RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 UTYO14607 1347 aa15.86■□□□□ 0.13
USP42-203ENST00000426246 CREB3L3Q68CJ9 461 aa15.86■□□□□ 0.13
USP42-203ENST00000426246 PI4K2BQ8TCG2 481 aa15.86■□□□□ 0.13
USP42-203ENST00000426246 NCOA5Q9HCD5 579 aaKnown RBP15.86■□□□□ 0.13
USP42-203ENST00000426246 TRMT1Q9NXH9 659 aaKnown RBP15.86■□□□□ 0.13
USP42-203ENST00000426246 BECN2A8MW95 431 aa15.86■□□□□ 0.13
USP42-203ENST00000426246 NBPF26B4DH59 902 aa15.86■□□□□ 0.13
USP42-203ENST00000426246 IGKV5-2P06315 115 aa15.86■□□□□ 0.13
USP42-203ENST00000426246 TIMM10P62072 90 aa15.86■□□□□ 0.13
USP42-203ENST00000426246 KRT85P78386 507 aa15.86■□□□□ 0.13
USP42-203ENST00000426246 NBPF14Q5TI25 921 aa15.86■□□□□ 0.13
USP42-203ENST00000426246 OTUD7BQ6GQQ9 843 aa15.86■□□□□ 0.13
USP42-203ENST00000426246 NBPF10Q6P3W6 841 aaKnown RBP15.86■□□□□ 0.13
USP42-203ENST00000426246 NBPF15Q8N660 670 aa15.86■□□□□ 0.13
USP42-203ENST00000426246 SSH3Q8TE77 659 aa15.86■□□□□ 0.13
USP42-203ENST00000426246 NUP62CLQ9H1M0 184 aa15.86■□□□□ 0.13
USP42-203ENST00000426246 TOMM22Q9NS69 142 aa15.86■□□□□ 0.13
USP42-203ENST00000426246 BCL9O00512 1426 aa15.85■□□□□ 0.13
USP42-203ENST00000426246 BIN1O00499 593 aa15.85■□□□□ 0.13
USP42-203ENST00000426246 DDX58O95786 925 aaKnown RBP15.85■□□□□ 0.13
USP42-203ENST00000426246 PTGS1P23219 599 aa15.85■□□□□ 0.13
USP42-203ENST00000426246 LRMPQ12912 555 aa15.85■□□□□ 0.13
USP42-203ENST00000426246 SF3A1Q15459 793 aaKnown RBP15.85■□□□□ 0.13
USP42-203ENST00000426246 GOLIM4O00461 696 aa15.85■□□□□ 0.13
USP42-203ENST00000426246 ATP2B1P20020 1258 aa15.85■□□□□ 0.13
USP42-203ENST00000426246 POLA2Q14181 598 aa15.85■□□□□ 0.13
USP42-203ENST00000426246 NOLC1Q14978 699 aaKnown RBP eCLIP15.85■□□□□ 0.13
USP42-203ENST00000426246 HSP90AA4PQ58FG1 418 aa15.85■□□□□ 0.13
USP42-203ENST00000426246 PIGBQ92521 554 aa15.85■□□□□ 0.13
USP42-203ENST00000426246 DNAJC25Q9H1X3 360 aa15.85■□□□□ 0.13
USP42-203ENST00000426246 RAD50Q92878 1312 aa15.85■□□□□ 0.13
USP42-203ENST00000426246 SASS6Q6UVJ0 657 aa15.85■□□□□ 0.13
USP42-203ENST00000426246 ZNF589Q86UQ0 364 aaPredicted RBP15.85■□□□□ 0.13
USP42-203ENST00000426246 LSG1Q9H089 658 aaKnown RBP15.85■□□□□ 0.13
USP42-203ENST00000426246 A0A087WZG4 1122 aa15.84■□□□□ 0.13
USP42-203ENST00000426246 ALDH1L1O75891 902 aa15.84■□□□□ 0.13
USP42-203ENST00000426246 APPP05067 770 aa15.84■□□□□ 0.13
USP42-203ENST00000426246 TAF7LQ5H9L4 462 aa15.84■□□□□ 0.13
USP42-203ENST00000426246 TJP1Q07157 1748 aa15.84■□□□□ 0.13
USP42-203ENST00000426246 BCL9LQ86UU0 1499 aa15.84■□□□□ 0.13
USP42-203ENST00000426246 SPATA31A5Q5VU36 1347 aa15.84■□□□□ 0.13
USP42-203ENST00000426246 SPATA31A7Q8IWB4 1347 aa15.84■□□□□ 0.13
USP42-203ENST00000426246 SALL3Q9BXA9 1300 aa15.84■□□□□ 0.13
USP42-203ENST00000426246 GRM8O00222 908 aa15.83■□□□□ 0.13
USP42-203ENST00000426246 UBE2HP62256 183 aa15.83■□□□□ 0.13
USP42-203ENST00000426246 RNF20Q5VTR2 975 aa15.83■□□□□ 0.13
USP42-203ENST00000426246 KAZALD1Q96I82 304 aa15.83■□□□□ 0.13
USP42-203ENST00000426246 ZNF594Q96JF6 807 aaPredicted RBP15.83■□□□□ 0.13
USP42-203ENST00000426246 GOLGA6L19H0YKK7 550 aa15.83■□□□□ 0.12
USP42-203ENST00000426246 CCDC192P0DO97 292 aa15.83■□□□□ 0.12
USP42-203ENST00000426246 ANO6Q4KMQ2 910 aa15.83■□□□□ 0.12
USP42-203ENST00000426246 CCDC186Q7Z3E2 898 aa15.83■□□□□ 0.12
USP42-203ENST00000426246 CCDC82Q8N4S0 544 aa15.83■□□□□ 0.12
USP42-203ENST00000426246 NRBP1Q9UHY1 535 aa15.83■□□□□ 0.12
USP42-203ENST00000426246 UBAP1LF5GYI3 381 aa15.83■□□□□ 0.12
USP42-203ENST00000426246 POLR3DP05423 398 aaPredicted RBP15.83■□□□□ 0.12
USP42-203ENST00000426246 CSPP1Q1MSJ5 1256 aa15.83■□□□□ 0.12
USP42-203ENST00000426246 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.83■□□□□ 0.12
USP42-203ENST00000426246 TFCP2Q12800 502 aa15.82■□□□□ 0.12
USP42-203ENST00000426246 LINS1Q8NG48 757 aa15.82■□□□□ 0.12
USP42-203ENST00000426246 OSBPL3Q9H4L5 887 aa15.82■□□□□ 0.12
USP42-203ENST00000426246 THRAP3Q9Y2W1 955 aaKnown RBP15.82■□□□□ 0.12
USP42-203ENST00000426246 ME1P48163 572 aa15.82■□□□□ 0.12
USP42-203ENST00000426246 PTPN21Q16825 1174 aa15.82■□□□□ 0.12
USP42-203ENST00000426246 TTC6Q86TZ1 520 aa15.82■□□□□ 0.12
USP42-203ENST00000426246 CREBRFQ8IUR6 639 aa15.82■□□□□ 0.12
USP42-203ENST00000426246 CCDC144CPQ8IYA2 1237 aa15.82■□□□□ 0.12
USP42-203ENST00000426246 MTX1Q13505 466 aa15.82■□□□□ 0.12
USP42-203ENST00000426246 DBNDD2Q9BQY9 259 aa15.82■□□□□ 0.12
USP42-203ENST00000426246 ATG3Q9NT62 314 aa15.82■□□□□ 0.12
USP42-203ENST00000426246 ASAP1Q9ULH1 1129 aa15.82■□□□□ 0.12
USP42-203ENST00000426246 MAP3K11Q16584 847 aa15.81■□□□□ 0.12
USP42-203ENST00000426246 SDF4Q9BRK5 362 aa15.81■□□□□ 0.12
USP42-203ENST00000426246 ANAPC15P60006 121 aa15.81■□□□□ 0.12
USP42-203ENST00000426246 GNL2Q13823 731 aaKnown RBP15.81■□□□□ 0.12
USP42-203ENST00000426246 PYCARDQ9ULZ3 195 aa15.81■□□□□ 0.12
USP42-203ENST00000426246 CICQ96RK0 1608 aaPredicted RBP15.81■□□□□ 0.12
USP42-203ENST00000426246 RXRAP19793 462 aa15.81■□□□□ 0.12
USP42-203ENST00000426246 EPHA10Q5JZY3 1008 aa15.81■□□□□ 0.12
USP42-203ENST00000426246 TMOD3Q9NYL9 352 aa15.81■□□□□ 0.12
USP42-203ENST00000426246 MTMR6Q9Y217 621 aa15.81■□□□□ 0.12
USP42-203ENST00000426246 CUL4AQ13619 759 aa15.8■□□□□ 0.12
USP42-203ENST00000426246 Q6ZUG5 572 aa15.8■□□□□ 0.12
USP42-203ENST00000426246 METTL22Q9BUU2 404 aaPredicted RBP15.8■□□□□ 0.12
USP42-203ENST00000426246 CCDC171Q6TFL3 1326 aa15.8■□□□□ 0.12
USP42-203ENST00000426246 NUTM2BA6NNL0 878 aaPredicted RBP15.8■□□□□ 0.12
USP42-203ENST00000426246 NUTM2EB1AL46 878 aaPredicted RBP15.8■□□□□ 0.12
USP42-203ENST00000426246 APOBRQ0VD83 1088 aa15.8■□□□□ 0.12
USP42-203ENST00000426246 NUTM2AQ8IVF1 878 aaPredicted RBP15.8■□□□□ 0.12
USP42-203ENST00000426246 FAM177A1Q8N128 213 aaPredicted RBP15.8■□□□□ 0.12
USP42-203ENST00000426246 SLC4A9Q96Q91 983 aa15.8■□□□□ 0.12
USP42-203ENST00000426246 PDCL3Q9H2J4 239 aa15.8■□□□□ 0.12
USP42-203ENST00000426246 TMX1Q9H3N1 280 aa15.8■□□□□ 0.12
USP42-203ENST00000426246 NEURL1BA8MQ27 555 aa15.8■□□□□ 0.12
USP42-203ENST00000426246 SLC27A2O14975 620 aa15.8■□□□□ 0.12
USP42-203ENST00000426246 LMBR1LQ6UX01 489 aa15.8■□□□□ 0.12
USP42-203ENST00000426246 EVI5LQ96CN4 794 aa15.8■□□□□ 0.12
USP42-203ENST00000426246 INTS4Q96HW7 963 aaKnown RBP15.8■□□□□ 0.12
USP42-203ENST00000426246 TPD52L1Q16890 204 aaPredicted RBP15.79■□□□□ 0.12
USP42-203ENST00000426246 ANKRD13DQ6ZTN6 518 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms