RNA–Protein interactions for RNA: ENST00000442218.2

SLC48A1-201, Transcript of solute carrier family 48 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC48A1, Length 3,010 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-201ENST00000442218 BCL2L12Q9HB09 334 aa15.53■□□□□ 0.08
SLC48A1-201ENST00000442218 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.53■□□□□ 0.08
SLC48A1-201ENST00000442218 V9GYY5 206 aaPredicted RBP15.53■□□□□ 0.08
SLC48A1-201ENST00000442218 PHKG2P15735 406 aa15.53■□□□□ 0.08
SLC48A1-201ENST00000442218 APOBRQ0VD83 1088 aa15.53■□□□□ 0.08
SLC48A1-201ENST00000442218 SNRKQ9NRH2 765 aa15.53■□□□□ 0.08
SLC48A1-201ENST00000442218 A1BGP04217 495 aa15.52■□□□□ 0.08
SLC48A1-201ENST00000442218 TTLL7Q6ZT98 887 aa15.52■□□□□ 0.08
SLC48A1-201ENST00000442218 GOLIM4O00461 696 aa15.52■□□□□ 0.07
SLC48A1-201ENST00000442218 NPHP1O15259 732 aa15.52■□□□□ 0.07
SLC48A1-201ENST00000442218 TAF5LO75529 589 aa15.52■□□□□ 0.07
SLC48A1-201ENST00000442218 GCKRQ14397 625 aa15.52■□□□□ 0.07
SLC48A1-201ENST00000442218 ANKRD13DQ6ZTN6 518 aa15.52■□□□□ 0.07
SLC48A1-201ENST00000442218 ERC1Q8IUD2 1116 aa15.52■□□□□ 0.07
SLC48A1-201ENST00000442218 GJB4Q9NTQ9 266 aa15.52■□□□□ 0.07
SLC48A1-201ENST00000442218 CYP21A2P08686 494 aa15.52■□□□□ 0.07
SLC48A1-201ENST00000442218 HAND2P61296 217 aa15.52■□□□□ 0.07
SLC48A1-201ENST00000442218 NEXNQ0ZGT2 675 aa15.52■□□□□ 0.07
SLC48A1-201ENST00000442218 ATP2B3Q16720 1220 aa15.52■□□□□ 0.07
SLC48A1-201ENST00000442218 KIAA1524Q8TCG1 905 aa15.52■□□□□ 0.07
SLC48A1-201ENST00000442218 KIF3AQ9Y496 699 aa15.52■□□□□ 0.07
SLC48A1-201ENST00000442218 KDM6AO15550 1401 aaPredicted RBP15.51■□□□□ 0.07
SLC48A1-201ENST00000442218 A0A087WZG4 1122 aa15.51■□□□□ 0.07
SLC48A1-201ENST00000442218 PSMA5P28066 241 aa15.51■□□□□ 0.07
SLC48A1-201ENST00000442218 FILIP1Q7Z7B0 1213 aa15.51■□□□□ 0.07
SLC48A1-201ENST00000442218 FAM200AQ8TCP9 573 aa15.51■□□□□ 0.07
SLC48A1-201ENST00000442218 STRN4Q9NRL3 753 aa15.51■□□□□ 0.07
SLC48A1-201ENST00000442218 ALDH1L1O75891 902 aa15.51■□□□□ 0.07
SLC48A1-201ENST00000442218 LETM1O95202 739 aaPredicted RBP15.51■□□□□ 0.07
SLC48A1-201ENST00000442218 DDX58O95786 925 aaKnown RBP15.51■□□□□ 0.07
SLC48A1-201ENST00000442218 U2AF2P26368 475 aaKnown RBP eCLIP15.51■□□□□ 0.07
SLC48A1-201ENST00000442218 ZNF165P49910 485 aa15.51■□□□□ 0.07
SLC48A1-201ENST00000442218 RNF20Q5VTR2 975 aa15.51■□□□□ 0.07
SLC48A1-201ENST00000442218 TTLL5Q6EMB2 1281 aa15.51■□□□□ 0.07
SLC48A1-201ENST00000442218 ISM2Q6H9L7 571 aa15.51■□□□□ 0.07
SLC48A1-201ENST00000442218 TTC5Q8N0Z6 440 aa15.51■□□□□ 0.07
SLC48A1-201ENST00000442218 CCDC144BQ3MJ40 725 aa15.5■□□□□ 0.07
SLC48A1-201ENST00000442218 STOX1Q6ZVD7 989 aa15.5■□□□□ 0.07
SLC48A1-201ENST00000442218 CCDC144CPQ8IYA2 1237 aa15.5■□□□□ 0.07
SLC48A1-201ENST00000442218 NEK1Q96PY6 1258 aa15.5■□□□□ 0.07
SLC48A1-201ENST00000442218 TRMT1Q9NXH9 659 aaKnown RBP15.5■□□□□ 0.07
SLC48A1-201ENST00000442218 MTX1Q13505 466 aa15.5■□□□□ 0.07
SLC48A1-201ENST00000442218 PTPN21Q16825 1174 aa15.5■□□□□ 0.07
SLC48A1-201ENST00000442218 TOM1L2Q6ZVM7 507 aa15.5■□□□□ 0.07
SLC48A1-201ENST00000442218 IL17RAQ96F46 866 aa15.5■□□□□ 0.07
SLC48A1-201ENST00000442218 FMNL2Q96PY5 1086 aa15.5■□□□□ 0.07
SLC48A1-201ENST00000442218 KDM3BQ7LBC6 1761 aa15.5■□□□□ 0.07
SLC48A1-201ENST00000442218 TERF1P54274 439 aa15.49■□□□□ 0.07
SLC48A1-201ENST00000442218 SCRN1Q12765 414 aa15.49■□□□□ 0.07
SLC48A1-201ENST00000442218 C11orf57Q6ZUT1 292 aaPredicted RBP15.49■□□□□ 0.07
SLC48A1-201ENST00000442218 KAT6BQ8WYB5 2073 aa15.49■□□□□ 0.07
SLC48A1-201ENST00000442218 NHSL1Q5SYE7 1610 aa15.49■□□□□ 0.07
SLC48A1-201ENST00000442218 LMBR1LQ6UX01 489 aa15.49■□□□□ 0.07
SLC48A1-201ENST00000442218 SYNE4Q8N205 404 aa15.49■□□□□ 0.07
SLC48A1-201ENST00000442218 HOXB7P09629 217 aa15.49■□□□□ 0.07
SLC48A1-201ENST00000442218 CABP4P57796 275 aa15.49■□□□□ 0.07
SLC48A1-201ENST00000442218 TNNI3KQ59H18 835 aa15.49■□□□□ 0.07
SLC48A1-201ENST00000442218 STK11IPQ8N1F8 1099 aa15.49■□□□□ 0.07
SLC48A1-201ENST00000442218 TM6SF1Q9BZW5 370 aa15.49■□□□□ 0.07
SLC48A1-201ENST00000442218 FPGT-TNNI3KV9GXZ4 949 aa15.49■□□□□ 0.07
SLC48A1-201ENST00000442218 USP42Q9H9J4 1324 aaKnown RBP15.49■□□□□ 0.07
SLC48A1-201ENST00000442218 PXDNLA1KZ92 1463 aa15.48■□□□□ 0.07
SLC48A1-201ENST00000442218 NBPF26B4DH59 902 aa15.48■□□□□ 0.07
SLC48A1-201ENST00000442218 PTPN12Q05209 780 aaKnown RBP15.48■□□□□ 0.07
SLC48A1-201ENST00000442218 NBPF14Q5TI25 921 aa15.48■□□□□ 0.07
SLC48A1-201ENST00000442218 NBPF10Q6P3W6 841 aaKnown RBP15.48■□□□□ 0.07
SLC48A1-201ENST00000442218 WDR17Q8IZU2 1322 aa15.48■□□□□ 0.07
SLC48A1-201ENST00000442218 NBPF15Q8N660 670 aa15.48■□□□□ 0.07
SLC48A1-201ENST00000442218 ABCA3Q99758 1704 aa15.47■□□□□ 0.07
SLC48A1-201ENST00000442218 USP27XA6NNY8 438 aa15.47■□□□□ 0.07
SLC48A1-201ENST00000442218 CLIP2Q9UDT6 1046 aa15.47■□□□□ 0.07
SLC48A1-201ENST00000442218 A0A0G2JS52 829 aa15.47■□□□□ 0.07
SLC48A1-201ENST00000442218 BIN1O00499 593 aa15.47■□□□□ 0.07
SLC48A1-201ENST00000442218 POLR3DP05423 398 aaPredicted RBP15.47■□□□□ 0.07
SLC48A1-201ENST00000442218 CACTINQ8WUQ7 758 aaKnown RBP15.47■□□□□ 0.07
SLC48A1-201ENST00000442218 COL5A2P05997 1499 aaPredicted RBP15.47■□□□□ 0.07
SLC48A1-201ENST00000442218 FKBP4Q02790 459 aaKnown RBP eCLIP15.46■□□□□ 0.07
SLC48A1-201ENST00000442218 IFNL2Q8IZJ0 200 aa15.46■□□□□ 0.07
SLC48A1-201ENST00000442218 PUS3Q9BZE2 481 aaKnown RBP15.46■□□□□ 0.07
SLC48A1-201ENST00000442218 GOLPH3LQ9H4A5 285 aa15.46■□□□□ 0.07
SLC48A1-201ENST00000442218 ABCC6O95255 1503 aa15.46■□□□□ 0.07
SLC48A1-201ENST00000442218 CHAF1AQ13111 956 aaPredicted RBP15.46■□□□□ 0.07
SLC48A1-201ENST00000442218 LRRC24Q50LG9 513 aa15.46■□□□□ 0.07
SLC48A1-201ENST00000442218 PDCP20941 246 aa15.46■□□□□ 0.06
SLC48A1-201ENST00000442218 GTF3C6Q969F1 213 aa15.46■□□□□ 0.06
SLC48A1-201ENST00000442218 METTL22Q9BUU2 404 aaPredicted RBP15.46■□□□□ 0.06
SLC48A1-201ENST00000442218 ZNF609O15014 1411 aa15.45■□□□□ 0.06
SLC48A1-201ENST00000442218 ME1P48163 572 aa15.45■□□□□ 0.06
SLC48A1-201ENST00000442218 TPD52L1Q16890 204 aaPredicted RBP15.45■□□□□ 0.06
SLC48A1-201ENST00000442218 LRP10Q7Z4F1 713 aa15.45■□□□□ 0.06
SLC48A1-201ENST00000442218 CCAR1Q8IX12 1150 aaKnown RBP15.45■□□□□ 0.06
SLC48A1-201ENST00000442218 USP28Q96RU2 1077 aa15.45■□□□□ 0.06
SLC48A1-201ENST00000442218 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.45■□□□□ 0.06
SLC48A1-201ENST00000442218 HEG1Q9ULI3 1381 aa15.45■□□□□ 0.06
SLC48A1-201ENST00000442218 SCAND2PQ9GZW5 306 aaPredicted RBP15.45■□□□□ 0.06
SLC48A1-201ENST00000442218 OVOS2A0A0G2JMS6 1433 aa15.45■□□□□ 0.06
SLC48A1-201ENST00000442218 SIPA1L3O60292 1781 aaPredicted RBP15.44■□□□□ 0.06
SLC48A1-201ENST00000442218 GOLGA6L6A8MZA4 724 aa15.44■□□□□ 0.06
SLC48A1-201ENST00000442218 ZNF75DP51815 510 aa15.44■□□□□ 0.06
SLC48A1-201ENST00000442218 EVA1CP58658 441 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms