RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 PRDM11Q9NQV5 511 aa15.96■□□□□ 0.14
PCNX3-202ENST00000439247 TTC41PQ6P2S7 1318 aa15.96■□□□□ 0.14
PCNX3-202ENST00000439247 CCDC69A6NI79 296 aa15.95■□□□□ 0.14
PCNX3-202ENST00000439247 GABPB1Q06547 395 aaPredicted RBP15.95■□□□□ 0.14
PCNX3-202ENST00000439247 SIL1Q9H173 461 aa15.95■□□□□ 0.14
PCNX3-202ENST00000439247 GOLGA6L19H0YKK7 550 aa15.95■□□□□ 0.14
PCNX3-202ENST00000439247 CWF19L2Q2TBE0 894 aaKnown RBP15.95■□□□□ 0.14
PCNX3-202ENST00000439247 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.95■□□□□ 0.14
PCNX3-202ENST00000439247 LGR6Q9HBX8 967 aa15.95■□□□□ 0.14
PCNX3-202ENST00000439247 KLHDC4Q8TBB5 520 aa15.94■□□□□ 0.14
PCNX3-202ENST00000439247 ZNF446Q9NWS9 450 aa15.94■□□□□ 0.14
PCNX3-202ENST00000439247 ABCA3Q99758 1704 aa15.94■□□□□ 0.14
PCNX3-202ENST00000439247 TOM1O60784 492 aa15.94■□□□□ 0.14
PCNX3-202ENST00000439247 RPS6KB1P23443 525 aa15.94■□□□□ 0.14
PCNX3-202ENST00000439247 KRT222Q8N1A0 295 aa15.94■□□□□ 0.14
PCNX3-202ENST00000439247 EAF2Q96CJ1 260 aaPredicted RBP15.94■□□□□ 0.14
PCNX3-202ENST00000439247 GOLPH3LQ9H4A5 285 aa15.94■□□□□ 0.14
PCNX3-202ENST00000439247 ADCY9O60503 1353 aa15.94■□□□□ 0.14
PCNX3-202ENST00000439247 PDCP20941 246 aa15.94■□□□□ 0.14
PCNX3-202ENST00000439247 CCZ1BP86790 482 aa15.94■□□□□ 0.14
PCNX3-202ENST00000439247 CCZ1P86791 482 aaPredicted RBP15.94■□□□□ 0.14
PCNX3-202ENST00000439247 NYAP1Q6ZVC0 841 aa15.94■□□□□ 0.14
PCNX3-202ENST00000439247 ZNF397Q8NF99 534 aaPredicted RBP15.94■□□□□ 0.14
PCNX3-202ENST00000439247 EVI5LQ96CN4 794 aa15.94■□□□□ 0.14
PCNX3-202ENST00000439247 TRERF1Q96PN7 1200 aa15.94■□□□□ 0.14
PCNX3-202ENST00000439247 NLRP2Q9NX02 1062 aa15.94■□□□□ 0.14
PCNX3-202ENST00000439247 USP42Q9H9J4 1324 aaKnown RBP15.94■□□□□ 0.14
PCNX3-202ENST00000439247 CPDO75976 1380 aa15.93■□□□□ 0.14
PCNX3-202ENST00000439247 AHDC1Q5TGY3 1603 aaPredicted RBP15.93■□□□□ 0.14
PCNX3-202ENST00000439247 CSB-PGBD3P0DP91 1061 aa15.92■□□□□ 0.14
PCNX3-202ENST00000439247 RESTQ13127 1097 aa15.92■□□□□ 0.14
PCNX3-202ENST00000439247 FSD1Q9BTV5 496 aa15.92■□□□□ 0.14
PCNX3-202ENST00000439247 CAMTA1Q9Y6Y1 1673 aa15.92■□□□□ 0.14
PCNX3-202ENST00000439247 SASH1O94885 1247 aa15.92■□□□□ 0.14
PCNX3-202ENST00000439247 ERCC6LQ2NKX8 1250 aa15.92■□□□□ 0.14
PCNX3-202ENST00000439247 C9orf78Q9NZ63 289 aaPredicted RBP15.92■□□□□ 0.14
PCNX3-202ENST00000439247 PDE4CQ08493 712 aa15.92■□□□□ 0.14
PCNX3-202ENST00000439247 PROSER3Q2NL68 480 aa15.92■□□□□ 0.14
PCNX3-202ENST00000439247 GTF3C6Q969F1 213 aa15.92■□□□□ 0.14
PCNX3-202ENST00000439247 BECN2A8MW95 431 aa15.91■□□□□ 0.14
PCNX3-202ENST00000439247 H3BQV1 296 aa15.91■□□□□ 0.14
PCNX3-202ENST00000439247 PSMA5P28066 241 aa15.91■□□□□ 0.14
PCNX3-202ENST00000439247 IFFO2Q5TF58 517 aa15.91■□□□□ 0.14
PCNX3-202ENST00000439247 DHX40Q8IX18 779 aaKnown RBP15.91■□□□□ 0.14
PCNX3-202ENST00000439247 PXDNLA1KZ92 1463 aa15.91■□□□□ 0.14
PCNX3-202ENST00000439247 HSP90B1P14625 803 aaKnown RBP15.91■□□□□ 0.14
PCNX3-202ENST00000439247 HSP90AB4PQ58FF6 505 aa15.91■□□□□ 0.14
PCNX3-202ENST00000439247 CCDC129Q6ZRS4 1044 aa15.91■□□□□ 0.14
PCNX3-202ENST00000439247 CCAR1Q8IX12 1150 aaKnown RBP15.91■□□□□ 0.14
PCNX3-202ENST00000439247 CCAR2Q8N163 923 aaKnown RBP15.91■□□□□ 0.14
PCNX3-202ENST00000439247 PRAMEF22A3QJZ6 481 aa15.9■□□□□ 0.14
PCNX3-202ENST00000439247 GUCY1B3Q02153 619 aa15.9■□□□□ 0.14
PCNX3-202ENST00000439247 AOPEPQ8N6M6 819 aa15.9■□□□□ 0.14
PCNX3-202ENST00000439247 MAP3K2Q9Y2U5 619 aa15.9■□□□□ 0.14
PCNX3-202ENST00000439247 PHLPP1O60346 1717 aa15.9■□□□□ 0.14
PCNX3-202ENST00000439247 EIF4A1P60842 406 aaKnown RBP15.9■□□□□ 0.14
PCNX3-202ENST00000439247 SEC62Q99442 399 aaKnown RBP15.9■□□□□ 0.14
PCNX3-202ENST00000439247 STRN4Q9NRL3 753 aa15.9■□□□□ 0.14
PCNX3-202ENST00000439247 COL16A1Q07092 1604 aaPredicted RBP15.89■□□□□ 0.13
PCNX3-202ENST00000439247 IRX5P78411 483 aaPredicted RBP15.89■□□□□ 0.13
PCNX3-202ENST00000439247 GORABQ5T7V8 394 aa15.89■□□□□ 0.13
PCNX3-202ENST00000439247 Q6ZUG5 572 aa15.89■□□□□ 0.13
PCNX3-202ENST00000439247 GPATCH3Q96I76 525 aa15.89■□□□□ 0.13
PCNX3-202ENST00000439247 CDC25BP30305 580 aa15.89■□□□□ 0.13
PCNX3-202ENST00000439247 COL15A1P39059 1388 aa15.89■□□□□ 0.13
PCNX3-202ENST00000439247 HTATSF1O43719 755 aaKnown RBP15.88■□□□□ 0.13
PCNX3-202ENST00000439247 CERKQ8TCT0 537 aa15.88■□□□□ 0.13
PCNX3-202ENST00000439247 MRFAP1L1Q96HT8 127 aa15.88■□□□□ 0.13
PCNX3-202ENST00000439247 CCDC9Q9Y3X0 531 aaKnown RBP15.88■□□□□ 0.13
PCNX3-202ENST00000439247 NCAPD2Q15021 1401 aa15.88■□□□□ 0.13
PCNX3-202ENST00000439247 ADD1P35611 737 aaKnown RBP15.88■□□□□ 0.13
PCNX3-202ENST00000439247 SNW1Q13573 536 aaKnown RBP15.88■□□□□ 0.13
PCNX3-202ENST00000439247 SLFNL1Q499Z3 407 aa15.88■□□□□ 0.13
PCNX3-202ENST00000439247 SYT10Q6XYQ8 523 aa15.88■□□□□ 0.13
PCNX3-202ENST00000439247 NBPF11Q86T75 865 aa15.88■□□□□ 0.13
PCNX3-202ENST00000439247 CACNA1FO60840 1977 aa15.88■□□□□ 0.13
PCNX3-202ENST00000439247 SLU7O95391 586 aaKnown RBP15.88■□□□□ 0.13
PCNX3-202ENST00000439247 ADAMTS2O95450 1211 aa15.88■□□□□ 0.13
PCNX3-202ENST00000439247 SARM1Q6SZW1 724 aa15.88■□□□□ 0.13
PCNX3-202ENST00000439247 ERO1AQ96HE7 468 aa15.88■□□□□ 0.13
PCNX3-202ENST00000439247 SUCLG2Q96I99 432 aa15.88■□□□□ 0.13
PCNX3-202ENST00000439247 USP28Q96RU2 1077 aa15.88■□□□□ 0.13
PCNX3-202ENST00000439247 NUTM2BA6NNL0 878 aaPredicted RBP15.87■□□□□ 0.13
PCNX3-202ENST00000439247 NUTM2EB1AL46 878 aaPredicted RBP15.87■□□□□ 0.13
PCNX3-202ENST00000439247 SCRN1Q12765 414 aa15.87■□□□□ 0.13
PCNX3-202ENST00000439247 STX1AQ16623 288 aa15.87■□□□□ 0.13
PCNX3-202ENST00000439247 PTPN21Q16825 1174 aa15.87■□□□□ 0.13
PCNX3-202ENST00000439247 E4F1Q66K89 784 aaPredicted RBP15.87■□□□□ 0.13
PCNX3-202ENST00000439247 NUTM2AQ8IVF1 878 aaPredicted RBP15.87■□□□□ 0.13
PCNX3-202ENST00000439247 KAZALD1Q96I82 304 aa15.87■□□□□ 0.13
PCNX3-202ENST00000439247 FMNL2Q96PY5 1086 aa15.87■□□□□ 0.13
PCNX3-202ENST00000439247 FAM53CQ9NYF3 392 aa15.87■□□□□ 0.13
PCNX3-202ENST00000439247 LMO7Q8WWI1 1683 aa15.87■□□□□ 0.13
PCNX3-202ENST00000439247 LRRC37A3O60309 1634 aa15.87■□□□□ 0.13
PCNX3-202ENST00000439247 ANKRD1Q15327 319 aa15.87■□□□□ 0.13
PCNX3-202ENST00000439247 RNF20Q5VTR2 975 aa15.87■□□□□ 0.13
PCNX3-202ENST00000439247 BICC1Q9H694 974 aaKnown RBP15.87■□□□□ 0.13
PCNX3-202ENST00000439247 N4BP2Q86UW6 1770 aaPredicted RBP15.86■□□□□ 0.13
PCNX3-202ENST00000439247 COL5A2P05997 1499 aaPredicted RBP15.86■□□□□ 0.13
PCNX3-202ENST00000439247 AIMP1Q12904 312 aaKnown RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms