.5
LMNB1-203ENST00000460265 ANKRD1Q15327 319 aa18.18■□□□□ 0.5
LMNB1-203ENST00000460265 EXOC5O00471 708 aa18.17■□□□□ 0.5
LMNB1-203ENST00000460265 PIP4K2BP78356 416 aa18.17■□□□□ 0.5
LMNB1-203ENST00000460265 PRIMPOLQ96LW4 560 aa18.17■□□□□ 0.5
LMNB1-203ENST00000460265 COPRSQ9NQ92 184 aa18.17■□□□□ 0.5
LMNB1-203ENST00000460265 PDCP20941 246 aa18.17■□□□□ 0.5
LMNB1-203ENST00000460265 KRT85P78386 507 aa18.17■□□□□ 0.5
LMNB1-203ENST00000460265 LRSAM1Q6UWE0 723 aa18.17■□□□□ 0.5
LMNB1-203ENST00000460265 PAXIP1Q6ZW49 1069 aaPredicted RBP18.17■□□□□ 0.5
LMNB1-203ENST00000460265 ZNF830Q96NB3 372 aaPredicted RBP18.17■□□□□ 0.5
LMNB1-203ENST00000460265 CYP2E1P05181 493 aaPredicted RBP18.17■□□□□ 0.5
LMNB1-203ENST00000460265 HCLS1P14317 486 aaPredicted RBP18.17■□□□□ 0.5
LMNB1-203ENST00000460265 ZNF710Q8N1W2 664 aa18.17■□□□□ 0.5
LMNB1-203ENST00000460265 IL15P40933 162 aaPredicted RBP18.16■□□□□ 0.5
LMNB1-203ENST00000460265 MAP4K1Q92918 833 aa18.16■□□□□ 0.5
LMNB1-203ENST00000460265 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.16■□□□□ 0.5
LMNB1-203ENST00000460265 WDR17Q8IZU2 1322 aa18.16■□□□□ 0.5
LMNB1-203ENST00000460265 TOPAZ1Q8N9V7 1692 aa18.16■□□□□ 0.5
LMNB1-203ENST00000460265 CPLX1O14810 134 aa18.15■□□□□ 0.5
LMNB1-203ENST00000460265 CKAP2LQ8IYA6 745 aa18.15■□□□□ 0.5
LMNB1-203ENST00000460265 GNL2Q13823 731 aaKnown RBP18.15■□□□□ 0.5
LMNB1-203ENST00000460265 RALYLQ86SE5 291 aaKnown RBP18.15■□□□□ 0.5
LMNB1-203ENST00000460265 SPATA32Q96LK8 384 aa18.15■□□□□ 0.5
LMNB1-203ENST00000460265 EYA2O00167 538 aa18.15■□□□□ 0.5
LMNB1-203ENST00000460265 JAK2O60674 1132 aa18.15■□□□□ 0.5
LMNB1-203ENST00000460265 ATP5JP18859 108 aa18.15■□□□□ 0.5
LMNB1-203ENST00000460265 KRT32Q14532 448 aa18.15■□□□□ 0.5
LMNB1-203ENST00000460265 NECTIN1Q15223 517 aa18.15■□□□□ 0.5
LMNB1-203ENST00000460265 ZSWIM6Q9HCJ5 1215 aa18.15■□□□□ 0.5
LMNB1-203ENST00000460265 USP25Q9UHP3 1055 aa18.15■□□□□ 0.5
LMNB1-203ENST00000460265 MEGF6O75095 1541 aa18.14■□□□□ 0.49
LMNB1-203ENST00000460265 SF3A1Q15459 793 aaKnown RBP18.14■□□□□ 0.49
LMNB1-203ENST00000460265 ZRSR1Q15695 479 aaKnown RBP18.14■□□□□ 0.49
LMNB1-203ENST00000460265 U3KPZ7 1027 aaPredicted RBP18.14■□□□□ 0.49
LMNB1-203ENST00000460265 COL9A3Q14050 684 aaPredicted RBP18.14■□□□□ 0.49
LMNB1-203ENST00000460265 BICDL1Q6ZP65 573 aa18.14■□□□□ 0.49
LMNB1-203ENST00000460265 TAF5LO75529 589 aa18.13■□□□□ 0.49
LMNB1-203ENST00000460265 U2AF2P26368 475 aaKnown RBP eCLIP18.13■□□□□ 0.49
LMNB1-203ENST00000460265 APOBRQ0VD83 1088 aa18.13■□□□□ 0.49
LMNB1-203ENST00000460265 SPC24Q8NBT2 197 aa18.13■□□□□ 0.49
LMNB1-203ENST00000460265 NWD1Q149M9 1564 aa18.13■□□□□ 0.49
LMNB1-203ENST00000460265 FMN2Q9NZ56 1722 aa18.13■□□□□ 0.49
LMNB1-203ENST00000460265 NCAPD2Q15021 1401 aa18.13■□□□□ 0.49
LMNB1-203ENST00000460265 RPS6KB1P23443 525 aa18.13■□□□□ 0.49
LMNB1-203ENST00000460265 CHAF1AQ13111 956 aaPredicted RBP18.13■□□□□ 0.49
LMNB1-203ENST00000460265 TTLL5Q6EMB2 1281 aa18.13■□□□□ 0.49
LMNB1-203ENST00000460265 PI16Q6UXB8 463 aa18.13■□□□□ 0.49
LMNB1-203ENST00000460265 CDC37L1Q7L3B6 337 aa18.13■□□□□ 0.49
LMNB1-203ENST00000460265 CCDC191Q8NCU4 936 aa18.13■□□□□ 0.49
LMNB1-203ENST00000460265 TRDNQ13061 729 aa18.12■□□□□ 0.49
LMNB1-203ENST00000460265 NOLC1Q14978 699 aaKnown RBP eCLIP18.12■□□□□ 0.49
LMNB1-203ENST00000460265 AEBP2Q6ZN18 517 aaPredicted RBP18.12■□□□□ 0.49
LMNB1-203ENST00000460265 NCOA5Q9HCD5 579 aaKnown RBP18.12■□□□□ 0.49
LMNB1-203ENST00000460265 KDM6AO15550 1401 aaPredicted RBP18.12■□□□□ 0.49
LMNB1-203ENST00000460265 ERVV-2B6SEH9 535 aa18.12■□□□□ 0.49
LMNB1-203ENST00000460265 IQSEC3Q9UPP2 1182 aaPredicted RBP18.12■□□□□ 0.49
LMNB1-203ENST00000460265 ADORA1P30542 326 aa18.11■□□□□ 0.49
LMNB1-203ENST00000460265 LRRFIP1Q32MZ4 808 aaKnown RBP18.11■□□□□ 0.49
LMNB1-203ENST00000460265 RRP12Q5JTH9 1297 aaKnown RBP18.11■□□□□ 0.49
LMNB1-203ENST00000460265 KBTBD3Q8NAB2 608 aa18.11■□□□□ 0.49
LMNB1-203ENST00000460265 TTC14Q96N46 770 aa18.11■□□□□ 0.49
LMNB1-203ENST00000460265 MPHOSPH8Q99549 860 aa18.11■□□□□ 0.49
LMNB1-203ENST00000460265 LTN1O94822 1766 aa18.11■□□□□ 0.49
LMNB1-203ENST00000460265 HEG1Q9ULI3 1381 aa18.11■□□□□ 0.49
LMNB1-203ENST00000460265 UBE2HP62256 183 aa18.11■□□□□ 0.49
LMNB1-203ENST00000460265 C17orf53Q8N3J3 647 aaPredicted RBP18.11■□□□□ 0.49
LMNB1-203ENST00000460265 BCL2L12Q9HB09 334 aa18.11■□□□□ 0.49
LMNB1-203ENST00000460265 PIGBQ92521 554 aa18.11■□□□□ 0.49
LMNB1-203ENST00000460265 CCDC183Q5T5S1 534 aa18.1■□□□□ 0.49
LMNB1-203ENST00000460265 CYP21A2P08686 494 aa18.1■□□□□ 0.49
LMNB1-203ENST00000460265 HMG20BQ9P0W2 317 aa18.1■□□□□ 0.49
LMNB1-203ENST00000460265 XRN1Q8IZH2 1706 aaKnown RBP18.1■□□□□ 0.49
LMNB1-203ENST00000460265 NALCNQ8IZF0 1738 aa18.1■□□□□ 0.49
LMNB1-203ENST00000460265 TCIRG1Q13488 830 aa18.1■□□□□ 0.49
LMNB1-203ENST00000460265 NFXL1Q6ZNB6 911 aa18.1■□□□□ 0.49
LMNB1-203ENST00000460265 XAGE2Q96GT9 111 aa18.1■□□□□ 0.49
LMNB1-203ENST00000460265 MTMR6Q9Y217 621 aa18.1■□□□□ 0.49
LMNB1-203ENST00000460265 AKAP2Q9Y2D5 859 aa18.1■□□□□ 0.49
LMNB1-203ENST00000460265 RGPD1P0DJD0 1748 aa18.09■□□□□ 0.49
LMNB1-203ENST00000460265 NFAT5O94916 1531 aa18.09■□□□□ 0.49
LMNB1-203ENST00000460265 CARD10Q9BWT7 1032 aa18.09■□□□□ 0.49
LMNB1-203ENST00000460265 PXDNLA1KZ92 1463 aa18.09■□□□□ 0.49
LMNB1-203ENST00000460265 TNS3Q68CZ2 1445 aa18.09■□□□□ 0.49
LMNB1-203ENST00000460265 ANKRD18BA2A2Z9 1011 aa18.08■□□□□ 0.49
LMNB1-203ENST00000460265 IRS4O14654 1257 aaPredicted RBP18.08■□□□□ 0.49
LMNB1-203ENST00000460265 TNMDQ9H2S6 317 aa18.08■□□□□ 0.49
LMNB1-203ENST00000460265 CCDC144CPQ8IYA2 1237 aa18.08■□□□□ 0.49
LMNB1-203ENST00000460265 HAUS7Q99871 368 aa18.08■□□□□ 0.49
LMNB1-203ENST00000460265 H7C1W4 665 aa18.08■□□□□ 0.48
LMNB1-203ENST00000460265 ITGA6P23229 1130 aa18.08■□□□□ 0.48
LMNB1-203ENST00000460265 HLFQ16534 295 aa18.08■□□□□ 0.48
LMNB1-203ENST00000460265 CLEC17AQ6ZS10 378 aa18.08■□□□□ 0.48
LMNB1-203ENST00000460265 TM6SF1Q9BZW5 370 aa18.08■□□□□ 0.48
LMNB1-203ENST00000460265 RGPD2P0DJD1 1756 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms