RNA–Protein interactions for RNA: ENST00000437025.6

GABRA1-204, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-204ENST00000437025 TTC39AQ5SRH9 613 aa12.6□□□□□ -0.39
GABRA1-204ENST00000437025 TTLL5Q6EMB2 1281 aa12.6□□□□□ -0.39
GABRA1-204ENST00000437025 ERCC4Q92889 916 aaPredicted RBP12.6□□□□□ -0.39
GABRA1-204ENST00000437025 PUS3Q9BZE2 481 aaKnown RBP12.6□□□□□ -0.39
GABRA1-204ENST00000437025 U3KPZ7 1027 aaPredicted RBP12.6□□□□□ -0.39
GABRA1-204ENST00000437025 NALCNQ8IZF0 1738 aa12.6□□□□□ -0.39
GABRA1-204ENST00000437025 CYP21A2P08686 494 aa12.6□□□□□ -0.39
GABRA1-204ENST00000437025 TMEM132AQ24JP5 1023 aa12.6□□□□□ -0.39
GABRA1-204ENST00000437025 PAG1Q9NWQ8 432 aa12.6□□□□□ -0.39
GABRA1-204ENST00000437025 EPB41L2O43491 1005 aaKnown RBP12.6□□□□□ -0.39
GABRA1-204ENST00000437025 ME1P48163 572 aa12.6□□□□□ -0.39
GABRA1-204ENST00000437025 ANO6Q4KMQ2 910 aa12.6□□□□□ -0.39
GABRA1-204ENST00000437025 TEX2Q8IWB9 1127 aa12.6□□□□□ -0.39
GABRA1-204ENST00000437025 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.6□□□□□ -0.39
GABRA1-204ENST00000437025 TOB2Q14106 344 aaPredicted RBP12.59□□□□□ -0.39
GABRA1-204ENST00000437025 HS1BP3Q53T59 392 aa12.59□□□□□ -0.39
GABRA1-204ENST00000437025 TOMM22Q9NS69 142 aa12.59□□□□□ -0.39
GABRA1-204ENST00000437025 A0A0G2JLW4 131 aa12.59□□□□□ -0.39
GABRA1-204ENST00000437025 GOLGA6L19H0YKK7 550 aa12.59□□□□□ -0.39
GABRA1-204ENST00000437025 TYRO3Q06418 890 aa12.59□□□□□ -0.39
GABRA1-204ENST00000437025 OTUD7BQ6GQQ9 843 aa12.59□□□□□ -0.39
GABRA1-204ENST00000437025 FAM89AQ96GI7 184 aa12.59□□□□□ -0.39
GABRA1-204ENST00000437025 DNAJC25Q9H1X3 360 aa12.59□□□□□ -0.39
GABRA1-204ENST00000437025 HMG20BQ9P0W2 317 aa12.59□□□□□ -0.39
GABRA1-204ENST00000437025 GOLGA6L6A8MZA4 724 aa12.59□□□□□ -0.39
GABRA1-204ENST00000437025 CPLX1O14810 134 aa12.59□□□□□ -0.39
GABRA1-204ENST00000437025 ATP5JP18859 108 aa12.59□□□□□ -0.39
GABRA1-204ENST00000437025 FAM193AP78312 1265 aa12.59□□□□□ -0.39
GABRA1-204ENST00000437025 ZCRB1Q8TBF4 217 aaKnown RBP12.59□□□□□ -0.39
GABRA1-204ENST00000437025 SCAND2PQ9GZW5 306 aaPredicted RBP12.59□□□□□ -0.39
GABRA1-204ENST00000437025 TCHHQ07283 1943 aa12.59□□□□□ -0.39
GABRA1-204ENST00000437025 USP42Q9H9J4 1324 aaKnown RBP12.59□□□□□ -0.39
GABRA1-204ENST00000437025 BECN2A8MW95 431 aa12.58□□□□□ -0.39
GABRA1-204ENST00000437025 COPRSQ9NQ92 184 aa12.58□□□□□ -0.39
GABRA1-204ENST00000437025 FAM208AQ9UK61 1670 aaKnown RBP12.58□□□□□ -0.4
GABRA1-204ENST00000437025 CHAF1AQ13111 956 aaPredicted RBP12.58□□□□□ -0.4
GABRA1-204ENST00000437025 GNL2Q13823 731 aaKnown RBP12.58□□□□□ -0.4
GABRA1-204ENST00000437025 PLBD2Q8NHP8 589 aa12.58□□□□□ -0.4
GABRA1-204ENST00000437025 FER1L4A9Z1Z3 1794 aa12.58□□□□□ -0.4
GABRA1-204ENST00000437025 A0A1B0GUL7 405 aa12.58□□□□□ -0.4
GABRA1-204ENST00000437025 GTF2E1P29083 439 aaPredicted RBP12.58□□□□□ -0.4
GABRA1-204ENST00000437025 CCDC73Q6ZRK6 1079 aa12.58□□□□□ -0.4
GABRA1-204ENST00000437025 LEO1Q8WVC0 666 aaPredicted RBP12.58□□□□□ -0.4
GABRA1-204ENST00000437025 TMEM94Q12767 1356 aa12.58□□□□□ -0.4
GABRA1-204ENST00000437025 GPHNQ9NQX3 736 aaPredicted RBP12.57□□□□□ -0.4
GABRA1-204ENST00000437025 NR1I2O75469 434 aa12.57□□□□□ -0.4
GABRA1-204ENST00000437025 POLR3DP05423 398 aaPredicted RBP12.57□□□□□ -0.4
GABRA1-204ENST00000437025 HMGB1P09429 215 aaKnown RBP12.57□□□□□ -0.4
GABRA1-204ENST00000437025 NOLC1Q14978 699 aaKnown RBP eCLIP12.57□□□□□ -0.4
GABRA1-204ENST00000437025 CCDC158Q5M9N0 1113 aa12.57□□□□□ -0.4
GABRA1-204ENST00000437025 RALYLQ86SE5 291 aaKnown RBP12.57□□□□□ -0.4
GABRA1-204ENST00000437025 KBTBD3Q8NAB2 608 aa12.57□□□□□ -0.4
GABRA1-204ENST00000437025 PTPDC1A2A3K4 754 aa12.57□□□□□ -0.4
GABRA1-204ENST00000437025 ZNF500O60304 480 aaPredicted RBP12.57□□□□□ -0.4
GABRA1-204ENST00000437025 PTGS1P23219 599 aa12.57□□□□□ -0.4
GABRA1-204ENST00000437025 PI16Q6UXB8 463 aa12.57□□□□□ -0.4
GABRA1-204ENST00000437025 SDF4Q9BRK5 362 aa12.57□□□□□ -0.4
GABRA1-204ENST00000437025 XRN1Q8IZH2 1706 aaKnown RBP12.56□□□□□ -0.4
GABRA1-204ENST00000437025 NBPF26B4DH59 902 aa12.56□□□□□ -0.4
GABRA1-204ENST00000437025 IDH1O75874 414 aaKnown RBP12.56□□□□□ -0.4
GABRA1-204ENST00000437025 ZNF165P49910 485 aa12.56□□□□□ -0.4
GABRA1-204ENST00000437025 UVSSAQ2YD98 709 aa12.56□□□□□ -0.4
GABRA1-204ENST00000437025 NBPF14Q5TI25 921 aa12.56□□□□□ -0.4
GABRA1-204ENST00000437025 NBPF10Q6P3W6 841 aaKnown RBP12.56□□□□□ -0.4
GABRA1-204ENST00000437025 NBPF15Q8N660 670 aa12.56□□□□□ -0.4
GABRA1-204ENST00000437025 CNNM1Q9NRU3 951 aa12.56□□□□□ -0.4
GABRA1-204ENST00000437025 CCDC144CPQ8IYA2 1237 aa12.56□□□□□ -0.4
GABRA1-204ENST00000437025 PLCD4Q9BRC7 762 aa12.56□□□□□ -0.4
GABRA1-204ENST00000437025 KIF3AQ9Y496 699 aa12.56□□□□□ -0.4
GABRA1-204ENST00000437025 SCRN1Q12765 414 aa12.56□□□□□ -0.4
GABRA1-204ENST00000437025 GTF3C6Q969F1 213 aa12.56□□□□□ -0.4
GABRA1-204ENST00000437025 KINO60870 393 aaKnown RBP12.55□□□□□ -0.4
GABRA1-204ENST00000437025 RXRAP19793 462 aa12.55□□□□□ -0.4
GABRA1-204ENST00000437025 ADORA1P30542 326 aa12.55□□□□□ -0.4
GABRA1-204ENST00000437025 METTL24Q5JXM2 366 aa12.55□□□□□ -0.4
GABRA1-204ENST00000437025 FILIP1Q7Z7B0 1213 aa12.55□□□□□ -0.4
GABRA1-204ENST00000437025 TMEM87AQ8NBN3 555 aa12.55□□□□□ -0.4
GABRA1-204ENST00000437025 FAM200AQ8TCP9 573 aa12.55□□□□□ -0.4
GABRA1-204ENST00000437025 CCDC186Q7Z3E2 898 aa12.55□□□□□ -0.4
GABRA1-204ENST00000437025 CADPS2Q86UW7 1296 aa12.55□□□□□ -0.4
GABRA1-204ENST00000437025 SYNE4Q8N205 404 aa12.55□□□□□ -0.4
GABRA1-204ENST00000437025 HAUS7Q99871 368 aa12.55□□□□□ -0.4
GABRA1-204ENST00000437025 LTN1O94822 1766 aa12.55□□□□□ -0.4
GABRA1-204ENST00000437025 MCM5P33992 734 aa12.55□□□□□ -0.4
GABRA1-204ENST00000437025 STOX1Q6ZVD7 989 aa12.55□□□□□ -0.4
GABRA1-204ENST00000437025 HELBQ8NG08 1087 aaPredicted RBP12.55□□□□□ -0.4
GABRA1-204ENST00000437025 TMOD3Q9NYL9 352 aa12.55□□□□□ -0.4
GABRA1-204ENST00000437025 NCAPD2Q15021 1401 aa12.54□□□□□ -0.4
GABRA1-204ENST00000437025 IL15P40933 162 aaPredicted RBP12.54□□□□□ -0.4
GABRA1-204ENST00000437025 KIF6Q6ZMV9 814 aa12.54□□□□□ -0.4
GABRA1-204ENST00000437025 DHX32Q7L7V1 743 aaKnown RBP12.54□□□□□ -0.4
GABRA1-204ENST00000437025 CCAR1Q8IX12 1150 aaKnown RBP12.54□□□□□ -0.4
GABRA1-204ENST00000437025 KDM6AO15550 1401 aaPredicted RBP12.54□□□□□ -0.4
GABRA1-204ENST00000437025 EYA2O00167 538 aa12.54□□□□□ -0.4
GABRA1-204ENST00000437025 ISM2Q6H9L7 571 aa12.54□□□□□ -0.4
GABRA1-204ENST00000437025 CBX8Q9HC52 389 aa12.54□□□□□ -0.4
GABRA1-204ENST00000437025 CFAP45Q9UL16 551 aa12.54□□□□□ -0.4
GABRA1-204ENST00000437025 GOLGA8BA8MQT2 603 aa12.54□□□□□ -0.4
GABRA1-204ENST00000437025 BIN1O00499 593 aa12.54□□□□□ -0.4
GABRA1-204ENST00000437025 RFX5P48382 616 aaPredicted RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms