RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 KBTBD3Q8NAB2 608 aa20.08■□□□□ 0.81
USHBP1-203ENST00000431146 HELBQ8NG08 1087 aaPredicted RBP20.08■□□□□ 0.81
USHBP1-203ENST00000431146 QTRT2Q9H974 415 aaKnown RBP20.08■□□□□ 0.81
USHBP1-203ENST00000431146 SPEF2Q9C093 1822 aa20.08■□□□□ 0.8
USHBP1-203ENST00000431146 GNPATO15228 680 aa20.08■□□□□ 0.8
USHBP1-203ENST00000431146 ATP2B3Q16720 1220 aa20.08■□□□□ 0.8
USHBP1-203ENST00000431146 AMIGO3Q86WK7 504 aa20.08■□□□□ 0.8
USHBP1-203ENST00000431146 MAP4K1Q92918 833 aa20.08■□□□□ 0.8
USHBP1-203ENST00000431146 TMX3Q96JJ7 454 aa20.08■□□□□ 0.8
USHBP1-203ENST00000431146 FKBP4Q02790 459 aaKnown RBP eCLIP20.07■□□□□ 0.8
USHBP1-203ENST00000431146 SCARF1Q14162 830 aa20.07■□□□□ 0.8
USHBP1-203ENST00000431146 NECTIN1Q15223 517 aa20.07■□□□□ 0.8
USHBP1-203ENST00000431146 ADCK5Q3MIX3 580 aa20.07■□□□□ 0.8
USHBP1-203ENST00000431146 CCDC158Q5M9N0 1113 aa20.07■□□□□ 0.8
USHBP1-203ENST00000431146 SRP68Q9UHB9 627 aaKnown RBP20.07■□□□□ 0.8
USHBP1-203ENST00000431146 ONECUT3O60422 494 aaPredicted RBP20.06■□□□□ 0.8
USHBP1-203ENST00000431146 VGLL2Q8N8G2 317 aa20.06■□□□□ 0.8
USHBP1-203ENST00000431146 CASTP20810 708 aaKnown RBP20.06■□□□□ 0.8
USHBP1-203ENST00000431146 USPL1Q5W0Q7 1092 aa20.06■□□□□ 0.8
USHBP1-203ENST00000431146 PI16Q6UXB8 463 aa20.06■□□□□ 0.8
USHBP1-203ENST00000431146 AK7Q96M32 723 aa20.06■□□□□ 0.8
USHBP1-203ENST00000431146 CIZ1Q9ULV3 898 aaPredicted RBP20.06■□□□□ 0.8
USHBP1-203ENST00000431146 TAF1LQ8IZX4 1826 aa20.05■□□□□ 0.8
USHBP1-203ENST00000431146 TBC1D9BQ66K14 1250 aa20.05■□□□□ 0.8
USHBP1-203ENST00000431146 CREB3L3Q68CJ9 461 aa20.05■□□□□ 0.8
USHBP1-203ENST00000431146 CLEC4GQ6UXB4 293 aa20.05■□□□□ 0.8
USHBP1-203ENST00000431146 TNPO1Q92973 898 aaKnown RBP20.05■□□□□ 0.8
USHBP1-203ENST00000431146 LARP6Q9BRS8 491 aaKnown RBP20.05■□□□□ 0.8
USHBP1-203ENST00000431146 BCL2L12Q9HB09 334 aa20.05■□□□□ 0.8
USHBP1-203ENST00000431146 TAF5LO75529 589 aa20.05■□□□□ 0.8
USHBP1-203ENST00000431146 ERFEQ4G0M1 354 aa20.05■□□□□ 0.8
USHBP1-203ENST00000431146 JAKMIP1Q96N16 626 aaKnown RBP20.05■□□□□ 0.8
USHBP1-203ENST00000431146 LY75O60449 1722 aa20.05■□□□□ 0.8
USHBP1-203ENST00000431146 LAMB2P55268 1798 aa20.04■□□□□ 0.8
USHBP1-203ENST00000431146 SNAP23O00161 211 aa20.04■□□□□ 0.8
USHBP1-203ENST00000431146 RPS6KA4O75676 772 aa20.04■□□□□ 0.8
USHBP1-203ENST00000431146 TAF6LQ9Y6J9 622 aa20.04■□□□□ 0.8
USHBP1-203ENST00000431146 SCN7AQ01118 1682 aa20.04■□□□□ 0.8
USHBP1-203ENST00000431146 RFX7Q2KHR2 1363 aa20.03■□□□□ 0.8
USHBP1-203ENST00000431146 PDE8BO95263 885 aa20.03■□□□□ 0.8
USHBP1-203ENST00000431146 RAB3GAP1Q15042 981 aa20.03■□□□□ 0.8
USHBP1-203ENST00000431146 CCDC152Q4G0S7 254 aa20.03■□□□□ 0.8
USHBP1-203ENST00000431146 RC3H1Q5TC82 1133 aaKnown RBP20.03■□□□□ 0.8
USHBP1-203ENST00000431146 C3orf67Q6ZVT6 689 aa20.03■□□□□ 0.8
USHBP1-203ENST00000431146 TAF1P21675 1872 aa20.03■□□□□ 0.8
USHBP1-203ENST00000431146 COL4A1P02462 1669 aa20.03■□□□□ 0.8
USHBP1-203ENST00000431146 LRP5O75197 1615 aa20.03■□□□□ 0.8
USHBP1-203ENST00000431146 SLC27A2O14975 620 aa20.03■□□□□ 0.8
USHBP1-203ENST00000431146 SSFA2P28290 1259 aa20.03■□□□□ 0.8
USHBP1-203ENST00000431146 MCM2P49736 904 aa20.03■□□□□ 0.8
USHBP1-203ENST00000431146 COL9A3Q14050 684 aaPredicted RBP20.03■□□□□ 0.8
USHBP1-203ENST00000431146 MCMDC2Q4G0Z9 681 aa20.03■□□□□ 0.8
USHBP1-203ENST00000431146 MPHOSPH8Q99549 860 aa20.03■□□□□ 0.8
USHBP1-203ENST00000431146 MCM4P33991 863 aa20.02■□□□□ 0.8
USHBP1-203ENST00000431146 ZAP70P43403 619 aa20.02■□□□□ 0.8
USHBP1-203ENST00000431146 PKP1Q13835 747 aa20.02■□□□□ 0.8
USHBP1-203ENST00000431146 TTC14Q96N46 770 aa20.02■□□□□ 0.8
USHBP1-203ENST00000431146 CASZ1Q86V15 1759 aa20.02■□□□□ 0.8
USHBP1-203ENST00000431146 PHF14O94880 888 aa20.02■□□□□ 0.79
USHBP1-203ENST00000431146 AK2P54819 239 aa20.02■□□□□ 0.79
USHBP1-203ENST00000431146 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.02■□□□□ 0.79
USHBP1-203ENST00000431146 KCNB2Q92953 911 aa20.02■□□□□ 0.79
USHBP1-203ENST00000431146 NARFQ9UHQ1 456 aa20.02■□□□□ 0.79
USHBP1-203ENST00000431146 RTCBQ9Y3I0 505 aaKnown RBP20.02■□□□□ 0.79
USHBP1-203ENST00000431146 ZKSCAN1P17029 563 aaPredicted RBP20.01■□□□□ 0.79
USHBP1-203ENST00000431146 AKAP11Q9UKA4 1901 aa20.01■□□□□ 0.79
USHBP1-203ENST00000431146 BRWD3Q6RI45 1802 aa20.01■□□□□ 0.79
USHBP1-203ENST00000431146 ZPR1O75312 459 aa20■□□□□ 0.79
USHBP1-203ENST00000431146 MCAMP43121 646 aa20■□□□□ 0.79
USHBP1-203ENST00000431146 CCDC24Q8N4L8 307 aa20■□□□□ 0.79
USHBP1-203ENST00000431146 ARHGEF1Q92888 912 aaKnown RBP20■□□□□ 0.79
USHBP1-203ENST00000431146 MROH5Q6ZUA9 1318 aa20■□□□□ 0.79
USHBP1-203ENST00000431146 LRRC4BQ9NT99 713 aa20■□□□□ 0.79
USHBP1-203ENST00000431146 C4BP0C0L5 1744 aa19.99■□□□□ 0.79
USHBP1-203ENST00000431146 GTF2E1P29083 439 aaPredicted RBP19.99■□□□□ 0.79
USHBP1-203ENST00000431146 DEKP35659 375 aaKnown RBP19.99■□□□□ 0.79
USHBP1-203ENST00000431146 PHKA1P46020 1223 aa19.99■□□□□ 0.79
USHBP1-203ENST00000431146 PUM3Q15397 648 aaKnown RBP19.99■□□□□ 0.79
USHBP1-203ENST00000431146 VPS53Q5VIR6 699 aa19.99■□□□□ 0.79
USHBP1-203ENST00000431146 MYO5AQ9Y4I1 1855 aaKnown RBP19.99■□□□□ 0.79
USHBP1-203ENST00000431146 RNF113AO15541 343 aaKnown RBP19.99■□□□□ 0.79
USHBP1-203ENST00000431146 ZMYM1Q5SVZ6 1142 aa19.99■□□□□ 0.79
USHBP1-203ENST00000431146 RUFY3Q7L099 469 aa19.99■□□□□ 0.79
USHBP1-203ENST00000431146 PKNOX2Q96KN3 472 aa19.99■□□□□ 0.79
USHBP1-203ENST00000431146 BCL11BQ9C0K0 894 aaPredicted RBP19.99■□□□□ 0.79
USHBP1-203ENST00000431146 ZSWIM6Q9HCJ5 1215 aa19.99■□□□□ 0.79
USHBP1-203ENST00000431146 IGHMBP2P38935 993 aaKnown RBP19.98■□□□□ 0.79
USHBP1-203ENST00000431146 CUL4AQ13619 759 aa19.98■□□□□ 0.79
USHBP1-203ENST00000431146 CCDC102BQ68D86 513 aa19.98■□□□□ 0.79
USHBP1-203ENST00000431146 CYP46A1Q9Y6A2 500 aa19.98■□□□□ 0.79
USHBP1-203ENST00000431146 ABCC12Q96J65 1359 aa19.98■□□□□ 0.79
USHBP1-203ENST00000431146 HSP90B1P14625 803 aaKnown RBP19.97■□□□□ 0.79
USHBP1-203ENST00000431146 FGFR2P21802 821 aa19.97■□□□□ 0.79
USHBP1-203ENST00000431146 RNF20Q5VTR2 975 aa19.97■□□□□ 0.79
USHBP1-203ENST00000431146 FAM196AQ6ZSG2 479 aa19.97■□□□□ 0.79
USHBP1-203ENST00000431146 LPIN2Q92539 896 aa19.97■□□□□ 0.79
USHBP1-203ENST00000431146 SETDB2Q96T68 719 aa19.97■□□□□ 0.79
USHBP1-203ENST00000431146 CWC22Q9HCG8 908 aaKnown RBP19.97■□□□□ 0.79
USHBP1-203ENST00000431146 HELLSQ9NRZ9 838 aa19.97■□□□□ 0.79
USHBP1-203ENST00000431146 PDRG1Q9NUG6 133 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms