RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 CAMK4Q16566 473 aa14.79□□□□□ -0.04
LINC00959-201ENST00000456581 CCDC183Q5T5S1 534 aa14.79□□□□□ -0.04
LINC00959-201ENST00000456581 NEUROD6Q96NK8 337 aa14.79□□□□□ -0.04
LINC00959-201ENST00000456581 DNAJC2Q99543 621 aaKnown RBP14.79□□□□□ -0.04
LINC00959-201ENST00000456581 PRDM4Q9UKN5 801 aa14.79□□□□□ -0.04
LINC00959-201ENST00000456581 ME3Q16798 604 aa14.79□□□□□ -0.04
LINC00959-201ENST00000456581 NUP188Q5SRE5 1749 aa14.79□□□□□ -0.04
LINC00959-201ENST00000456581 TCIRG1Q13488 830 aa14.79□□□□□ -0.04
LINC00959-201ENST00000456581 ZNF589Q86UQ0 364 aaPredicted RBP14.79□□□□□ -0.04
LINC00959-201ENST00000456581 CCDC191Q8NCU4 936 aa14.79□□□□□ -0.04
LINC00959-201ENST00000456581 PYCARDQ9ULZ3 195 aa14.79□□□□□ -0.04
LINC00959-201ENST00000456581 PDRG1Q9NUG6 133 aa14.78□□□□□ -0.04
LINC00959-201ENST00000456581 TBC1D2BQ9UPU7 963 aa14.78□□□□□ -0.04
LINC00959-201ENST00000456581 MTMR6Q9Y217 621 aa14.78□□□□□ -0.04
LINC00959-201ENST00000456581 PHLPP1O60346 1717 aa14.78□□□□□ -0.04
LINC00959-201ENST00000456581 ISCA1Q9BUE6 129 aa14.78□□□□□ -0.04
LINC00959-201ENST00000456581 BCL9O00512 1426 aa14.78□□□□□ -0.04
LINC00959-201ENST00000456581 STARD3NLO95772 234 aa14.77□□□□□ -0.04
LINC00959-201ENST00000456581 STK3Q13188 491 aa14.77□□□□□ -0.04
LINC00959-201ENST00000456581 SASS6Q6UVJ0 657 aa14.77□□□□□ -0.04
LINC00959-201ENST00000456581 DDX46Q7L014 1031 aaKnown RBP14.77□□□□□ -0.04
LINC00959-201ENST00000456581 SEC62Q99442 399 aaKnown RBP14.77□□□□□ -0.04
LINC00959-201ENST00000456581 KCNF1Q9H3M0 494 aa14.77□□□□□ -0.04
LINC00959-201ENST00000456581 ZHX1Q9UKY1 873 aaPredicted RBP14.77□□□□□ -0.04
LINC00959-201ENST00000456581 TPCN1Q9ULQ1 816 aa14.77□□□□□ -0.04
LINC00959-201ENST00000456581 TJP1Q07157 1748 aa14.77□□□□□ -0.04
LINC00959-201ENST00000456581 CYP19A1P11511 503 aaPredicted RBP14.77□□□□□ -0.05
LINC00959-201ENST00000456581 NOLC1Q14978 699 aaKnown RBP eCLIP14.77□□□□□ -0.05
LINC00959-201ENST00000456581 COL14A1Q05707 1796 aaKnown RBP14.76□□□□□ -0.05
LINC00959-201ENST00000456581 UBAP1LF5GYI3 381 aa14.76□□□□□ -0.05
LINC00959-201ENST00000456581 CCDC129Q6ZRS4 1044 aa14.76□□□□□ -0.05
LINC00959-201ENST00000456581 CDC37L1Q7L3B6 337 aa14.76□□□□□ -0.05
LINC00959-201ENST00000456581 PHF14O94880 888 aa14.76□□□□□ -0.05
LINC00959-201ENST00000456581 UBE2HP62256 183 aa14.76□□□□□ -0.05
LINC00959-201ENST00000456581 IGSF3O75054 1194 aa14.75□□□□□ -0.05
LINC00959-201ENST00000456581 PPFIA3O75145 1194 aa14.75□□□□□ -0.05
LINC00959-201ENST00000456581 KCNJ4P48050 445 aa14.75□□□□□ -0.05
LINC00959-201ENST00000456581 KIF6Q6ZMV9 814 aa14.75□□□□□ -0.05
LINC00959-201ENST00000456581 IL17RAQ96F46 866 aa14.75□□□□□ -0.05
LINC00959-201ENST00000456581 DDB1Q16531 1140 aa14.75□□□□□ -0.05
LINC00959-201ENST00000456581 CSPP1Q1MSJ5 1256 aa14.75□□□□□ -0.05
LINC00959-201ENST00000456581 CKAP2LQ8IYA6 745 aa14.75□□□□□ -0.05
LINC00959-201ENST00000456581 MARCH10Q8NA82 808 aaPredicted RBP14.75□□□□□ -0.05
LINC00959-201ENST00000456581 RUFY2Q8WXA3 655 aa14.75□□□□□ -0.05
LINC00959-201ENST00000456581 RBM8AQ9Y5S9 174 aaKnown RBP14.75□□□□□ -0.05
LINC00959-201ENST00000456581 CCDC171Q6TFL3 1326 aa14.75□□□□□ -0.05
LINC00959-201ENST00000456581 CBX1P83916 185 aa14.74□□□□□ -0.05
LINC00959-201ENST00000456581 TMEM87AQ8NBN3 555 aa14.74□□□□□ -0.05
LINC00959-201ENST00000456581 TFIP11Q9UBB9 837 aaKnown RBP14.74□□□□□ -0.05
LINC00959-201ENST00000456581 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.74□□□□□ -0.05
LINC00959-201ENST00000456581 SPATA31A1Q5TZJ5 1347 aa14.74□□□□□ -0.05
LINC00959-201ENST00000456581 COL15A1P39059 1388 aa14.74□□□□□ -0.05
LINC00959-201ENST00000456581 EP400Q96L91 3159 aa14.74□□□□□ -0.05
LINC00959-201ENST00000456581 A0A087WWV3 80 aa14.74□□□□□ -0.05
LINC00959-201ENST00000456581 LIG1P18858 919 aa14.74□□□□□ -0.05
LINC00959-201ENST00000456581 ATP5JP18859 108 aa14.74□□□□□ -0.05
LINC00959-201ENST00000456581 MCM5P33992 734 aa14.74□□□□□ -0.05
LINC00959-201ENST00000456581 KCNQ4P56696 695 aa14.74□□□□□ -0.05
LINC00959-201ENST00000456581 KCNQ2O43526 872 aa14.74□□□□□ -0.05
LINC00959-201ENST00000456581 ATP2B3Q16720 1220 aa14.74□□□□□ -0.05
LINC00959-201ENST00000456581 TTC6Q86TZ1 520 aa14.74□□□□□ -0.05
LINC00959-201ENST00000456581 FUCA2Q9BTY2 467 aa14.74□□□□□ -0.05
LINC00959-201ENST00000456581 MAP3K15Q6ZN16 1313 aa14.74□□□□□ -0.05
LINC00959-201ENST00000456581 SPDYE4A6NLX3 237 aa14.73□□□□□ -0.05
LINC00959-201ENST00000456581 EYA2O00167 538 aa14.73□□□□□ -0.05
LINC00959-201ENST00000456581 KDM4AO75164 1064 aa14.73□□□□□ -0.05
LINC00959-201ENST00000456581 NAA30Q147X3 362 aaPredicted RBP14.73□□□□□ -0.05
LINC00959-201ENST00000456581 GIGYF2Q6Y7W6 1299 aaKnown RBP14.73□□□□□ -0.05
LINC00959-201ENST00000456581 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.73□□□□□ -0.05
LINC00959-201ENST00000456581 DYNC1I1O14576 645 aa14.73□□□□□ -0.05
LINC00959-201ENST00000456581 FOSBP53539 338 aa14.73□□□□□ -0.05
LINC00959-201ENST00000456581 TERF1P54274 439 aa14.73□□□□□ -0.05
LINC00959-201ENST00000456581 NECTIN1Q15223 517 aa14.73□□□□□ -0.05
LINC00959-201ENST00000456581 CREB3L3Q68CJ9 461 aa14.73□□□□□ -0.05
LINC00959-201ENST00000456581 TEX13AQ9BXU3 409 aaPredicted RBP14.73□□□□□ -0.05
LINC00959-201ENST00000456581 CYP46A1Q9Y6A2 500 aa14.73□□□□□ -0.05
LINC00959-201ENST00000456581 GOLIM4O00461 696 aa14.72□□□□□ -0.05
LINC00959-201ENST00000456581 ADORA1P30542 326 aa14.72□□□□□ -0.05
LINC00959-201ENST00000456581 LUZP1Q86V48 1076 aa14.72□□□□□ -0.05
LINC00959-201ENST00000456581 PIBF1Q8WXW3 757 aa14.72□□□□□ -0.05
LINC00959-201ENST00000456581 DDX11Q96FC9 970 aa14.72□□□□□ -0.05
LINC00959-201ENST00000456581 SNRKQ9NRH2 765 aa14.72□□□□□ -0.05
LINC00959-201ENST00000456581 NRBP1Q9UHY1 535 aa14.72□□□□□ -0.05
LINC00959-201ENST00000456581 A0A1B0GUL7 405 aa14.72□□□□□ -0.05
LINC00959-201ENST00000456581 LRMPQ12912 555 aa14.72□□□□□ -0.05
LINC00959-201ENST00000456581 CCDC57Q2TAC2 916 aa14.72□□□□□ -0.05
LINC00959-201ENST00000456581 SMIM5Q71RC9 77 aa14.72□□□□□ -0.05
LINC00959-201ENST00000456581 NLRP10Q86W26 655 aa14.72□□□□□ -0.05
LINC00959-201ENST00000456581 LARP1BQ659C4 914 aaKnown RBP14.71□□□□□ -0.05
LINC00959-201ENST00000456581 MYRIPQ8NFW9 859 aa14.71□□□□□ -0.05
LINC00959-201ENST00000456581 MAP4K1Q92918 833 aa14.71□□□□□ -0.05
LINC00959-201ENST00000456581 ZSWIM6Q9HCJ5 1215 aa14.71□□□□□ -0.05
LINC00959-201ENST00000456581 GREM2Q9H772 168 aa14.71□□□□□ -0.05
LINC00959-201ENST00000456581 PCCAP05165 728 aaPredicted RBP14.7□□□□□ -0.06
LINC00959-201ENST00000456581 IL15P40933 162 aaPredicted RBP14.7□□□□□ -0.06
LINC00959-201ENST00000456581 VPS53Q5VIR6 699 aa14.7□□□□□ -0.06
LINC00959-201ENST00000456581 PTF1AQ7RTS3 328 aa14.7□□□□□ -0.06
LINC00959-201ENST00000456581 DZIP3Q86Y13 1208 aaKnown RBP14.7□□□□□ -0.06
LINC00959-201ENST00000456581 ZBTB38Q8NAP3 1195 aaPredicted RBP14.7□□□□□ -0.06
LINC00959-201ENST00000456581 HAUS7Q99871 368 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms